RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 NEO1Q92859 1461 aa3.93□□□□□ -1.78
SCAF11-210ENST00000547654 HEG1Q9ULI3 1381 aa3.93□□□□□ -1.78
SCAF11-210ENST00000547654 TRIM49BA6NDI0 452 aa3.93□□□□□ -1.78
SCAF11-210ENST00000547654 CASTOR2A6NHX0 329 aa3.93□□□□□ -1.78
SCAF11-210ENST00000547654 EEF2KO00418 725 aaKnown RBP3.93□□□□□ -1.78
SCAF11-210ENST00000547654 GAPDHSO14556 408 aaPredicted RBP3.93□□□□□ -1.78
SCAF11-210ENST00000547654 ARPC2O15144 300 aa3.93□□□□□ -1.78
SCAF11-210ENST00000547654 RNASEH1O60930 286 aaKnown RBP3.93□□□□□ -1.78
SCAF11-210ENST00000547654 SPAG6O75602 509 aa3.93□□□□□ -1.78
SCAF11-210ENST00000547654 GRAP2O75791 330 aa3.93□□□□□ -1.78
SCAF11-210ENST00000547654 CHRNGP07510 517 aa3.93□□□□□ -1.78
SCAF11-210ENST00000547654 HSPA8P11142 646 aaKnown RBP3.93□□□□□ -1.78
SCAF11-210ENST00000547654 TOP1P11387 765 aaKnown RBP3.93□□□□□ -1.78
SCAF11-210ENST00000547654 ARSBP15848 533 aa3.93□□□□□ -1.78
SCAF11-210ENST00000547654 CBLP22681 906 aa3.93□□□□□ -1.78
SCAF11-210ENST00000547654 C21orf33P30042 268 aaPredicted RBP3.93□□□□□ -1.78
SCAF11-210ENST00000547654 CORO1AP31146 461 aaKnown RBP3.93□□□□□ -1.78
SCAF11-210ENST00000547654 GDI1P31150 447 aa3.93□□□□□ -1.78
SCAF11-210ENST00000547654 GABPB1Q06547 395 aaPredicted RBP3.93□□□□□ -1.78
SCAF11-210ENST00000547654 DMP1Q13316 513 aaPredicted RBP3.93□□□□□ -1.78
SCAF11-210ENST00000547654 GK2Q14410 553 aaPredicted RBP3.93□□□□□ -1.78
SCAF11-210ENST00000547654 ODF4Q2M2E3 257 aa3.93□□□□□ -1.78
SCAF11-210ENST00000547654 SLC36A3Q495N2 470 aa3.93□□□□□ -1.78
SCAF11-210ENST00000547654 NADK2Q4G0N4 442 aa3.93□□□□□ -1.78
SCAF11-210ENST00000547654 FSCBQ5H9T9 825 aa3.93□□□□□ -1.78
SCAF11-210ENST00000547654 NDUFAF5Q5TEU4 345 aa3.93□□□□□ -1.78
SCAF11-210ENST00000547654 WBP2NLQ6ICG8 309 aa3.93□□□□□ -1.78
SCAF11-210ENST00000547654 RTN4RL2Q86UN3 420 aa3.93□□□□□ -1.78
SCAF11-210ENST00000547654 CHERPQ8IWX8 916 aaKnown RBP3.93□□□□□ -1.78
SCAF11-210ENST00000547654 CDK20Q8IZL9 346 aa3.93□□□□□ -1.78
SCAF11-210ENST00000547654 LGI2Q8N0V4 545 aa3.93□□□□□ -1.78
SCAF11-210ENST00000547654 ZNF444Q8N0Y2 327 aaPredicted RBP3.93□□□□□ -1.78
SCAF11-210ENST00000547654 CPSF7Q8N684 471 aaKnown RBP3.93□□□□□ -1.78
SCAF11-210ENST00000547654 SIDT2Q8NBJ9 832 aaKnown RBP3.93□□□□□ -1.78
SCAF11-210ENST00000547654 NPEPL1Q8NDH3 523 aa3.93□□□□□ -1.78
SCAF11-210ENST00000547654 OR52B4Q8NGK2 314 aa3.93□□□□□ -1.78
SCAF11-210ENST00000547654 PIGTQ969N2 578 aa3.93□□□□□ -1.78
SCAF11-210ENST00000547654 PHF21BQ96EK2 531 aa3.93□□□□□ -1.78
SCAF11-210ENST00000547654 OXNAD1Q96HP4 312 aaPredicted RBP3.93□□□□□ -1.78
SCAF11-210ENST00000547654 RPGRIP1Q96KN7 1286 aa3.93□□□□□ -1.78
SCAF11-210ENST00000547654 CFAP53Q96M91 514 aa3.93□□□□□ -1.78
SCAF11-210ENST00000547654 TAAR6Q96RI8 345 aa3.93□□□□□ -1.78
SCAF11-210ENST00000547654 GPA33Q99795 319 aa3.93□□□□□ -1.78
SCAF11-210ENST00000547654 COQ7Q99807 217 aa3.93□□□□□ -1.78
SCAF11-210ENST00000547654 PIGQQ9BRB3 760 aa3.93□□□□□ -1.78
SCAF11-210ENST00000547654 FICDQ9BVA6 458 aa3.93□□□□□ -1.78
SCAF11-210ENST00000547654 LRRC2Q9BYS8 371 aa3.93□□□□□ -1.78
SCAF11-210ENST00000547654 NMNAT2Q9BZQ4 307 aa3.93□□□□□ -1.78
SCAF11-210ENST00000547654 NACA2Q9H009 215 aa3.93□□□□□ -1.78
SCAF11-210ENST00000547654 ACTL8Q9H568 366 aa3.93□□□□□ -1.78
SCAF11-210ENST00000547654 LRRC40Q9H9A6 602 aa3.93□□□□□ -1.78
SCAF11-210ENST00000547654 PCDH9Q9HC56 1237 aa3.93□□□□□ -1.78
SCAF11-210ENST00000547654 MRPL17Q9NRX2 175 aaKnown RBP3.93□□□□□ -1.78
SCAF11-210ENST00000547654 FAM207AQ9NSI2 230 aaPredicted RBP3.93□□□□□ -1.78
SCAF11-210ENST00000547654 CNOT2Q9NZN8 540 aaKnown RBP3.93□□□□□ -1.78
SCAF11-210ENST00000547654 LRWD1Q9UFC0 647 aa3.93□□□□□ -1.78
SCAF11-210ENST00000547654 NARFQ9UHQ1 456 aa3.93□□□□□ -1.78
SCAF11-210ENST00000547654 CHMP2BQ9UQN3 213 aa3.93□□□□□ -1.78
SCAF11-210ENST00000547654 MFHAS1Q9Y4C4 1052 aa3.93□□□□□ -1.78
SCAF11-210ENST00000547654 KDRP35968 1356 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 TNIKQ9UKE5 1360 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 MROH2AA6NES4 1674 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 TRAV18A0A075B6X5 111 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 C15orf38-AP3S2A0A0A6YYH1 394 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 IGHV4-28A0A0C4DH34 117 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 A0A1W2PRB8 838 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 CTAGE15A4D2H0 777 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 PRR32B1ATL7 298 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 C17orf105B2RV13 164 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 H3BMM5 538 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 M0R296 226 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 CXCL11O14625 94 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 ZNF197O14709 1029 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 CHUKO15111 745 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 CHADO15335 359 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 SPRY3O43610 288 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 LDB3O75112 727 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 VPS26AO75436 327 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 MFN2O95140 757 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 ADCY5O95622 1261 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 PROS1P07225 676 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 NUDT17P0C025 328 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 CTAGE8P0CG41 777 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 DLATP10515 647 aaKnown RBP3.92□□□□□ -1.78
SCAF11-210ENST00000547654 CSF2RAP15509 400 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 CKMT2P17540 419 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 CCNCP24863 283 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 STIP1P31948 543 aaKnown RBP3.92□□□□□ -1.78
SCAF11-210ENST00000547654 GNL1P36915 607 aaPredicted RBP3.92□□□□□ -1.78
SCAF11-210ENST00000547654 MXI1P50539 228 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 SEC61A1P61619 476 aaKnown RBP3.92□□□□□ -1.78
SCAF11-210ENST00000547654 FKBP1BP68106 108 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 RPP38P78345 283 aaKnown RBP3.92□□□□□ -1.78
SCAF11-210ENST00000547654 SPIBQ01892 262 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 ZNF415Q09FC8 603 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 RASGEF1BQ0VAM2 473 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 MYBPHQ13203 477 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 SNTB2Q13425 540 aaKnown RBP3.92□□□□□ -1.78
SCAF11-210ENST00000547654 CUL2Q13617 745 aa3.92□□□□□ -1.78
SCAF11-210ENST00000547654 UGT3A2Q3SY77 523 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms