RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 CSTF3Q12996 717 aaKnown RBP16.58■□□□□ 0.24
HDAC7-227ENST00000548080 SRSF6Q13247 344 aaKnown RBP16.58■□□□□ 0.24
HDAC7-227ENST00000548080 GSTA3Q16772 222 aa16.58■□□□□ 0.24
HDAC7-227ENST00000548080 PPP1R3BQ86XI6 285 aa16.58■□□□□ 0.24
HDAC7-227ENST00000548080 KRT78Q8N1N4 520 aa16.58■□□□□ 0.24
HDAC7-227ENST00000548080 SNIP1Q8TAD8 396 aaKnown RBP16.58■□□□□ 0.24
HDAC7-227ENST00000548080 DPH7Q9BTV6 452 aa16.58■□□□□ 0.24
HDAC7-227ENST00000548080 ASPSCR1Q9BZE9 553 aa16.58■□□□□ 0.24
HDAC7-227ENST00000548080 ULBP3Q9BZM4 244 aa16.58■□□□□ 0.24
HDAC7-227ENST00000548080 MRPS30Q9NP92 439 aaKnown RBP16.58■□□□□ 0.24
HDAC7-227ENST00000548080 PCDHGA3Q9Y5H0 932 aa16.58■□□□□ 0.24
HDAC7-227ENST00000548080 EPG5Q9HCE0 2579 aa16.57■□□□□ 0.24
HDAC7-227ENST00000548080 LAMA5O15230 3695 aa16.57■□□□□ 0.24
HDAC7-227ENST00000548080 IGKV1-8A0A0C4DH67 115 aa16.57■□□□□ 0.24
HDAC7-227ENST00000548080 ZZEF1O43149 2961 aa16.57■□□□□ 0.24
HDAC7-227ENST00000548080 RSL1D1O76021 490 aaKnown RBP16.57■□□□□ 0.24
HDAC7-227ENST00000548080 STK17BO94768 372 aa16.57■□□□□ 0.24
HDAC7-227ENST00000548080 NTRK1P04629 796 aa16.57■□□□□ 0.24
HDAC7-227ENST00000548080 PCNAP12004 261 aa16.57■□□□□ 0.24
HDAC7-227ENST00000548080 FGF5P12034 268 aa16.57■□□□□ 0.24
HDAC7-227ENST00000548080 HSD3B1P14060 373 aa16.57■□□□□ 0.24
HDAC7-227ENST00000548080 IDO1P14902 403 aa16.57■□□□□ 0.24
HDAC7-227ENST00000548080 CALB2P22676 271 aa16.57■□□□□ 0.24
HDAC7-227ENST00000548080 HSD3B2P26439 372 aa16.57■□□□□ 0.24
HDAC7-227ENST00000548080 SCTRP47872 440 aa16.57■□□□□ 0.24
HDAC7-227ENST00000548080 GABRA4P48169 554 aa16.57■□□□□ 0.24
HDAC7-227ENST00000548080 HMGCS1Q01581 520 aa16.57■□□□□ 0.24
HDAC7-227ENST00000548080 TIPARPQ7Z3E1 657 aaKnown RBP16.57■□□□□ 0.24
HDAC7-227ENST00000548080 PLD3Q8IV08 490 aa16.57■□□□□ 0.24
HDAC7-227ENST00000548080 FNDC5Q8NAU1 212 aa16.57■□□□□ 0.24
HDAC7-227ENST00000548080 OR4K1Q8NGD4 311 aa16.57■□□□□ 0.24
HDAC7-227ENST00000548080 KCNE4Q8WWG9 221 aa16.57■□□□□ 0.24
HDAC7-227ENST00000548080 N4BP2L2Q92802 583 aaPredicted RBP16.57■□□□□ 0.24
HDAC7-227ENST00000548080 CMTM5Q96DZ9 223 aa16.57■□□□□ 0.24
HDAC7-227ENST00000548080 TCTN2Q96GX1 697 aa16.57■□□□□ 0.24
HDAC7-227ENST00000548080 AIF1LQ9BQI0 150 aa16.57■□□□□ 0.24
HDAC7-227ENST00000548080 PITHD1Q9GZP4 211 aaPredicted RBP16.57■□□□□ 0.24
HDAC7-227ENST00000548080 SPRTNQ9H040 489 aaPredicted RBP16.57■□□□□ 0.24
HDAC7-227ENST00000548080 ACTR5Q9H9F9 607 aaPredicted RBP16.57■□□□□ 0.24
HDAC7-227ENST00000548080 LRTM1Q9HBL6 345 aa16.57■□□□□ 0.24
HDAC7-227ENST00000548080 AIG1Q9NVV5 245 aa16.57■□□□□ 0.24
HDAC7-227ENST00000548080 C1orf109Q9NX04 203 aa16.57■□□□□ 0.24
HDAC7-227ENST00000548080 TSC22D4Q9Y3Q8 395 aa16.57■□□□□ 0.24
HDAC7-227ENST00000548080 NPIPB8E9PQR5 432 aa16.56■□□□□ 0.24
HDAC7-227ENST00000548080 H7BY64 318 aa16.56■□□□□ 0.24
HDAC7-227ENST00000548080 PSMD12O00232 456 aaPredicted RBP16.56■□□□□ 0.24
HDAC7-227ENST00000548080 MAP3K7O43318 606 aa16.56■□□□□ 0.24
HDAC7-227ENST00000548080 CTSVO60911 334 aa16.56■□□□□ 0.24
HDAC7-227ENST00000548080 SEC22BO75396 215 aa16.56■□□□□ 0.24
HDAC7-227ENST00000548080 PRPH2P23942 346 aa16.56■□□□□ 0.24
HDAC7-227ENST00000548080 MRPL19P49406 292 aaKnown RBP16.56■□□□□ 0.24
HDAC7-227ENST00000548080 NCALDP61601 193 aa16.56■□□□□ 0.24
HDAC7-227ENST00000548080 REEP5Q00765 189 aa16.56■□□□□ 0.24
HDAC7-227ENST00000548080 MEF2AQ02078 507 aaPredicted RBP16.56■□□□□ 0.24
HDAC7-227ENST00000548080 MAD2L1Q13257 205 aaPredicted RBP16.56■□□□□ 0.24
HDAC7-227ENST00000548080 CLN3Q13286 438 aa16.56■□□□□ 0.24
HDAC7-227ENST00000548080 DDX39BQ13838 428 aaKnown RBP16.56■□□□□ 0.24
HDAC7-227ENST00000548080 IL11RAQ14626 422 aa16.56■□□□□ 0.24
HDAC7-227ENST00000548080 HERC3Q15034 1050 aa16.56■□□□□ 0.24
HDAC7-227ENST00000548080 RPS6KA2Q15349 733 aa16.56■□□□□ 0.24
HDAC7-227ENST00000548080 ADCK2Q7Z695 626 aa16.56■□□□□ 0.24
HDAC7-227ENST00000548080 VASH2Q86V25 355 aa16.56■□□□□ 0.24
HDAC7-227ENST00000548080 DNAJC22Q8N4W6 341 aa16.56■□□□□ 0.24
HDAC7-227ENST00000548080 GALNT6Q8NCL4 622 aa16.56■□□□□ 0.24
HDAC7-227ENST00000548080 ZNF248Q8NDW4 579 aa16.56■□□□□ 0.24
HDAC7-227ENST00000548080 HUS1BQ8NHY5 278 aa16.56■□□□□ 0.24
HDAC7-227ENST00000548080 PRAP1Q96NZ9 151 aa16.56■□□□□ 0.24
HDAC7-227ENST00000548080 MTERF1Q99551 399 aaKnown RBP16.56■□□□□ 0.24
HDAC7-227ENST00000548080 SPNS1Q9H2V7 528 aa16.56■□□□□ 0.24
HDAC7-227ENST00000548080 NT5DC2Q9H857 520 aa16.56■□□□□ 0.24
HDAC7-227ENST00000548080 BRF2Q9HAW0 419 aa16.56■□□□□ 0.24
HDAC7-227ENST00000548080 STARD5Q9NSY2 213 aa16.56■□□□□ 0.24
HDAC7-227ENST00000548080 TMEM184CQ9NVA4 438 aa16.56■□□□□ 0.24
HDAC7-227ENST00000548080 GPR45Q9Y5Y3 372 aa16.56■□□□□ 0.24
HDAC7-227ENST00000548080 A0A0J9YVX5 310 aa16.55■□□□□ 0.24
HDAC7-227ENST00000548080 FOXE1O00358 373 aaPredicted RBP16.55■□□□□ 0.24
HDAC7-227ENST00000548080 KLK10O43240 276 aa16.55■□□□□ 0.24
HDAC7-227ENST00000548080 STATHP02808 62 aa16.55■□□□□ 0.24
HDAC7-227ENST00000548080 COX4I1P13073 169 aa16.55■□□□□ 0.24
HDAC7-227ENST00000548080 GPX3P22352 226 aa16.55■□□□□ 0.24
HDAC7-227ENST00000548080 HRH2P25021 359 aa16.55■□□□□ 0.24
HDAC7-227ENST00000548080 RASSF2P50749 326 aa16.55■□□□□ 0.24
HDAC7-227ENST00000548080 DIO3P55073 304 aa16.55■□□□□ 0.24
HDAC7-227ENST00000548080 CSNK1G2P78368 415 aa16.55■□□□□ 0.24
HDAC7-227ENST00000548080 RFTN2Q52LD8 501 aaPredicted RBP16.55■□□□□ 0.24
HDAC7-227ENST00000548080 FRMPD2BQ6IN97 320 aa16.55■□□□□ 0.24
HDAC7-227ENST00000548080 TMIGD1Q6UXZ0 262 aa16.55■□□□□ 0.24
HDAC7-227ENST00000548080 TMEM126BQ8IUX1 230 aa16.55■□□□□ 0.24
HDAC7-227ENST00000548080 MIER2Q8N344 545 aa16.55■□□□□ 0.24
HDAC7-227ENST00000548080 RNF175Q8N4F7 328 aa16.55■□□□□ 0.24
HDAC7-227ENST00000548080 ZNF740Q8NDX6 193 aa16.55■□□□□ 0.24
HDAC7-227ENST00000548080 CMTM7Q96FZ5 175 aa16.55■□□□□ 0.24
HDAC7-227ENST00000548080 TEFMQ96QE5 360 aaKnown RBP16.55■□□□□ 0.24
HDAC7-227ENST00000548080 C1orf50Q9BV19 199 aa16.55■□□□□ 0.24
HDAC7-227ENST00000548080 SYNPO2LQ9H987 977 aa16.55■□□□□ 0.24
HDAC7-227ENST00000548080 FANCEQ9HB96 536 aa16.55■□□□□ 0.24
HDAC7-227ENST00000548080 PRM3Q9NNZ6 103 aa16.55■□□□□ 0.24
HDAC7-227ENST00000548080 IRAK4Q9NWZ3 460 aa16.55■□□□□ 0.24
HDAC7-227ENST00000548080 NOP53Q9NZM5 478 aaKnown RBP16.55■□□□□ 0.24
HDAC7-227ENST00000548080 MDC1Q14676 2089 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms