RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 SFT2D3Q587I9 215 aa8.66□□□□□ -1.02
SSH1-205ENST00000546812 PAPD4Q6PIY7 484 aaKnown RBP8.66□□□□□ -1.02
SSH1-205ENST00000546812 CCDC25Q86WR0 208 aa8.66□□□□□ -1.02
SSH1-205ENST00000546812 ANKMY2Q8IV38 441 aa8.66□□□□□ -1.02
SSH1-205ENST00000546812 LIX1LQ8IVB5 337 aa8.66□□□□□ -1.02
SSH1-205ENST00000546812 SHISA5Q8N114 240 aa8.66□□□□□ -1.02
SSH1-205ENST00000546812 PDIK1LQ8N165 341 aa8.66□□□□□ -1.02
SSH1-205ENST00000546812 ZFP62Q8NB50 900 aaPredicted RBP8.66□□□□□ -1.02
SSH1-205ENST00000546812 OR52N2Q8NGI0 321 aa8.66□□□□□ -1.02
SSH1-205ENST00000546812 OR9A4Q8NGU2 314 aa8.66□□□□□ -1.02
SSH1-205ENST00000546812 OR51Q1Q8NH59 317 aa8.66□□□□□ -1.02
SSH1-205ENST00000546812 FBXO25Q8TCJ0 367 aa8.66□□□□□ -1.02
SSH1-205ENST00000546812 FAM222BQ8WU58 562 aa8.66□□□□□ -1.02
SSH1-205ENST00000546812 IFT81Q8WYA0 676 aa8.66□□□□□ -1.02
SSH1-205ENST00000546812 CFAP36Q96G28 342 aa8.66□□□□□ -1.02
SSH1-205ENST00000546812 SIGLEC10Q96LC7 697 aa8.66□□□□□ -1.02
SSH1-205ENST00000546812 WDR83Q9BRX9 315 aaKnown RBP8.66□□□□□ -1.02
SSH1-205ENST00000546812 TTYH2Q9BSA4 534 aa8.66□□□□□ -1.02
SSH1-205ENST00000546812 SARGQ9BW04 601 aa8.66□□□□□ -1.02
SSH1-205ENST00000546812 KIFC1Q9BW19 673 aa8.66□□□□□ -1.02
SSH1-205ENST00000546812 ACAT2Q9BWD1 397 aa8.66□□□□□ -1.02
SSH1-205ENST00000546812 TSSK1BQ9BXA7 367 aa8.66□□□□□ -1.02
SSH1-205ENST00000546812 MRPS30Q9NP92 439 aaKnown RBP8.66□□□□□ -1.02
SSH1-205ENST00000546812 FAM114A2Q9NRY5 505 aa8.66□□□□□ -1.02
SSH1-205ENST00000546812 ZDHHC18Q9NUE0 388 aa8.66□□□□□ -1.02
SSH1-205ENST00000546812 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.66□□□□□ -1.02
SSH1-205ENST00000546812 V9GYY5 206 aaPredicted RBP8.66□□□□□ -1.02
SSH1-205ENST00000546812 IGKV1-8A0A0C4DH67 115 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 A0A0G2JNJ9 132 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 KRT87PA6NCN2 255 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 IQCF5A8MTL0 148 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 NPIPA2E9PIF3 369 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 NPIPA3F8WFD2 350 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 SYT5O00445 386 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 P2RX6O15547 441 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 GOT2P00505 430 aaKnown RBP8.65□□□□□ -1.02
SSH1-205ENST00000546812 GLI4P10075 376 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 PGAM1P18669 254 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 ELK3P41970 407 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 XCR1P46094 333 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 MLF1P58340 268 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 SLC26A5P58743 744 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 SNRPNP63162 240 aaKnown RBP8.65□□□□□ -1.02
SSH1-205ENST00000546812 PRAMEP78395 509 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 NKX6-1P78426 367 aaPredicted RBP8.65□□□□□ -1.02
SSH1-205ENST00000546812 CAV1Q03135 178 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 ACVR1Q04771 509 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 PDIA2Q13087 525 aaKnown RBP8.65□□□□□ -1.02
SSH1-205ENST00000546812 USP10Q14694 798 aaKnown RBP8.65□□□□□ -1.02
SSH1-205ENST00000546812 CRYMQ14894 314 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 DAZAP2Q15038 168 aaPredicted RBP8.65□□□□□ -1.02
SSH1-205ENST00000546812 NSDHLQ15738 373 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 SHEQ5VZ18 495 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 ZNF425Q6IV72 752 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 PAOXQ6QHF9 649 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 AFTPHQ6ULP2 937 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 B3GNT6Q6ZMB0 384 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 CENPUQ71F23 418 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 IGDCC3Q8IVU1 814 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 GSPT2Q8IYD1 628 aaKnown RBP8.65□□□□□ -1.02
SSH1-205ENST00000546812 OTUD6BQ8N6M0 293 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 PLPP5Q8NEB5 264 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 OR6P1Q8NGX9 317 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 GSDMBQ8TAX9 411 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 LKAAEAR1Q8TD35 194 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 MCOLN3Q8TDD5 553 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 ELP5Q8TE02 316 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 MFSD3Q96ES6 412 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 COX4I2Q96KJ9 171 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 TTC1Q99614 292 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 SAYSD1Q9NPB0 183 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 RRAGDQ9NQL2 400 aaPredicted RBP8.65□□□□□ -1.02
SSH1-205ENST00000546812 DMRT3Q9NQL9 472 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 PNPLA3Q9NST1 481 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 TREX1Q9NSU2 369 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 UTP6Q9NYH9 597 aaKnown RBP8.65□□□□□ -1.02
SSH1-205ENST00000546812 SPATA7Q9P0W8 599 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 Q9UFV3 132 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 ADAM21Q9UKJ8 722 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 RIMKLBQ9ULI2 386 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 CBLCQ9ULV8 474 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 NFS1Q9Y697 457 aa8.65□□□□□ -1.02
SSH1-205ENST00000546812 SCN2AQ99250 2005 aa8.64□□□□□ -1.03
SSH1-205ENST00000546812 FIGNL2A6NMB9 653 aa8.64□□□□□ -1.03
SSH1-205ENST00000546812 GOLGA8KD6RF30 607 aa8.64□□□□□ -1.03
SSH1-205ENST00000546812 E7ESA3 106 aa8.64□□□□□ -1.03
SSH1-205ENST00000546812 GOLGA8TH3BQL2 631 aa8.64□□□□□ -1.03
SSH1-205ENST00000546812 VAPBO95292 243 aa8.64□□□□□ -1.03
SSH1-205ENST00000546812 NSA2O95478 260 aaKnown RBP8.64□□□□□ -1.03
SSH1-205ENST00000546812 EZRP15311 586 aaKnown RBP8.64□□□□□ -1.03
SSH1-205ENST00000546812 ARNTP27540 789 aa8.64□□□□□ -1.03
SSH1-205ENST00000546812 ECHS1P30084 290 aa8.64□□□□□ -1.03
SSH1-205ENST00000546812 CCNFP41002 786 aa8.64□□□□□ -1.03
SSH1-205ENST00000546812 BCL6P41182 706 aa8.64□□□□□ -1.03
SSH1-205ENST00000546812 BDKRB1P46663 353 aa8.64□□□□□ -1.03
SSH1-205ENST00000546812 NR0B1P51843 470 aaKnown RBP8.64□□□□□ -1.03
SSH1-205ENST00000546812 MPP1Q00013 466 aa8.64□□□□□ -1.03
SSH1-205ENST00000546812 RHAGQ02094 409 aa8.64□□□□□ -1.03
SSH1-205ENST00000546812 SEMA3AQ14563 771 aa8.64□□□□□ -1.03
SSH1-205ENST00000546812 ABRAXAS2Q15018 415 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms