RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 PTPRQQ9UMZ3 2332 aa13.71□□□□□ -0.21
DDX54-203ENST00000546869 LAMA5O15230 3695 aa13.7□□□□□ -0.22
DDX54-203ENST00000546869 SGK494L7N484 410 aa13.7□□□□□ -0.22
DDX54-203ENST00000546869 PPP6CO00743 305 aa13.7□□□□□ -0.22
DDX54-203ENST00000546869 TRIM13O60858 407 aa13.7□□□□□ -0.22
DDX54-203ENST00000546869 UMODP07911 640 aa13.7□□□□□ -0.22
DDX54-203ENST00000546869 CREB1P16220 341 aa13.7□□□□□ -0.22
DDX54-203ENST00000546869 MMP11P24347 488 aa13.7□□□□□ -0.22
DDX54-203ENST00000546869 PTX3P26022 381 aaPredicted RBP13.7□□□□□ -0.22
DDX54-203ENST00000546869 HNRNPH1P31943 449 aaKnown RBP13.7□□□□□ -0.22
DDX54-203ENST00000546869 ETV4P43268 484 aa13.7□□□□□ -0.22
DDX54-203ENST00000546869 NAGLUP54802 743 aa13.7□□□□□ -0.22
DDX54-203ENST00000546869 RPS18P62269 152 aaKnown RBP13.7□□□□□ -0.22
DDX54-203ENST00000546869 PHEXP78562 749 aa13.7□□□□□ -0.22
DDX54-203ENST00000546869 CUL3Q13618 768 aa13.7□□□□□ -0.22
DDX54-203ENST00000546869 ERV3-1Q14264 604 aa13.7□□□□□ -0.22
DDX54-203ENST00000546869 PCLAFQ15004 111 aa13.7□□□□□ -0.22
DDX54-203ENST00000546869 ZRSR2Q15696 482 aaKnown RBP13.7□□□□□ -0.22
DDX54-203ENST00000546869 DEFB134Q4QY38 66 aa13.7□□□□□ -0.22
DDX54-203ENST00000546869 TOR1AIP1Q5JTV8 583 aa13.7□□□□□ -0.22
DDX54-203ENST00000546869 KHDRBS2Q5VWX1 349 aaKnown RBP13.7□□□□□ -0.22
DDX54-203ENST00000546869 FRG2Q64ET8 278 aa13.7□□□□□ -0.22
DDX54-203ENST00000546869 TRIM40Q6P9F5 258 aa13.7□□□□□ -0.22
DDX54-203ENST00000546869 MYLK4Q86YV6 388 aaPredicted RBP13.7□□□□□ -0.22
DDX54-203ENST00000546869 CCDC63Q8NA47 563 aa13.7□□□□□ -0.22
DDX54-203ENST00000546869 ARMC2Q8NEN0 867 aa13.7□□□□□ -0.22
DDX54-203ENST00000546869 OR51Q1Q8NH59 317 aa13.7□□□□□ -0.22
DDX54-203ENST00000546869 HUS1BQ8NHY5 278 aa13.7□□□□□ -0.22
DDX54-203ENST00000546869 ZCCHC10Q8TBK6 192 aa13.7□□□□□ -0.22
DDX54-203ENST00000546869 TRPC4APQ8TEL6 797 aa13.7□□□□□ -0.22
DDX54-203ENST00000546869 CCT6BQ92526 530 aa13.7□□□□□ -0.22
DDX54-203ENST00000546869 WBP1Q96G27 269 aa13.7□□□□□ -0.22
DDX54-203ENST00000546869 CRELD1Q96HD1 420 aa13.7□□□□□ -0.22
DDX54-203ENST00000546869 FAR2Q96K12 515 aa13.7□□□□□ -0.22
DDX54-203ENST00000546869 QRFPRQ96P65 431 aa13.7□□□□□ -0.22
DDX54-203ENST00000546869 FAM111AQ96PZ2 611 aa13.7□□□□□ -0.22
DDX54-203ENST00000546869 CDK15Q96Q40 435 aa13.7□□□□□ -0.22
DDX54-203ENST00000546869 FRG2BQ96QU4 278 aa13.7□□□□□ -0.22
DDX54-203ENST00000546869 TBCDQ9BTW9 1192 aa13.7□□□□□ -0.22
DDX54-203ENST00000546869 C12orf65Q9H3J6 166 aaKnown RBP13.7□□□□□ -0.22
DDX54-203ENST00000546869 PRDM7Q9NQW5 492 aa13.7□□□□□ -0.22
DDX54-203ENST00000546869 CTSFQ9UBX1 484 aa13.7□□□□□ -0.22
DDX54-203ENST00000546869 POLHQ9Y253 713 aa13.7□□□□□ -0.22
DDX54-203ENST00000546869 A0A1B0GTL3 188 aa13.69□□□□□ -0.22
DDX54-203ENST00000546869 TM9SF1O15321 606 aa13.69□□□□□ -0.22
DDX54-203ENST00000546869 ERI3O43414 337 aaKnown RBP13.69□□□□□ -0.22
DDX54-203ENST00000546869 SPAG7O75391 227 aa13.69□□□□□ -0.22
DDX54-203ENST00000546869 SCELO95171 688 aa13.69□□□□□ -0.22
DDX54-203ENST00000546869 BMP10O95393 424 aa13.69□□□□□ -0.22
DDX54-203ENST00000546869 ESRRBO95718 433 aa13.69□□□□□ -0.22
DDX54-203ENST00000546869 FURINP09958 794 aa13.69□□□□□ -0.22
DDX54-203ENST00000546869 PCNAP12004 261 aa13.69□□□□□ -0.22
DDX54-203ENST00000546869 SLC18A1P54219 525 aa13.69□□□□□ -0.22
DDX54-203ENST00000546869 RAB8AP61006 207 aa13.69□□□□□ -0.22
DDX54-203ENST00000546869 KLC1Q07866 573 aa13.69□□□□□ -0.22
DDX54-203ENST00000546869 GALNT1Q10472 559 aaPredicted RBP13.69□□□□□ -0.22
DDX54-203ENST00000546869 IL10RAQ13651 578 aa13.69□□□□□ -0.22
DDX54-203ENST00000546869 RBBP7Q16576 425 aa13.69□□□□□ -0.22
DDX54-203ENST00000546869 VWA2Q5GFL6 755 aa13.69□□□□□ -0.22
DDX54-203ENST00000546869 ADNP2Q6IQ32 1131 aa13.69□□□□□ -0.22
DDX54-203ENST00000546869 FRMD7Q6ZUT3 714 aa13.69□□□□□ -0.22
DDX54-203ENST00000546869 RPS27LQ71UM5 84 aaKnown RBP13.69□□□□□ -0.22
DDX54-203ENST00000546869 RAB43Q86YS6 212 aa13.69□□□□□ -0.22
DDX54-203ENST00000546869 C10orf107Q8IVU9 208 aa13.69□□□□□ -0.22
DDX54-203ENST00000546869 ZC3H7AQ8IWR0 971 aaKnown RBP13.69□□□□□ -0.22
DDX54-203ENST00000546869 CNDP1Q96KN2 507 aa13.69□□□□□ -0.22
DDX54-203ENST00000546869 KCNC2Q96PR1 638 aa13.69□□□□□ -0.22
DDX54-203ENST00000546869 TRMOQ9BU70 441 aa13.69□□□□□ -0.22
DDX54-203ENST00000546869 SLC29A3Q9BZD2 475 aa13.69□□□□□ -0.22
DDX54-203ENST00000546869 VIPAS39Q9H9C1 493 aa13.69□□□□□ -0.22
DDX54-203ENST00000546869 TMBIM4Q9HC24 238 aa13.69□□□□□ -0.22
DDX54-203ENST00000546869 DMRT3Q9NQL9 472 aa13.69□□□□□ -0.22
DDX54-203ENST00000546869 SLC17A7Q9P2U7 560 aa13.69□□□□□ -0.22
DDX54-203ENST00000546869 SNX6Q9UNH7 406 aa13.69□□□□□ -0.22
DDX54-203ENST00000546869 FER1L5A0AVI2 2057 aa13.68□□□□□ -0.22
DDX54-203ENST00000546869 A0A1W2PQ72 361 aa13.68□□□□□ -0.22
DDX54-203ENST00000546869 SERTM1A2A2V5 107 aa13.68□□□□□ -0.22
DDX54-203ENST00000546869 CDC14CA4D256 554 aa13.68□□□□□ -0.22
DDX54-203ENST00000546869 GOLGA6L10A6NI86 522 aa13.68□□□□□ -0.22
DDX54-203ENST00000546869 MAGEB17A8MXT2 336 aa13.68□□□□□ -0.22
DDX54-203ENST00000546869 C4orf51C9J302 202 aa13.68□□□□□ -0.22
DDX54-203ENST00000546869 ERVH48-1M5A8F1 160 aa13.68□□□□□ -0.22
DDX54-203ENST00000546869 CHST10O43529 356 aa13.68□□□□□ -0.22
DDX54-203ENST00000546869 RDH16O75452 317 aa13.68□□□□□ -0.22
DDX54-203ENST00000546869 TGFB1P01137 390 aa13.68□□□□□ -0.22
DDX54-203ENST00000546869 ENO1P06733 434 aaKnown RBP13.68□□□□□ -0.22
DDX54-203ENST00000546869 SERPINB5P36952 375 aa13.68□□□□□ -0.22
DDX54-203ENST00000546869 XCR1P46094 333 aa13.68□□□□□ -0.22
DDX54-203ENST00000546869 MTTPP55157 894 aa13.68□□□□□ -0.22
DDX54-203ENST00000546869 BTN3A2P78410 334 aa13.68□□□□□ -0.22
DDX54-203ENST00000546869 IFT88Q13099 833 aa13.68□□□□□ -0.22
DDX54-203ENST00000546869 LETMD1Q6P1Q0 360 aa13.68□□□□□ -0.22
DDX54-203ENST00000546869 GPRIN3Q6ZVF9 776 aa13.68□□□□□ -0.22
DDX54-203ENST00000546869 HDXQ7Z353 690 aa13.68□□□□□ -0.22
DDX54-203ENST00000546869 UBE3DQ7Z6J8 389 aa13.68□□□□□ -0.22
DDX54-203ENST00000546869 APLFQ8IW19 511 aaPredicted RBP13.68□□□□□ -0.22
DDX54-203ENST00000546869 CCNYL1Q8N7R7 359 aa13.68□□□□□ -0.22
DDX54-203ENST00000546869 LSM14AQ8ND56 463 aaKnown RBP13.68□□□□□ -0.22
DDX54-203ENST00000546869 OR6Y1Q8NGX8 325 aa13.68□□□□□ -0.22
DDX54-203ENST00000546869 ADAMTS18Q8TE60 1221 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms