RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 TRBC2A0A5B9 178 aa9.2□□□□□ -0.94
TRAFD1-207ENST00000550051 SAGE2PA6NJ88 616 aa9.2□□□□□ -0.94
TRAFD1-207ENST00000550051 USP27XA6NNY8 438 aa9.2□□□□□ -0.94
TRAFD1-207ENST00000550051 TFECO14948 347 aaPredicted RBP9.2□□□□□ -0.94
TRAFD1-207ENST00000550051 HS6ST1O60243 411 aa9.2□□□□□ -0.94
TRAFD1-207ENST00000550051 CEP104O60308 925 aa9.2□□□□□ -0.94
TRAFD1-207ENST00000550051 B4GALT2O60909 372 aa9.2□□□□□ -0.94
TRAFD1-207ENST00000550051 HAUS5O94927 633 aa9.2□□□□□ -0.94
TRAFD1-207ENST00000550051 SMIM10L1P0DMW3 83 aa9.2□□□□□ -0.94
TRAFD1-207ENST00000550051 CDH1P12830 882 aa9.2□□□□□ -0.94
TRAFD1-207ENST00000550051 CD99P14209 185 aa9.2□□□□□ -0.94
TRAFD1-207ENST00000550051 DNAJA1P31689 397 aaKnown RBP9.2□□□□□ -0.94
TRAFD1-207ENST00000550051 KCNJ1P48048 391 aa9.2□□□□□ -0.94
TRAFD1-207ENST00000550051 MEOX1P50221 254 aa9.2□□□□□ -0.94
TRAFD1-207ENST00000550051 CCR8P51685 355 aa9.2□□□□□ -0.94
TRAFD1-207ENST00000550051 BTG2P78543 158 aa9.2□□□□□ -0.94
TRAFD1-207ENST00000550051 TIAL1Q01085 375 aaKnown RBP eCLIP9.2□□□□□ -0.94
TRAFD1-207ENST00000550051 NAE1Q13564 534 aa9.2□□□□□ -0.94
TRAFD1-207ENST00000550051 DEFB134Q4QY38 66 aa9.2□□□□□ -0.94
TRAFD1-207ENST00000550051 EMC4Q5J8M3 183 aa9.2□□□□□ -0.94
TRAFD1-207ENST00000550051 UGT3A1Q6NUS8 523 aa9.2□□□□□ -0.94
TRAFD1-207ENST00000550051 PAOXQ6QHF9 649 aa9.2□□□□□ -0.94
TRAFD1-207ENST00000550051 ACAD11Q709F0 780 aa9.2□□□□□ -0.94
TRAFD1-207ENST00000550051 PIWIL4Q7Z3Z4 852 aaKnown RBP9.2□□□□□ -0.94
TRAFD1-207ENST00000550051 CD163Q86VB7 1156 aa9.2□□□□□ -0.94
TRAFD1-207ENST00000550051 SPNS2Q8IVW8 549 aa9.2□□□□□ -0.94
TRAFD1-207ENST00000550051 CYP4X1Q8N118 509 aa9.2□□□□□ -0.94
TRAFD1-207ENST00000550051 NT5CQ8TCD5 201 aa9.2□□□□□ -0.94
TRAFD1-207ENST00000550051 EEF1AKMT1Q8WVE0 214 aa9.2□□□□□ -0.94
TRAFD1-207ENST00000550051 SMIM10Q96HG1 83 aa9.2□□□□□ -0.94
TRAFD1-207ENST00000550051 FOXC2Q99958 501 aa9.2□□□□□ -0.94
TRAFD1-207ENST00000550051 ZNF559Q9BR84 538 aa9.2□□□□□ -0.94
TRAFD1-207ENST00000550051 AARSD1Q9BTE6 412 aaKnown RBP9.2□□□□□ -0.94
TRAFD1-207ENST00000550051 RBCK1Q9BYM8 510 aa9.2□□□□□ -0.94
TRAFD1-207ENST00000550051 DEFB126Q9BYW3 111 aa9.2□□□□□ -0.94
TRAFD1-207ENST00000550051 UCK2Q9BZX2 261 aa9.2□□□□□ -0.94
TRAFD1-207ENST00000550051 ATG10Q9H0Y0 220 aa9.2□□□□□ -0.94
TRAFD1-207ENST00000550051 PRDM9Q9NQV7 894 aa9.2□□□□□ -0.94
TRAFD1-207ENST00000550051 FBXO6Q9NRD1 293 aaPredicted RBP9.2□□□□□ -0.94
TRAFD1-207ENST00000550051 ADAMTS6Q9UKP5 1117 aa9.2□□□□□ -0.94
TRAFD1-207ENST00000550051 FBXO5Q9UKT4 447 aa9.2□□□□□ -0.94
TRAFD1-207ENST00000550051 PPIEQ9UNP9 301 aaKnown RBP9.2□□□□□ -0.94
TRAFD1-207ENST00000550051 NIPBLQ6KC79 2804 aaeCLIP9.19□□□□□ -0.94
TRAFD1-207ENST00000550051 PRRC2AP48634 2157 aaKnown RBP9.19□□□□□ -0.94
TRAFD1-207ENST00000550051 ZNF407Q9C0G0 2248 aa9.19□□□□□ -0.94
TRAFD1-207ENST00000550051 NKX2-6A6NCS4 301 aa9.19□□□□□ -0.94
TRAFD1-207ENST00000550051 ZNF860A6NHJ4 632 aa9.19□□□□□ -0.94
TRAFD1-207ENST00000550051 NDUFS4O43181 175 aa9.19□□□□□ -0.94
TRAFD1-207ENST00000550051 OR1F1O43749 312 aa9.19□□□□□ -0.94
TRAFD1-207ENST00000550051 KLK8O60259 260 aa9.19□□□□□ -0.94
TRAFD1-207ENST00000550051 HOXB4P17483 251 aaPredicted RBP9.19□□□□□ -0.94
TRAFD1-207ENST00000550051 AHRP35869 848 aa9.19□□□□□ -0.94
TRAFD1-207ENST00000550051 RGS4P49798 205 aa9.19□□□□□ -0.94
TRAFD1-207ENST00000550051 CLCN2P51788 898 aa9.19□□□□□ -0.94
TRAFD1-207ENST00000550051 GPR143P51810 404 aa9.19□□□□□ -0.94
TRAFD1-207ENST00000550051 IST1P53990 364 aa9.19□□□□□ -0.94
TRAFD1-207ENST00000550051 PMPCAQ10713 525 aa9.19□□□□□ -0.94
TRAFD1-207ENST00000550051 SP140Q13342 867 aa9.19□□□□□ -0.94
TRAFD1-207ENST00000550051 TERF2Q15554 542 aa9.19□□□□□ -0.94
TRAFD1-207ENST00000550051 DUPD1Q68J44 220 aa9.19□□□□□ -0.94
TRAFD1-207ENST00000550051 CASC4Q6P4E1 433 aa9.19□□□□□ -0.94
TRAFD1-207ENST00000550051 RGS9BPQ6ZS82 235 aa9.19□□□□□ -0.94
TRAFD1-207ENST00000550051 ABHD13Q7L211 337 aa9.19□□□□□ -0.94
TRAFD1-207ENST00000550051 MDGA2Q7Z553 956 aa9.19□□□□□ -0.94
TRAFD1-207ENST00000550051 PALM2Q8IXS6 379 aa9.19□□□□□ -0.94
TRAFD1-207ENST00000550051 CLYBLQ8N0X4 340 aa9.19□□□□□ -0.94
TRAFD1-207ENST00000550051 TBC1D19Q8N5T2 526 aa9.19□□□□□ -0.94
TRAFD1-207ENST00000550051 APCDD1LQ8NCL9 501 aa9.19□□□□□ -0.94
TRAFD1-207ENST00000550051 MCUQ8NE86 351 aa9.19□□□□□ -0.94
TRAFD1-207ENST00000550051 B3GNT7Q8NFL0 401 aa9.19□□□□□ -0.94
TRAFD1-207ENST00000550051 OR52N2Q8NGI0 321 aa9.19□□□□□ -0.94
TRAFD1-207ENST00000550051 OR56A3Q8NH54 315 aa9.19□□□□□ -0.94
TRAFD1-207ENST00000550051 CALML6Q8TD86 181 aa9.19□□□□□ -0.94
TRAFD1-207ENST00000550051 UTP15Q8TED0 518 aaKnown RBP9.19□□□□□ -0.94
TRAFD1-207ENST00000550051 NINJ1Q92982 152 aa9.19□□□□□ -0.94
TRAFD1-207ENST00000550051 SNF8Q96H20 258 aa9.19□□□□□ -0.94
TRAFD1-207ENST00000550051 DESI2Q9BSY9 194 aa9.19□□□□□ -0.94
TRAFD1-207ENST00000550051 NECTIN3Q9NQS3 549 aa9.19□□□□□ -0.94
TRAFD1-207ENST00000550051 SAMD15Q9P1V8 674 aa9.19□□□□□ -0.94
TRAFD1-207ENST00000550051 ZFATQ9P243 1243 aa9.19□□□□□ -0.94
TRAFD1-207ENST00000550051 ZFP69BQ9UJL9 534 aa9.19□□□□□ -0.94
TRAFD1-207ENST00000550051 DNAJC13O75165 2243 aa9.19□□□□□ -0.94
TRAFD1-207ENST00000550051 OR14I1A6ND48 311 aa9.18□□□□□ -0.94
TRAFD1-207ENST00000550051 URADA6NGE7 173 aa9.18□□□□□ -0.94
TRAFD1-207ENST00000550051 CDC40O60508 579 aaKnown RBP eCLIP9.18□□□□□ -0.94
TRAFD1-207ENST00000550051 ITGA10O75578 1167 aa9.18□□□□□ -0.94
TRAFD1-207ENST00000550051 PDE9AO76083 593 aa9.18□□□□□ -0.94
TRAFD1-207ENST00000550051 B3GALT4O96024 378 aa9.18□□□□□ -0.94
TRAFD1-207ENST00000550051 HIST1H2AGP0C0S8 130 aaPredicted RBP9.18□□□□□ -0.94
TRAFD1-207ENST00000550051 ZNF888P0CJ79 500 aaPredicted RBP9.18□□□□□ -0.94
TRAFD1-207ENST00000550051 RNH1P13489 461 aaKnown RBP9.18□□□□□ -0.94
TRAFD1-207ENST00000550051 HIST1H2ADP20671 130 aa9.18□□□□□ -0.94
TRAFD1-207ENST00000550051 MAOAP21397 527 aa9.18□□□□□ -0.94
TRAFD1-207ENST00000550051 RFC3P40938 356 aa9.18□□□□□ -0.94
TRAFD1-207ENST00000550051 SLC1A2P43004 574 aa9.18□□□□□ -0.94
TRAFD1-207ENST00000550051 SCTRP47872 440 aa9.18□□□□□ -0.94
TRAFD1-207ENST00000550051 NUP107P57740 925 aa9.18□□□□□ -0.94
TRAFD1-207ENST00000550051 OLR1P78380 273 aa9.18□□□□□ -0.94
TRAFD1-207ENST00000550051 RGS1Q08116 209 aa9.18□□□□□ -0.94
TRAFD1-207ENST00000550051 BBS9Q3SYG4 887 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms