RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 SYT14Q8NB59 555 aa11.51□□□□□ -0.57
RBFOX1-208ENST00000547372 OR13C4Q8NGS5 318 aa11.51□□□□□ -0.57
RBFOX1-208ENST00000547372 FCRL2Q96LA5 508 aaPredicted RBP11.51□□□□□ -0.57
RBFOX1-208ENST00000547372 SEMA3CQ99985 751 aa11.51□□□□□ -0.57
RBFOX1-208ENST00000547372 ANKRA2Q9H9E1 313 aa11.51□□□□□ -0.57
RBFOX1-208ENST00000547372 TREX1Q9NSU2 369 aa11.51□□□□□ -0.57
RBFOX1-208ENST00000547372 CLEC4AQ9UMR7 237 aa11.51□□□□□ -0.57
RBFOX1-208ENST00000547372 BEST1O76090 585 aa11.51□□□□□ -0.57
RBFOX1-208ENST00000547372 UROSP10746 265 aa11.51□□□□□ -0.57
RBFOX1-208ENST00000547372 MTHFD2P13995 350 aa11.51□□□□□ -0.57
RBFOX1-208ENST00000547372 STOMP27105 288 aa11.51□□□□□ -0.57
RBFOX1-208ENST00000547372 MAOBP27338 520 aa11.51□□□□□ -0.57
RBFOX1-208ENST00000547372 ATP6V1E1P36543 226 aa11.51□□□□□ -0.57
RBFOX1-208ENST00000547372 TARBP2Q15633 366 aaKnown RBP11.51□□□□□ -0.57
RBFOX1-208ENST00000547372 KYAT1Q16773 422 aa11.51□□□□□ -0.57
RBFOX1-208ENST00000547372 C18orf21Q32NC0 220 aaPredicted RBP11.51□□□□□ -0.57
RBFOX1-208ENST00000547372 LGALSLQ3ZCW2 172 aaPredicted RBP11.51□□□□□ -0.57
RBFOX1-208ENST00000547372 CLLU1Q5K131 121 aa11.51□□□□□ -0.57
RBFOX1-208ENST00000547372 TMEM88Q6PEY1 159 aa11.51□□□□□ -0.57
RBFOX1-208ENST00000547372 STK40Q8N2I9 435 aa11.51□□□□□ -0.57
RBFOX1-208ENST00000547372 TMEM145Q8NBT3 493 aa11.51□□□□□ -0.57
RBFOX1-208ENST00000547372 OR7G3Q8NG95 312 aa11.51□□□□□ -0.57
RBFOX1-208ENST00000547372 OR8J3Q8NGG0 315 aa11.51□□□□□ -0.57
RBFOX1-208ENST00000547372 OR8D4Q8NGM9 314 aa11.51□□□□□ -0.57
RBFOX1-208ENST00000547372 OR2T35Q8NGX2 323 aa11.51□□□□□ -0.57
RBFOX1-208ENST00000547372 PTP4A1Q93096 173 aa11.51□□□□□ -0.57
RBFOX1-208ENST00000547372 TEPSINQ96N21 525 aa11.51□□□□□ -0.57
RBFOX1-208ENST00000547372 ZNF599Q96NL3 588 aa11.51□□□□□ -0.57
RBFOX1-208ENST00000547372 ZIC5Q96T25 663 aa11.51□□□□□ -0.57
RBFOX1-208ENST00000547372 DUSP16Q9BY84 665 aa11.51□□□□□ -0.57
RBFOX1-208ENST00000547372 SLC29A3Q9BZD2 475 aa11.51□□□□□ -0.57
RBFOX1-208ENST00000547372 CD244Q9BZW8 370 aa11.51□□□□□ -0.57
RBFOX1-208ENST00000547372 ERVW-1Q9UQF0 538 aa11.51□□□□□ -0.57
RBFOX1-208ENST00000547372 ERVK-19Q9WJR5 959 aa11.51□□□□□ -0.57
RBFOX1-208ENST00000547372 SHROOM3Q8TF72 1996 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 WDR81Q562E7 1941 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 QSER1Q2KHR3 1735 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 A0A0G2JPF8 293 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 RPS10-NUDT3A0A1W2PQS6 291 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 SLC22A23A1A5C7 686 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 GSAPA4D1B5 854 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 HNRNPCL3B7ZW38 293 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 CASKO14936 926 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 MMP20O60882 483 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 HLA-DQB2P05538 268 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 HNRNPCL4P0DMR1 293 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 ANXA3P12429 323 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 FEN1P39748 380 aaKnown RBP11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 IL2P60568 153 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 MPP7Q5T2T1 576 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 FAM83AQ86UY5 434 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 ZFP82Q8N141 532 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 ATOH1Q92858 354 aaPredicted RBP11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 GPR137Q96N19 417 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 MIXL1Q9H2W2 232 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 RLIMQ9NVW2 624 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 ACTR10Q9NZ32 417 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 ASB1Q9Y576 335 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 KLRG2A4D1S0 409 aaPredicted RBP11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 SYNDIG1LA6NDD5 238 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 TTLL8A6PVC2 850 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 UPK3BL1B0FP48 263 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 UPK3BL2E5RIL1 263 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 HAS3O00219 553 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 PDCD5O14737 125 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 CHP2O43745 196 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 ULK1O75385 1050 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 ECI2O75521 394 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 NCR1O76036 304 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 DHFRP00374 187 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 IQCF3P0C7M6 154 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 PRR35P0CG20 571 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 OR1E2P47887 323 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 COL28A1Q2UY09 1125 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 OTUD1Q5VV17 481 aaPredicted RBP11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 NOTUMQ6P988 496 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 CIDECQ96AQ7 238 aaPredicted RBP11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 LINGO1Q96FE5 620 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 OPALINQ96PE5 141 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 PCYT2Q99447 389 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 INPP5KQ9BT40 448 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 SLC39A8Q9C0K1 460 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 PDGFCQ9NRA1 345 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 PFDN2Q9UHV9 154 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 TLR6Q9Y2C9 796 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 NME7Q9Y5B8 376 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 ARL5AQ9Y689 179 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 CENPFP49454 3210 aa11.5□□□□□ -0.57
RBFOX1-208ENST00000547372 MUSKO15146 869 aa11.49□□□□□ -0.57
RBFOX1-208ENST00000547372 PEX14O75381 377 aa11.49□□□□□ -0.57
RBFOX1-208ENST00000547372 GATBO75879 557 aaKnown RBP11.49□□□□□ -0.57
RBFOX1-208ENST00000547372 SIX6O95475 246 aa11.49□□□□□ -0.57
RBFOX1-208ENST00000547372 APOC1P02654 83 aa11.49□□□□□ -0.57
RBFOX1-208ENST00000547372 RAB3BP20337 219 aa11.49□□□□□ -0.57
RBFOX1-208ENST00000547372 VIPR1P32241 457 aa11.49□□□□□ -0.57
RBFOX1-208ENST00000547372 CSNK2BP67870 215 aa11.49□□□□□ -0.57
RBFOX1-208ENST00000547372 PAQR6Q6TCH4 344 aa11.49□□□□□ -0.57
RBFOX1-208ENST00000547372 ZNF704Q6ZNC4 412 aaPredicted RBP11.49□□□□□ -0.57
RBFOX1-208ENST00000547372 GPR149Q86SP6 731 aa11.49□□□□□ -0.57
RBFOX1-208ENST00000547372 TMEM132CQ8N3T6 1108 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms