RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 TLL1O43897 1013 aa13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 CEBPBP17676 345 aa13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 TIA1P31483 386 aaKnown RBP eCLIP13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 SERPINB10P48595 397 aa13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 CDK6Q00534 326 aa13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 GBX1Q14549 363 aa13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 MAD2L1BPQ15013 274 aaPredicted RBP13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 ARHGEF6Q15052 776 aa13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 DGUOKQ16854 277 aa13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 RFX4Q33E94 735 aa13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 ZNF805Q5CZA5 627 aa13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 LRIF1Q5T3J3 769 aa13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 GCNT6Q5T4J0 391 aa13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 CEACAM20Q6UY09 585 aa13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 DSG4Q86SJ6 1040 aa13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 CCDC71Q8IV32 467 aaPredicted RBP13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 FAM9CQ8IZT9 166 aa13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 L3MBTL4Q8NA19 623 aa13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 TERB1Q8NA31 727 aa13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 UCN3Q969E3 161 aa13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 TMEM203Q969S6 136 aa13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 SH3YL1Q96HL8 342 aaPredicted RBP13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 PIPSLA2A3N6 862 aa13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 FUOMA2VDF0 154 aa13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 CPNE6O95741 557 aa13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 HPRP00739 348 aa13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 C9P02748 559 aa13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 CTSAP10619 480 aa13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 IDSP22304 550 aa13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 TIGD6Q17RP2 521 aa13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 SLC16A12Q6ZSM3 486 aa13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 EIF3MQ7L2H7 374 aaKnown RBP13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 WDR53Q7Z5U6 358 aaPredicted RBP13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 AQP11Q8NBQ7 271 aa13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 COL26A1Q96A83 441 aa13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 TESCQ96BS2 214 aa13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 PRR14Q9BWN1 585 aa13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 YTHDF1Q9BYJ9 559 aaKnown RBP13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 OR51E2Q9H255 320 aa13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 DCSTAMPQ9H295 470 aa13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 KCNK12Q9HB15 430 aa13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 CUEDC1Q9NWM3 386 aaPredicted RBP13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 DNAJC27Q9NZQ0 273 aa13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 ENPP5Q9UJA9 477 aa13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 ZNF510Q9Y2H8 683 aa13.11□□□□□ -0.31
PRPF40B-209ENST00000548825 TRBC2A0A5B9 178 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 GSTM1P09488 218 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 PTPN2P17706 415 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 GADD45AP24522 165 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 HOXA9P31269 272 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 LIPAP38571 399 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 RFX3P48380 749 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 TRPC1P48995 793 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 GSTM4Q03013 218 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 CSTF3Q12996 717 aaKnown RBP13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 DHCR24Q15392 516 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 LIPJQ5W064 366 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 RBM45Q8IUH3 476 aaKnown RBP13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 ENTHD1Q8IYW4 607 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 POC5Q8NA72 575 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 PLA2G15Q8NCC3 412 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 UBTD2Q8WUN7 234 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 MUL1Q969V5 352 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 ECHDC3Q96DC8 303 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 ARSGQ96EG1 525 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 LRRC3BQ96PB8 259 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 MCCC1Q96RQ3 725 aaPredicted RBP13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 PHOX2BQ99453 314 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 TRMT61BQ9BVS5 477 aaKnown RBP13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 CCDC177Q9NQR7 707 aaPredicted RBP13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 FAM120CQ9NX05 1096 aaKnown RBP13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 TMED5Q9Y3A6 229 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 PCYT1BQ9Y5K3 369 aaPredicted RBP13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 PDZK1P1A8MUH7 402 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 PRRT4C9JH25 899 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 GFRA2O00451 464 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 PPM1AP35813 382 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 ZNF763Q0D2J5 394 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 CTF1Q16619 201 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 LRRC26Q2I0M4 334 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 CALHM3Q86XJ0 350 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 OR5D16Q8NGK9 328 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 MS4A12Q9NXJ0 267 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 RNF6Q9Y252 685 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 KCNK6Q9Y257 313 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 PCM1Q15154 2024 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 PRAMEF33A0A0G2JMD5 474 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 OR1F1O43749 312 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 PRAMEF10O60809 474 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 GADD45GO95257 159 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 C6P13671 934 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 ACP5P13686 325 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 TPP2P29144 1249 aaPredicted RBP13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 GZMMP51124 257 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 MAPK12P53778 367 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 RAE1P78406 368 aaKnown RBP13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 ST3GAL4Q11206 333 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 TOP3AQ13472 1001 aaPredicted RBP13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 DUSP7Q16829 419 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms