RNA–Protein interactions for RNA: ENST00000550847.1

RAB3IP-214, Transcript of RAB3A interacting protein, humanhuman

TSL 3 BASIC

Gene RAB3IP, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-214ENST00000550847 CROCCP3Q8IVE0 287 aa4.23□□□□□ -1.73
RAB3IP-214ENST00000550847 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.23□□□□□ -1.73
RAB3IP-214ENST00000550847 ZNF34Q8IZ26 560 aa4.23□□□□□ -1.73
RAB3IP-214ENST00000550847 CCDC63Q8NA47 563 aa4.23□□□□□ -1.73
RAB3IP-214ENST00000550847 STKLD1Q8NE28 680 aa4.23□□□□□ -1.73
RAB3IP-214ENST00000550847 TRIM58Q8NG06 486 aa4.23□□□□□ -1.73
RAB3IP-214ENST00000550847 OR2T3Q8NH03 318 aa4.23□□□□□ -1.73
RAB3IP-214ENST00000550847 IRGQQ8WZA9 623 aa4.23□□□□□ -1.73
RAB3IP-214ENST00000550847 PIGTQ969N2 578 aa4.23□□□□□ -1.73
RAB3IP-214ENST00000550847 RFT1Q96AA3 541 aa4.23□□□□□ -1.73
RAB3IP-214ENST00000550847 RPGRIP1Q96KN7 1286 aa4.23□□□□□ -1.73
RAB3IP-214ENST00000550847 FAM20AQ96MK3 541 aa4.23□□□□□ -1.73
RAB3IP-214ENST00000550847 ZNF583Q96ND8 569 aa4.23□□□□□ -1.73
RAB3IP-214ENST00000550847 CCT7Q99832 543 aa4.23□□□□□ -1.73
RAB3IP-214ENST00000550847 TRMT61BQ9BVS5 477 aaKnown RBP4.23□□□□□ -1.73
RAB3IP-214ENST00000550847 C10orf88Q9H8K7 445 aa4.23□□□□□ -1.73
RAB3IP-214ENST00000550847 ZNF556Q9HAH1 456 aa4.23□□□□□ -1.73
RAB3IP-214ENST00000550847 FAM207AQ9NSI2 230 aaPredicted RBP4.23□□□□□ -1.73
RAB3IP-214ENST00000550847 ACOXLQ9NUZ1 547 aa4.23□□□□□ -1.73
RAB3IP-214ENST00000550847 C1RLQ9NZP8 487 aa4.23□□□□□ -1.73
RAB3IP-214ENST00000550847 NARFQ9UHQ1 456 aa4.23□□□□□ -1.73
RAB3IP-214ENST00000550847 AGO1Q9UL18 857 aaKnown RBP4.23□□□□□ -1.73
RAB3IP-214ENST00000550847 MRPS2Q9Y399 296 aaKnown RBP4.23□□□□□ -1.73
RAB3IP-214ENST00000550847 C2CD2Q9Y426 696 aa4.23□□□□□ -1.73
RAB3IP-214ENST00000550847 K7EQM0 130 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 GAPDHSO14556 408 aaPredicted RBP4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 ARPC2O15144 300 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 RAF1P04049 648 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 ASNSP08243 561 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 CSF2RAP15509 400 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 JAK1P23458 1154 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 DGKAP23743 735 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 FCARP24071 287 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 MNDAP41218 407 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 NKX2-1P43699 371 aaPredicted RBP4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 CCL11P51671 97 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 SEC61A1P61619 476 aaKnown RBP4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 RPP38P78345 283 aaKnown RBP4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 PDE1BQ01064 536 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 KLC1Q07866 573 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 FUT7Q11130 342 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 MYBPHQ13203 477 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 DMP1Q13316 513 aaPredicted RBP4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 MXD4Q14582 209 aaPredicted RBP4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 ZMYND11Q15326 602 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 IMMTQ16891 758 aaKnown RBP4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 USH1GQ495M9 461 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 CFAP221Q4G0U5 840 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 UGT3A1Q6NUS8 523 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 ZNF704Q6ZNC4 412 aaPredicted RBP4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 Q6ZTC4 211 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 TAS2R42Q7RTR8 314 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 LRRC70Q7Z2Q7 622 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 NR2C2APQ86WQ0 139 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 GRAMD2AQ8IUY3 354 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 GBGT1Q8N5D6 347 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 NOA1Q8NC60 698 aaKnown RBP4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 OR10Q1Q8NGQ4 319 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 CHPT1Q8WUD6 406 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 PHF21AQ96BD5 680 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 TMEM19Q96HH6 336 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 SGK494Q96LW2 274 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 GPR137Q96N19 417 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 PSKH2Q96QS6 385 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 ZNF607Q96SK3 696 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 SECISBP2Q96T21 854 aaKnown RBP4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 NDNQ99608 321 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 SLC25A33Q9BSK2 321 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 MRPL13Q9BYD1 178 aaKnown RBP4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 LRRC2Q9BYS8 371 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 THAP2Q9H0W7 228 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 LRMDAQ9H2I8 198 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 DCLRE1BQ9H816 532 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 COG4Q9H9E3 785 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 UPF2Q9HAU5 1272 aaKnown RBP4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 NOX4Q9NPH5 578 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 TRPV5Q9NQA5 729 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 RBM28Q9NW13 759 aaKnown RBP4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 SPHK1Q9NYA1 384 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 GTSE1Q9NYZ3 720 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 COPS7AQ9UBW8 275 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 PSORS1C1Q9UIG5 152 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 TNNQ9UQP3 1299 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 SPACA6W5XKT8 324 aa4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 MYH14Q7Z406 1995 aaKnown RBP4.22□□□□□ -1.73
RAB3IP-214ENST00000550847 ABCC4O15439 1325 aa4.21□□□□□ -1.73
RAB3IP-214ENST00000550847 TEX13DA0A0J9YY54 714 aaPredicted RBP4.21□□□□□ -1.74
RAB3IP-214ENST00000550847 H3BMM5 538 aa4.21□□□□□ -1.74
RAB3IP-214ENST00000550847 BOLA2-SMG1P6H3BVE0 249 aa4.21□□□□□ -1.74
RAB3IP-214ENST00000550847 M0R296 226 aa4.21□□□□□ -1.74
RAB3IP-214ENST00000550847 ZNF197O14709 1029 aa4.21□□□□□ -1.74
RAB3IP-214ENST00000550847 SLC22A2O15244 555 aa4.21□□□□□ -1.74
RAB3IP-214ENST00000550847 KCNJ13O60928 360 aa4.21□□□□□ -1.74
RAB3IP-214ENST00000550847 GMNNO75496 209 aa4.21□□□□□ -1.74
RAB3IP-214ENST00000550847 RFPL2O75678 378 aa4.21□□□□□ -1.74
RAB3IP-214ENST00000550847 SURF6O75683 361 aaKnown RBP4.21□□□□□ -1.74
RAB3IP-214ENST00000550847 GAGE7O76087 117 aa4.21□□□□□ -1.74
RAB3IP-214ENST00000550847 PIGNO95427 931 aa4.21□□□□□ -1.74
RAB3IP-214ENST00000550847 GAGE12FP0CL80 117 aa4.21□□□□□ -1.74
RAB3IP-214ENST00000550847 GAGE12GP0CL81 117 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms