RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 AGRPO00253 132 aa13.57□□□□□ -0.24
RAPGEF3-218ENST00000548919 AP3D1O14617 1153 aa13.57□□□□□ -0.24
RAPGEF3-218ENST00000548919 ZW10O43264 779 aa13.57□□□□□ -0.24
RAPGEF3-218ENST00000548919 PRAMEF10O60809 474 aa13.57□□□□□ -0.24
RAPGEF3-218ENST00000548919 CCNKO75909 580 aa13.57□□□□□ -0.24
RAPGEF3-218ENST00000548919 ANXA8P13928 327 aa13.57□□□□□ -0.24
RAPGEF3-218ENST00000548919 PIK3CBP42338 1070 aa13.57□□□□□ -0.24
RAPGEF3-218ENST00000548919 RPS13P62277 151 aaKnown RBP13.57□□□□□ -0.24
RAPGEF3-218ENST00000548919 CYP4F8P98187 520 aa13.57□□□□□ -0.24
RAPGEF3-218ENST00000548919 TSTA3Q13630 321 aaPredicted RBP13.57□□□□□ -0.24
RAPGEF3-218ENST00000548919 SCARB2Q14108 478 aa13.57□□□□□ -0.24
RAPGEF3-218ENST00000548919 IRF3Q14653 427 aa13.57□□□□□ -0.24
RAPGEF3-218ENST00000548919 FBXO43Q4G163 708 aa13.57□□□□□ -0.24
RAPGEF3-218ENST00000548919 AGTRAPQ6RW13 159 aa13.57□□□□□ -0.24
RAPGEF3-218ENST00000548919 IL17RDQ8NFM7 739 aa13.57□□□□□ -0.24
RAPGEF3-218ENST00000548919 OR7G3Q8NG95 312 aa13.57□□□□□ -0.24
RAPGEF3-218ENST00000548919 AUTS2Q8WXX7 1259 aa13.57□□□□□ -0.24
RAPGEF3-218ENST00000548919 MGLLQ99685 303 aa13.57□□□□□ -0.24
RAPGEF3-218ENST00000548919 SLC35A5Q9BS91 424 aa13.57□□□□□ -0.24
RAPGEF3-218ENST00000548919 PEX16Q9Y5Y5 336 aa13.57□□□□□ -0.24
RAPGEF3-218ENST00000548919 LOC110117498-PIK3R3F6TDL0 507 aa13.56□□□□□ -0.24
RAPGEF3-218ENST00000548919 H3BM21 787 aa13.56□□□□□ -0.24
RAPGEF3-218ENST00000548919 EIF3FO00303 357 aaPredicted RBP13.56□□□□□ -0.24
RAPGEF3-218ENST00000548919 ARHGAP33O14559 1287 aa13.56□□□□□ -0.24
RAPGEF3-218ENST00000548919 SGTAO43765 313 aa13.56□□□□□ -0.24
RAPGEF3-218ENST00000548919 SLC16A8O95907 504 aa13.56□□□□□ -0.24
RAPGEF3-218ENST00000548919 SELPP16109 830 aa13.56□□□□□ -0.24
RAPGEF3-218ENST00000548919 CSNK1DP48730 415 aa13.56□□□□□ -0.24
RAPGEF3-218ENST00000548919 PXNP49023 591 aaPredicted RBP13.56□□□□□ -0.24
RAPGEF3-218ENST00000548919 SP140Q13342 867 aa13.56□□□□□ -0.24
RAPGEF3-218ENST00000548919 VEPH1Q14D04 833 aa13.56□□□□□ -0.24
RAPGEF3-218ENST00000548919 TEAD4Q15561 434 aa13.56□□□□□ -0.24
RAPGEF3-218ENST00000548919 PLEKHS1Q5SXH7 462 aa13.56□□□□□ -0.24
RAPGEF3-218ENST00000548919 NXNL2Q5VZ03 156 aa13.56□□□□□ -0.24
RAPGEF3-218ENST00000548919 DPY19L3Q6ZPD9 716 aa13.56□□□□□ -0.24
RAPGEF3-218ENST00000548919 CHST14Q8NCH0 376 aa13.56□□□□□ -0.24
RAPGEF3-218ENST00000548919 DENND6BQ8NEG7 585 aa13.56□□□□□ -0.24
RAPGEF3-218ENST00000548919 CEP44Q9C0F1 390 aa13.56□□□□□ -0.24
RAPGEF3-218ENST00000548919 ACER3Q9NUN7 267 aa13.56□□□□□ -0.24
RAPGEF3-218ENST00000548919 PCM1Q15154 2024 aa13.56□□□□□ -0.24
RAPGEF3-218ENST00000548919 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.56□□□□□ -0.24
RAPGEF3-218ENST00000548919 TNFRSF21O75509 655 aa13.56□□□□□ -0.24
RAPGEF3-218ENST00000548919 ABLIM3O94929 683 aa13.56□□□□□ -0.24
RAPGEF3-218ENST00000548919 ZNF24P17028 368 aa13.56□□□□□ -0.24
RAPGEF3-218ENST00000548919 PRIM2P49643 509 aa13.56□□□□□ -0.24
RAPGEF3-218ENST00000548919 SNRPD1P62314 119 aaKnown RBP13.56□□□□□ -0.24
RAPGEF3-218ENST00000548919 SSX1Q16384 188 aa13.56□□□□□ -0.24
RAPGEF3-218ENST00000548919 BCL7AQ4VC05 210 aa13.56□□□□□ -0.24
RAPGEF3-218ENST00000548919 ATCAYQ86WG3 371 aa13.56□□□□□ -0.24
RAPGEF3-218ENST00000548919 CMTM8Q8IZV2 173 aa13.56□□□□□ -0.24
RAPGEF3-218ENST00000548919 OR8H2Q8N162 312 aa13.56□□□□□ -0.24
RAPGEF3-218ENST00000548919 AQP11Q8NBQ7 271 aa13.56□□□□□ -0.24
RAPGEF3-218ENST00000548919 WDR36Q8NI36 951 aaKnown RBP13.56□□□□□ -0.24
RAPGEF3-218ENST00000548919 CLP1Q92989 425 aaKnown RBP13.56□□□□□ -0.24
RAPGEF3-218ENST00000548919 IL4I1Q96RQ9 567 aa13.56□□□□□ -0.24
RAPGEF3-218ENST00000548919 C19orf43Q9BQ61 176 aa13.56□□□□□ -0.24
RAPGEF3-218ENST00000548919 SPATA9Q9BWV2 254 aa13.56□□□□□ -0.24
RAPGEF3-218ENST00000548919 ZNF556Q9HAH1 456 aa13.56□□□□□ -0.24
RAPGEF3-218ENST00000548919 CFAP97Q9P2B7 532 aa13.56□□□□□ -0.24
RAPGEF3-218ENST00000548919 STOX2Q9P2F5 926 aaPredicted RBP13.56□□□□□ -0.24
RAPGEF3-218ENST00000548919 CORO2BQ9UQ03 480 aa13.56□□□□□ -0.24
RAPGEF3-218ENST00000548919 THSD7BQ9C0I4 1608 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 LINC00854A0A1B0GVQ3 168 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 A0A1W2PQ45 241 aaPredicted RBP13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 A0A1W2PQY0 241 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 A8MV72 311 aaPredicted RBP13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 GPX5O75715 221 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 SLC10A3P09131 477 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 SOX6P35712 828 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 FEN1P39748 380 aaKnown RBP13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 SOX3P41225 446 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 TGM4P49221 684 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 GPR162Q16538 588 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 LEXMQ3ZCV2 418 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 ANXA8L1Q5VT79 327 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 GRHL2Q6ISB3 625 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 CCDC190Q86UF4 302 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 RNF130Q86XS8 419 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 FAM217AQ8IXS0 508 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 DEPDC4Q8N2C3 294 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 VANGL1Q8TAA9 524 aaPredicted RBP13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 COQ8BQ96D53 544 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 ECHDC3Q96DC8 303 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 TRMT2BQ96GJ1 504 aaKnown RBP13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 NEDD4LQ96PU5 975 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 CNPPD1Q9BV87 410 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 EMILIN2Q9BXX0 1053 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 SMG9Q9H0W8 520 aaKnown RBP13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 TPK1Q9H3S4 243 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 EXOSC4Q9NPD3 245 aaKnown RBP13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 STARD7Q9NQZ5 370 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 RNF186Q9NXI6 227 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 H0YIV9 168 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 H3BQ06 376 aaPredicted RBP13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 NRG2O14511 850 aaPredicted RBP13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 SLC16A5O15375 505 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 RGS5O15539 181 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 CA12O43570 354 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 GASTP01350 101 aa13.55□□□□□ -0.24
RAPGEF3-218ENST00000548919 CKMP06732 381 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms