RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 ZC3H12BQ5HYM0 836 aaKnown RBP11.5□□□□□ -0.57
HDAC7-226ENST00000547259 FHL5Q5TD97 284 aa11.5□□□□□ -0.57
HDAC7-226ENST00000547259 MED27Q6P2C8 311 aa11.5□□□□□ -0.57
HDAC7-226ENST00000547259 TMIGD1Q6UXZ0 262 aa11.5□□□□□ -0.57
HDAC7-226ENST00000547259 FAM47EQ6ZV65 393 aa11.5□□□□□ -0.57
HDAC7-226ENST00000547259 RNF44Q7L0R7 432 aa11.5□□□□□ -0.57
HDAC7-226ENST00000547259 AFAP1L2Q8N4X5 818 aa11.5□□□□□ -0.57
HDAC7-226ENST00000547259 ZNF781Q8N8C0 355 aa11.5□□□□□ -0.57
HDAC7-226ENST00000547259 L3MBTL4Q8NA19 623 aa11.5□□□□□ -0.57
HDAC7-226ENST00000547259 ZNF740Q8NDX6 193 aa11.5□□□□□ -0.57
HDAC7-226ENST00000547259 METTL6Q8TCB7 284 aa11.5□□□□□ -0.57
HDAC7-226ENST00000547259 N4BP2L2Q92802 583 aaPredicted RBP11.5□□□□□ -0.57
HDAC7-226ENST00000547259 UBE2E3Q969T4 207 aa11.5□□□□□ -0.57
HDAC7-226ENST00000547259 REPS1Q96D71 796 aa11.5□□□□□ -0.57
HDAC7-226ENST00000547259 SLC41A2Q96JW4 573 aa11.5□□□□□ -0.57
HDAC7-226ENST00000547259 KCNA7Q96RP8 456 aa11.5□□□□□ -0.57
HDAC7-226ENST00000547259 SORT1Q99523 831 aa11.5□□□□□ -0.57
HDAC7-226ENST00000547259 ZFYVE21Q9BQ24 234 aa11.5□□□□□ -0.57
HDAC7-226ENST00000547259 SLC29A3Q9BZD2 475 aa11.5□□□□□ -0.57
HDAC7-226ENST00000547259 C20orf27Q9GZN8 174 aa11.5□□□□□ -0.57
HDAC7-226ENST00000547259 PITHD1Q9GZP4 211 aaPredicted RBP11.5□□□□□ -0.57
HDAC7-226ENST00000547259 ELOVL6Q9H5J4 265 aa11.5□□□□□ -0.57
HDAC7-226ENST00000547259 THAP1Q9NVV9 213 aa11.5□□□□□ -0.57
HDAC7-226ENST00000547259 ZNF225Q9UK10 706 aa11.5□□□□□ -0.57
HDAC7-226ENST00000547259 BTRCQ9Y297 605 aa11.5□□□□□ -0.57
HDAC7-226ENST00000547259 RAP2CQ9Y3L5 183 aa11.5□□□□□ -0.57
HDAC7-226ENST00000547259 HIVEP3Q5T1R4 2406 aa11.5□□□□□ -0.57
HDAC7-226ENST00000547259 BLACEA4D250 179 aa11.49□□□□□ -0.57
HDAC7-226ENST00000547259 TCP11X1B4DZS4 312 aa11.49□□□□□ -0.57
HDAC7-226ENST00000547259 H0YIV9 168 aa11.49□□□□□ -0.57
HDAC7-226ENST00000547259 AZIN1O14977 448 aa11.49□□□□□ -0.57
HDAC7-226ENST00000547259 AGFG2O95081 481 aa11.49□□□□□ -0.57
HDAC7-226ENST00000547259 CHEK2O96017 543 aa11.49□□□□□ -0.57
HDAC7-226ENST00000547259 SERPIND1P05546 499 aa11.49□□□□□ -0.57
HDAC7-226ENST00000547259 KLK3P07288 261 aaPredicted RBP11.49□□□□□ -0.57
HDAC7-226ENST00000547259 UROSP10746 265 aa11.49□□□□□ -0.57
HDAC7-226ENST00000547259 PTPN4P29074 926 aa11.49□□□□□ -0.57
HDAC7-226ENST00000547259 BCL6P41182 706 aa11.49□□□□□ -0.57
HDAC7-226ENST00000547259 PGDP52209 483 aa11.49□□□□□ -0.57
HDAC7-226ENST00000547259 MLLT10P55197 1068 aa11.49□□□□□ -0.57
HDAC7-226ENST00000547259 FOXA1P55317 472 aa11.49□□□□□ -0.57
HDAC7-226ENST00000547259 OCRLQ01968 901 aa11.49□□□□□ -0.57
HDAC7-226ENST00000547259 TUBB3Q13509 450 aa11.49□□□□□ -0.57
HDAC7-226ENST00000547259 DDX39BQ13838 428 aaKnown RBP11.49□□□□□ -0.57
HDAC7-226ENST00000547259 KCNAB1Q14722 419 aa11.49□□□□□ -0.57
HDAC7-226ENST00000547259 UGT8Q16880 541 aa11.49□□□□□ -0.57
HDAC7-226ENST00000547259 ATP1A1-AS1Q5TC04 95 aa11.49□□□□□ -0.57
HDAC7-226ENST00000547259 FAM219BQ5XKK7 198 aa11.49□□□□□ -0.57
HDAC7-226ENST00000547259 CLEC6AQ6EIG7 209 aa11.49□□□□□ -0.57
HDAC7-226ENST00000547259 RGS9BPQ6ZS82 235 aa11.49□□□□□ -0.57
HDAC7-226ENST00000547259 CRLF3Q8IUI8 442 aa11.49□□□□□ -0.57
HDAC7-226ENST00000547259 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.49□□□□□ -0.57
HDAC7-226ENST00000547259 KIRREL3Q8IZU9 778 aa11.49□□□□□ -0.57
HDAC7-226ENST00000547259 D2HGDHQ8N465 521 aa11.49□□□□□ -0.57
HDAC7-226ENST00000547259 MFSD9Q8NBP5 474 aa11.49□□□□□ -0.57
HDAC7-226ENST00000547259 CCT6BQ92526 530 aa11.49□□□□□ -0.57
HDAC7-226ENST00000547259 RERGQ96A58 199 aaPredicted RBP11.49□□□□□ -0.57
HDAC7-226ENST00000547259 SLC25A23Q9BV35 468 aa11.49□□□□□ -0.57
HDAC7-226ENST00000547259 CHRNA10Q9GZZ6 450 aa11.49□□□□□ -0.57
HDAC7-226ENST00000547259 ILKAPQ9H0C8 392 aaPredicted RBP11.49□□□□□ -0.57
HDAC7-226ENST00000547259 ACTL8Q9H568 366 aa11.49□□□□□ -0.57
HDAC7-226ENST00000547259 NT5DC2Q9H857 520 aa11.49□□□□□ -0.57
HDAC7-226ENST00000547259 FANCEQ9HB96 536 aa11.49□□□□□ -0.57
HDAC7-226ENST00000547259 FAM60AQ9NP50 221 aa11.49□□□□□ -0.57
HDAC7-226ENST00000547259 TNFRSF12AQ9NP84 129 aa11.49□□□□□ -0.57
HDAC7-226ENST00000547259 IRAK4Q9NWZ3 460 aa11.49□□□□□ -0.57
HDAC7-226ENST00000547259 SNX6Q9UNH7 406 aa11.49□□□□□ -0.57
HDAC7-226ENST00000547259 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.49□□□□□ -0.57
HDAC7-226ENST00000547259 TIMM22Q9Y584 194 aa11.49□□□□□ -0.57
HDAC7-226ENST00000547259 PCDHGA11Q9Y5H2 935 aa11.49□□□□□ -0.57
HDAC7-226ENST00000547259 ITPR2Q14571 2701 aa11.49□□□□□ -0.57
HDAC7-226ENST00000547259 SPTBP11277 2137 aa11.48□□□□□ -0.57
HDAC7-226ENST00000547259 CACNA1DQ01668 2161 aa11.48□□□□□ -0.57
HDAC7-226ENST00000547259 NBPF19A0A087WUL8 3843 aa11.48□□□□□ -0.57
HDAC7-226ENST00000547259 ANKDD1BA6NHY2 528 aa11.48□□□□□ -0.57
HDAC7-226ENST00000547259 TMEM233B4DJY2 109 aa11.48□□□□□ -0.57
HDAC7-226ENST00000547259 MANBAO00462 879 aa11.48□□□□□ -0.57
HDAC7-226ENST00000547259 KLHL41O60662 606 aa11.48□□□□□ -0.57
HDAC7-226ENST00000547259 KRT6AP02538 564 aa11.48□□□□□ -0.57
HDAC7-226ENST00000547259 KRT6BP04259 564 aa11.48□□□□□ -0.57
HDAC7-226ENST00000547259 SCTRP47872 440 aa11.48□□□□□ -0.57
HDAC7-226ENST00000547259 KRT6CP48668 564 aa11.48□□□□□ -0.57
HDAC7-226ENST00000547259 RPL14P50914 215 aaKnown RBP11.48□□□□□ -0.57
HDAC7-226ENST00000547259 VSX2P58304 361 aaPredicted RBP11.48□□□□□ -0.57
HDAC7-226ENST00000547259 RELAQ04206 551 aa11.48□□□□□ -0.57
HDAC7-226ENST00000547259 GPR19Q15760 415 aa11.48□□□□□ -0.57
HDAC7-226ENST00000547259 SGO1Q5FBB7 561 aa11.48□□□□□ -0.57
HDAC7-226ENST00000547259 TCHHL1Q5QJ38 904 aaPredicted RBP11.48□□□□□ -0.57
HDAC7-226ENST00000547259 KANK2Q63ZY3 851 aa11.48□□□□□ -0.57
HDAC7-226ENST00000547259 FRG2Q64ET8 278 aa11.48□□□□□ -0.57
HDAC7-226ENST00000547259 FRMPD2BQ6IN97 320 aa11.48□□□□□ -0.57
HDAC7-226ENST00000547259 LURAP1LQ8IV03 231 aa11.48□□□□□ -0.57
HDAC7-226ENST00000547259 MCATQ8IVS2 390 aaKnown RBP11.48□□□□□ -0.57
HDAC7-226ENST00000547259 LAS2Q8IYD9 372 aa11.48□□□□□ -0.57
HDAC7-226ENST00000547259 CLYBLQ8N0X4 340 aa11.48□□□□□ -0.57
HDAC7-226ENST00000547259 DNAJC22Q8N4W6 341 aa11.48□□□□□ -0.57
HDAC7-226ENST00000547259 ANKRD53Q8N9V6 530 aa11.48□□□□□ -0.57
HDAC7-226ENST00000547259 TTLQ8NG68 377 aa11.48□□□□□ -0.57
HDAC7-226ENST00000547259 OR7G3Q8NG95 312 aa11.48□□□□□ -0.57
HDAC7-226ENST00000547259 CPT1CQ8TCG5 803 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms