RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 TBC1D20Q96BZ9 403 aa12.25□□□□□ -0.45
NPAS3-209ENST00000551008 WDR34Q96EX3 536 aa12.25□□□□□ -0.45
NPAS3-209ENST00000551008 TSPAN17Q96FV3 270 aa12.25□□□□□ -0.45
NPAS3-209ENST00000551008 QRFPRQ96P65 431 aa12.25□□□□□ -0.45
NPAS3-209ENST00000551008 ATOH8Q96SQ7 321 aa12.25□□□□□ -0.45
NPAS3-209ENST00000551008 SLX1AQ9BQ83 275 aa12.25□□□□□ -0.45
NPAS3-209ENST00000551008 SLC29A3Q9BZD2 475 aa12.25□□□□□ -0.45
NPAS3-209ENST00000551008 RNF32Q9H0A6 362 aa12.25□□□□□ -0.45
NPAS3-209ENST00000551008 DMGDHQ9UI17 866 aaKnown RBP12.25□□□□□ -0.45
NPAS3-209ENST00000551008 ZNF490Q9ULM2 529 aaPredicted RBP12.25□□□□□ -0.45
NPAS3-209ENST00000551008 EML6Q6ZMW3 1958 aa12.25□□□□□ -0.45
NPAS3-209ENST00000551008 PCNX1Q96RV3 2341 aa12.25□□□□□ -0.45
NPAS3-209ENST00000551008 A0A0G2JN53 185 aa12.24□□□□□ -0.45
NPAS3-209ENST00000551008 PABPN1LA6NDY0 278 aaKnown RBP12.24□□□□□ -0.45
NPAS3-209ENST00000551008 WIPF3A6NGB9 483 aa12.24□□□□□ -0.45
NPAS3-209ENST00000551008 SERPINA6P08185 405 aa12.24□□□□□ -0.45
NPAS3-209ENST00000551008 MTHFD2P13995 350 aa12.24□□□□□ -0.45
NPAS3-209ENST00000551008 ECHS1P30084 290 aa12.24□□□□□ -0.45
NPAS3-209ENST00000551008 AGTR2P50052 363 aa12.24□□□□□ -0.45
NPAS3-209ENST00000551008 HNRNPFP52597 415 aaKnown RBP12.24□□□□□ -0.45
NPAS3-209ENST00000551008 SLC12A2P55011 1212 aa12.24□□□□□ -0.45
NPAS3-209ENST00000551008 IRF9Q00978 393 aa12.24□□□□□ -0.45
NPAS3-209ENST00000551008 SRSF11Q05519 484 aaKnown RBP12.24□□□□□ -0.45
NPAS3-209ENST00000551008 RGS1Q08116 209 aa12.24□□□□□ -0.45
NPAS3-209ENST00000551008 RUNX2Q13950 521 aa12.24□□□□□ -0.45
NPAS3-209ENST00000551008 RBBP5Q15291 538 aaKnown RBP12.24□□□□□ -0.45
NPAS3-209ENST00000551008 BTBD16Q32M84 506 aa12.24□□□□□ -0.45
NPAS3-209ENST00000551008 ADPRMQ3LIE5 342 aa12.24□□□□□ -0.45
NPAS3-209ENST00000551008 CDKL4Q5MAI5 379 aa12.24□□□□□ -0.45
NPAS3-209ENST00000551008 GRTP1Q5TC63 336 aa12.24□□□□□ -0.45
NPAS3-209ENST00000551008 FHL5Q5TD97 284 aa12.24□□□□□ -0.45
NPAS3-209ENST00000551008 RPUSD3Q6P087 351 aaKnown RBP12.24□□□□□ -0.45
NPAS3-209ENST00000551008 CA13Q8N1Q1 262 aa12.24□□□□□ -0.45
NPAS3-209ENST00000551008 TMEM52Q8NDY8 209 aa12.24□□□□□ -0.45
NPAS3-209ENST00000551008 TRPV3Q8NET8 790 aa12.24□□□□□ -0.45
NPAS3-209ENST00000551008 OR1N1Q8NGS0 311 aa12.24□□□□□ -0.45
NPAS3-209ENST00000551008 FAR1Q8WVX9 515 aa12.24□□□□□ -0.45
NPAS3-209ENST00000551008 METTL21AQ8WXB1 218 aa12.24□□□□□ -0.45
NPAS3-209ENST00000551008 MS4A6EQ96DS6 147 aa12.24□□□□□ -0.45
NPAS3-209ENST00000551008 NECTIN3Q9NQS3 549 aa12.24□□□□□ -0.45
NPAS3-209ENST00000551008 WWOXQ9NZC7 414 aa12.24□□□□□ -0.45
NPAS3-209ENST00000551008 NINJ2Q9NZG7 142 aa12.24□□□□□ -0.45
NPAS3-209ENST00000551008 LRIT2A6NDA9 550 aa12.23□□□□□ -0.45
NPAS3-209ENST00000551008 ANKUB1A6NFN9 424 aa12.23□□□□□ -0.45
NPAS3-209ENST00000551008 B4GALT2O60909 372 aa12.23□□□□□ -0.45
NPAS3-209ENST00000551008 AGFG2O95081 481 aa12.23□□□□□ -0.45
NPAS3-209ENST00000551008 LDLRP01130 860 aa12.23□□□□□ -0.45
NPAS3-209ENST00000551008 GP1BBP13224 206 aa12.23□□□□□ -0.45
NPAS3-209ENST00000551008 GNAZP19086 355 aa12.23□□□□□ -0.45
NPAS3-209ENST00000551008 TFEBP19484 476 aa12.23□□□□□ -0.45
NPAS3-209ENST00000551008 MAOAP21397 527 aa12.23□□□□□ -0.45
NPAS3-209ENST00000551008 IL10P22301 178 aa12.23□□□□□ -0.45
NPAS3-209ENST00000551008 STX2P32856 288 aa12.23□□□□□ -0.45
NPAS3-209ENST00000551008 SPRP35270 261 aaPredicted RBP12.23□□□□□ -0.45
NPAS3-209ENST00000551008 SLC26A5P58743 744 aa12.23□□□□□ -0.45
NPAS3-209ENST00000551008 ATP6V0D1P61421 351 aa12.23□□□□□ -0.45
NPAS3-209ENST00000551008 ARG2P78540 354 aa12.23□□□□□ -0.45
NPAS3-209ENST00000551008 ILF2Q12905 390 aaKnown RBP12.23□□□□□ -0.45
NPAS3-209ENST00000551008 BMPR2Q13873 1038 aa12.23□□□□□ -0.45
NPAS3-209ENST00000551008 DOC2AQ14183 400 aa12.23□□□□□ -0.45
NPAS3-209ENST00000551008 NSDHLQ15738 373 aa12.23□□□□□ -0.45
NPAS3-209ENST00000551008 SULT1C3Q6IMI6 304 aa12.23□□□□□ -0.45
NPAS3-209ENST00000551008 C8orf74Q6P047 294 aa12.23□□□□□ -0.45
NPAS3-209ENST00000551008 TMIGD1Q6UXZ0 262 aa12.23□□□□□ -0.45
NPAS3-209ENST00000551008 QSOX2Q6ZRP7 698 aa12.23□□□□□ -0.45
NPAS3-209ENST00000551008 ABHD13Q7L211 337 aa12.23□□□□□ -0.45
NPAS3-209ENST00000551008 CRLF3Q8IUI8 442 aa12.23□□□□□ -0.45
NPAS3-209ENST00000551008 BEST3Q8N1M1 668 aa12.23□□□□□ -0.45
NPAS3-209ENST00000551008 KIF2BQ8N4N8 673 aa12.23□□□□□ -0.45
NPAS3-209ENST00000551008 ST6GALNAC3Q8NDV1 305 aa12.23□□□□□ -0.45
NPAS3-209ENST00000551008 NFAM1Q8NET5 270 aaPredicted RBP12.23□□□□□ -0.45
NPAS3-209ENST00000551008 PRR7Q8TB68 274 aa12.23□□□□□ -0.45
NPAS3-209ENST00000551008 SSC4DQ8WTU2 575 aa12.23□□□□□ -0.45
NPAS3-209ENST00000551008 KCTD4Q8WVF5 259 aa12.23□□□□□ -0.45
NPAS3-209ENST00000551008 EXT2Q93063 718 aa12.23□□□□□ -0.45
NPAS3-209ENST00000551008 NXNL1Q96CM4 212 aa12.23□□□□□ -0.45
NPAS3-209ENST00000551008 EHD1Q9H4M9 534 aa12.23□□□□□ -0.45
NPAS3-209ENST00000551008 ALG9Q9H6U8 611 aa12.23□□□□□ -0.45
NPAS3-209ENST00000551008 NT5DC2Q9H857 520 aa12.23□□□□□ -0.45
NPAS3-209ENST00000551008 MMP25Q9NPA2 562 aa12.23□□□□□ -0.45
NPAS3-209ENST00000551008 DNAJC11Q9NVH1 559 aa12.23□□□□□ -0.45
NPAS3-209ENST00000551008 GPRC5BQ9NZH0 403 aa12.23□□□□□ -0.45
NPAS3-209ENST00000551008 TXNDC16Q9P2K2 825 aa12.23□□□□□ -0.45
NPAS3-209ENST00000551008 C19orf25Q9UFG5 118 aaPredicted RBP12.23□□□□□ -0.45
NPAS3-209ENST00000551008 GTF3C1Q12789 2109 aa12.23□□□□□ -0.45
NPAS3-209ENST00000551008 TCRBV16S1A1N1A0A5B0 115 aa12.22□□□□□ -0.45
NPAS3-209ENST00000551008 OR5H15A6NDH6 313 aa12.22□□□□□ -0.45
NPAS3-209ENST00000551008 UBXN8O00124 270 aa12.22□□□□□ -0.45
NPAS3-209ENST00000551008 STK16O75716 305 aa12.22□□□□□ -0.45
NPAS3-209ENST00000551008 WFS1O76024 890 aa12.22□□□□□ -0.45
NPAS3-209ENST00000551008 URI1O94763 535 aaPredicted RBP12.22□□□□□ -0.45
NPAS3-209ENST00000551008 ZNF33BQ06732 778 aa12.22□□□□□ -0.45
NPAS3-209ENST00000551008 CKAP4Q07065 602 aaKnown RBP12.22□□□□□ -0.45
NPAS3-209ENST00000551008 NAB1Q13506 487 aa12.22□□□□□ -0.45
NPAS3-209ENST00000551008 SLMAPQ14BN4 828 aa12.22□□□□□ -0.45
NPAS3-209ENST00000551008 UBE3DQ7Z6J8 389 aa12.22□□□□□ -0.45
NPAS3-209ENST00000551008 ZNF227Q86WZ6 799 aa12.22□□□□□ -0.45
NPAS3-209ENST00000551008 SCUBE1Q8IWY4 988 aa12.22□□□□□ -0.45
NPAS3-209ENST00000551008 TCAIMQ8N3R3 496 aa12.22□□□□□ -0.45
NPAS3-209ENST00000551008 MMGT1Q8N4V1 131 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms