RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 HCN4Q9Y3Q4 1203 aa13.65□□□□□ -0.22
SRP54-202ENST00000546080 A0A1B0GVM2 712 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 ZAR1LA6NP61 321 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 ARHGEF9O43307 516 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 PCDH7O60245 1069 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 CSF2P04141 144 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 ENDOUP21128 410 aaKnown RBP13.64□□□□□ -0.23
SRP54-202ENST00000546080 ITPKAP23677 461 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 CHMP24386 653 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 ERP29P30040 261 aaKnown RBP13.64□□□□□ -0.23
SRP54-202ENST00000546080 CNR2P34972 360 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 ATP5C1P36542 298 aaKnown RBP13.64□□□□□ -0.23
SRP54-202ENST00000546080 TGM4P49221 684 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 FOXD4Q12950 439 aaPredicted RBP13.64□□□□□ -0.23
SRP54-202ENST00000546080 QPRTQ15274 297 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 SF1Q15637 639 aaKnown RBP13.64□□□□□ -0.23
SRP54-202ENST00000546080 FAM110CQ1W6H9 321 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 SLC35F1Q5T1Q4 408 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 LDLRAD1Q5T700 205 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 CPTPQ5TA50 214 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 SYCE2Q6PIF2 218 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 XKRXQ6PP77 449 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 NLRP8Q86W28 1048 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 TRIM48Q8IWZ4 208 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 FAM217AQ8IXS0 508 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 SLC34A3Q8N130 599 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 ENKURQ8TC29 256 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 CLIP3Q96DZ5 547 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 PRRG3Q9BZD7 231 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 THSD1Q9NS62 852 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 DNAJC11Q9NVH1 559 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 TOR4AQ9NXH8 423 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 STMN3Q9NZ72 180 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 VPS29Q9UBQ0 182 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 SSR3Q9UNL2 185 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 NOD1Q9Y239 953 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 FCF1Q9Y324 198 aaKnown RBP13.64□□□□□ -0.23
SRP54-202ENST00000546080 Q9Y3F1 56 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 A0A0G2JMP0 313 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 MYADML2A6NDP7 307 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 PCDH17O14917 1159 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 TMCC2O75069 709 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 ZNF780AO75290 641 aaPredicted RBP13.64□□□□□ -0.23
SRP54-202ENST00000546080 CSO75390 466 aaKnown RBP13.64□□□□□ -0.23
SRP54-202ENST00000546080 CYP17A1P05093 508 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 CSF3P09919 207 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 JUPP14923 745 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 BPIP17213 487 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 POU1F1P28069 291 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 CRYBB2P43320 205 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 SLC6A12P48065 614 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 MXD1Q05195 221 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 ACSM2AQ08AH3 577 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 FCHO2Q0JRZ9 810 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 FAPQ12884 760 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 MAP2K5Q13163 448 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 CHIT1Q13231 466 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 DDX39BQ13838 428 aaKnown RBP13.64□□□□□ -0.23
SRP54-202ENST00000546080 LARS2Q15031 903 aaKnown RBP13.64□□□□□ -0.23
SRP54-202ENST00000546080 CCL14Q16627 93 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 GLYR1Q49A26 553 aaPredicted RBP13.64□□□□□ -0.23
SRP54-202ENST00000546080 ACSM2BQ68CK6 577 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 CHST9Q7L1S5 443 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 ARMCX6Q7L4S7 300 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 ZNF598Q86UK7 904 aaKnown RBP13.64□□□□□ -0.23
SRP54-202ENST00000546080 ELMOD2Q8IZ81 293 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 TCTE3Q8IZS6 198 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 CAMKK1Q8N5S9 505 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 AQP11Q8NBQ7 271 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 OR4A15Q8NGL6 344 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 PIH1D2Q8WWB5 315 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 BRI3BPQ8WY22 251 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 TRMT61AQ96FX7 289 aaKnown RBP13.64□□□□□ -0.23
SRP54-202ENST00000546080 MS4A4AQ96JQ5 239 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 RACGAP1Q9H0H5 632 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 PRM3Q9NNZ6 103 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 ABCB9Q9NP78 766 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 ZNF282Q9UDV7 671 aaPredicted RBP13.64□□□□□ -0.23
SRP54-202ENST00000546080 FTSJ1Q9UET6 329 aa13.64□□□□□ -0.23
SRP54-202ENST00000546080 LSM2Q9Y333 95 aaKnown RBP13.64□□□□□ -0.23
SRP54-202ENST00000546080 A0A0B4J293 547 aa13.63□□□□□ -0.23
SRP54-202ENST00000546080 HYKKA2RU49 373 aa13.63□□□□□ -0.23
SRP54-202ENST00000546080 FABP12A6NFH5 140 aa13.63□□□□□ -0.23
SRP54-202ENST00000546080 PRAMEF4O60810 478 aa13.63□□□□□ -0.23
SRP54-202ENST00000546080 CDRT1O95170 752 aa13.63□□□□□ -0.23
SRP54-202ENST00000546080 GADD45GO95257 159 aa13.63□□□□□ -0.23
SRP54-202ENST00000546080 CLDN7O95471 211 aa13.63□□□□□ -0.23
SRP54-202ENST00000546080 MYCP01106 439 aaPredicted RBP13.63□□□□□ -0.23
SRP54-202ENST00000546080 ZDHHC11BP0C7U3 371 aa13.63□□□□□ -0.23
SRP54-202ENST00000546080 ETFAP13804 333 aa13.63□□□□□ -0.23
SRP54-202ENST00000546080 ATF6P18850 670 aa13.63□□□□□ -0.23
SRP54-202ENST00000546080 HNMTP50135 292 aa13.63□□□□□ -0.23
SRP54-202ENST00000546080 CRISP1P54107 249 aa13.63□□□□□ -0.23
SRP54-202ENST00000546080 CASP9P55211 416 aa13.63□□□□□ -0.23
SRP54-202ENST00000546080 C21orf58P58505 322 aa13.63□□□□□ -0.23
SRP54-202ENST00000546080 EFR3AQ14156 821 aa13.63□□□□□ -0.23
SRP54-202ENST00000546080 VEPH1Q14D04 833 aa13.63□□□□□ -0.23
SRP54-202ENST00000546080 SPHARQ15513 63 aa13.63□□□□□ -0.23
SRP54-202ENST00000546080 FAM214AQ32MH5 1076 aa13.63□□□□□ -0.23
SRP54-202ENST00000546080 CYP27C1Q4G0S4 372 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms