RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 QSOX2Q6ZRP7 698 aa11.68□□□□□ -0.54
GCN1-204ENST00000548132 CHERPQ8IWX8 916 aaKnown RBP11.68□□□□□ -0.54
GCN1-204ENST00000548132 SCUBE1Q8IWY4 988 aa11.68□□□□□ -0.54
GCN1-204ENST00000548132 NKAPQ8N5F7 415 aaKnown RBP11.68□□□□□ -0.54
GCN1-204ENST00000548132 NFAM1Q8NET5 270 aaPredicted RBP11.68□□□□□ -0.54
GCN1-204ENST00000548132 SPATA4Q8NEY3 305 aa11.68□□□□□ -0.54
GCN1-204ENST00000548132 ELP5Q8TE02 316 aa11.68□□□□□ -0.54
GCN1-204ENST00000548132 METTL21AQ8WXB1 218 aa11.68□□□□□ -0.54
GCN1-204ENST00000548132 TBC1D20Q96BZ9 403 aa11.68□□□□□ -0.54
GCN1-204ENST00000548132 SCMH1Q96GD3 660 aa11.68□□□□□ -0.54
GCN1-204ENST00000548132 MAGEB10Q96LZ2 347 aaPredicted RBP11.68□□□□□ -0.54
GCN1-204ENST00000548132 QRFPRQ96P65 431 aa11.68□□□□□ -0.54
GCN1-204ENST00000548132 ERP44Q9BS26 406 aa11.68□□□□□ -0.54
GCN1-204ENST00000548132 DERL2Q9GZP9 239 aa11.68□□□□□ -0.54
GCN1-204ENST00000548132 SAYSD1Q9NPB0 183 aa11.68□□□□□ -0.54
GCN1-204ENST00000548132 NECTIN3Q9NQS3 549 aa11.68□□□□□ -0.54
GCN1-204ENST00000548132 WHRNQ9P202 907 aa11.68□□□□□ -0.54
GCN1-204ENST00000548132 C19orf25Q9UFG5 118 aaPredicted RBP11.68□□□□□ -0.54
GCN1-204ENST00000548132 ZNF223Q9UK11 482 aaPredicted RBP11.68□□□□□ -0.54
GCN1-204ENST00000548132 NCKAP5O14513 1909 aa11.68□□□□□ -0.54
GCN1-204ENST00000548132 GTF3C1Q12789 2109 aa11.68□□□□□ -0.54
GCN1-204ENST00000548132 A0A0G2JN53 185 aa11.67□□□□□ -0.54
GCN1-204ENST00000548132 ASPDHA6ND91 283 aa11.67□□□□□ -0.54
GCN1-204ENST00000548132 SAGE2PA6NJ88 616 aa11.67□□□□□ -0.54
GCN1-204ENST00000548132 LRRTM2O43300 516 aa11.67□□□□□ -0.54
GCN1-204ENST00000548132 FAM155BO75949 473 aa11.67□□□□□ -0.54
GCN1-204ENST00000548132 NEURL1O76050 574 aa11.67□□□□□ -0.54
GCN1-204ENST00000548132 WDR47O94967 919 aa11.67□□□□□ -0.54
GCN1-204ENST00000548132 CD1DP15813 335 aa11.67□□□□□ -0.54
GCN1-204ENST00000548132 PPP2R1BP30154 601 aa11.67□□□□□ -0.54
GCN1-204ENST00000548132 RGS1Q08116 209 aa11.67□□□□□ -0.54
GCN1-204ENST00000548132 E2F2Q14209 437 aa11.67□□□□□ -0.54
GCN1-204ENST00000548132 CSHL1Q14406 222 aa11.67□□□□□ -0.54
GCN1-204ENST00000548132 TOR1AIP1Q5JTV8 583 aa11.67□□□□□ -0.54
GCN1-204ENST00000548132 ABHD17BQ5VST6 288 aa11.67□□□□□ -0.54
GCN1-204ENST00000548132 ZNF572Q7Z3I7 529 aaPredicted RBP11.67□□□□□ -0.54
GCN1-204ENST00000548132 CMC1Q7Z7K0 106 aa11.67□□□□□ -0.54
GCN1-204ENST00000548132 SIAH3Q8IW03 269 aa11.67□□□□□ -0.54
GCN1-204ENST00000548132 ARMC10Q8N2F6 343 aa11.67□□□□□ -0.54
GCN1-204ENST00000548132 PDPRQ8NCN5 879 aa11.67□□□□□ -0.54
GCN1-204ENST00000548132 M1APQ8TC57 530 aa11.67□□□□□ -0.54
GCN1-204ENST00000548132 GAL3ST3Q96A11 431 aa11.67□□□□□ -0.54
GCN1-204ENST00000548132 UBXN10Q96LJ8 280 aa11.67□□□□□ -0.54
GCN1-204ENST00000548132 FRMD6Q96NE9 622 aa11.67□□□□□ -0.54
GCN1-204ENST00000548132 CSF3RQ99062 836 aa11.67□□□□□ -0.54
GCN1-204ENST00000548132 PHACTR1Q9C0D0 580 aa11.67□□□□□ -0.54
GCN1-204ENST00000548132 GPAMQ9HCL2 828 aa11.67□□□□□ -0.54
GCN1-204ENST00000548132 ANKRD10Q9NXR5 420 aa11.67□□□□□ -0.54
GCN1-204ENST00000548132 DYRK1BQ9Y463 629 aa11.67□□□□□ -0.54
GCN1-204ENST00000548132 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.67□□□□□ -0.54
GCN1-204ENST00000548132 ZNF407Q9C0G0 2248 aa11.66□□□□□ -0.54
GCN1-204ENST00000548132 FAM187AA6NFU0 413 aa11.66□□□□□ -0.54
GCN1-204ENST00000548132 NCF1BA6NI72 391 aaPredicted RBP11.66□□□□□ -0.54
GCN1-204ENST00000548132 GABRR3A8MPY1 467 aa11.66□□□□□ -0.54
GCN1-204ENST00000548132 NCF1CA8MVU1 366 aaPredicted RBP11.66□□□□□ -0.54
GCN1-204ENST00000548132 FAM227AF5H4B4 570 aa11.66□□□□□ -0.54
GCN1-204ENST00000548132 NDC80O14777 642 aa11.66□□□□□ -0.54
GCN1-204ENST00000548132 EIF3HO15372 352 aaKnown RBP eCLIP11.66□□□□□ -0.542e-7■□□□□ 10.9
GCN1-204ENST00000548132 B4GALT2O60909 372 aa11.66□□□□□ -0.54
GCN1-204ENST00000548132 SERPIND1P05546 499 aa11.66□□□□□ -0.54
GCN1-204ENST00000548132 SERPINA6P08185 405 aa11.66□□□□□ -0.54
GCN1-204ENST00000548132 SLC35E2BP0CK96 405 aa11.66□□□□□ -0.54
GCN1-204ENST00000548132 NCF1P14598 390 aaPredicted RBP11.66□□□□□ -0.54
GCN1-204ENST00000548132 IL10P22301 178 aa11.66□□□□□ -0.54
GCN1-204ENST00000548132 GGT5P36269 586 aa11.66□□□□□ -0.54
GCN1-204ENST00000548132 HNF4AP41235 474 aa11.66□□□□□ -0.54
GCN1-204ENST00000548132 POU4F1Q01851 419 aa11.66□□□□□ -0.54
GCN1-204ENST00000548132 ELOAQ14241 798 aaKnown RBP11.66□□□□□ -0.54
GCN1-204ENST00000548132 ZRSR2Q15696 482 aaKnown RBP11.66□□□□□ -0.54
GCN1-204ENST00000548132 NSDHLQ15738 373 aa11.66□□□□□ -0.54
GCN1-204ENST00000548132 EXT1Q16394 746 aa11.66□□□□□ -0.54
GCN1-204ENST00000548132 ZNF766Q5HY98 468 aa11.66□□□□□ -0.54
GCN1-204ENST00000548132 ABHD13Q7L211 337 aa11.66□□□□□ -0.54
GCN1-204ENST00000548132 APCDD1LQ8NCL9 501 aa11.66□□□□□ -0.54
GCN1-204ENST00000548132 FBXO25Q8TCJ0 367 aa11.66□□□□□ -0.54
GCN1-204ENST00000548132 ESAMQ96AP7 390 aa11.66□□□□□ -0.54
GCN1-204ENST00000548132 MS4A6EQ96DS6 147 aa11.66□□□□□ -0.54
GCN1-204ENST00000548132 WDR34Q96EX3 536 aa11.66□□□□□ -0.54
GCN1-204ENST00000548132 LPAR4Q99677 370 aa11.66□□□□□ -0.54
GCN1-204ENST00000548132 EGFL8Q99944 293 aa11.66□□□□□ -0.54
GCN1-204ENST00000548132 AIF1LQ9BQI0 150 aa11.66□□□□□ -0.54
GCN1-204ENST00000548132 TRIM54Q9BYV2 358 aa11.66□□□□□ -0.54
GCN1-204ENST00000548132 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.66□□□□□ -0.54
GCN1-204ENST00000548132 KCNK13Q9HB14 408 aa11.66□□□□□ -0.54
GCN1-204ENST00000548132 NSMCE4AQ9NXX6 385 aa11.66□□□□□ -0.54
GCN1-204ENST00000548132 CTNNAL1Q9UBT7 734 aa11.66□□□□□ -0.54
GCN1-204ENST00000548132 PCDHGB6Q9Y5F9 930 aa11.66□□□□□ -0.54
GCN1-204ENST00000548132 CELSR1Q9NYQ6 3014 aa11.66□□□□□ -0.54
GCN1-204ENST00000548132 TEP1Q99973 2627 aaKnown RBP11.66□□□□□ -0.54
GCN1-204ENST00000548132 PKDREJQ9NTG1 2253 aa11.66□□□□□ -0.54
GCN1-204ENST00000548132 HMX2A2RU54 273 aa11.65□□□□□ -0.54
GCN1-204ENST00000548132 A8MUI8 341 aa11.65□□□□□ -0.54
GCN1-204ENST00000548132 CCDC166P0CW27 439 aa11.65□□□□□ -0.54
GCN1-204ENST00000548132 RNH1P13489 461 aaKnown RBP11.65□□□□□ -0.54
GCN1-204ENST00000548132 ICAM2P13598 275 aa11.65□□□□□ -0.54
GCN1-204ENST00000548132 JAK1P23458 1154 aa11.65□□□□□ -0.54
GCN1-204ENST00000548132 CERS1P27544 350 aa11.65□□□□□ -0.54
GCN1-204ENST00000548132 TPP2P29144 1249 aaPredicted RBP11.65□□□□□ -0.54
GCN1-204ENST00000548132 CD96P40200 585 aa11.65□□□□□ -0.54
GCN1-204ENST00000548132 KCNC1P48547 511 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms