RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 TRIM61Q5EBN2 209 aa8.31□□□□□ -1.08
CLIP1-218ENST00000545889 TNFAIP8L2Q6P589 184 aaPredicted RBP8.31□□□□□ -1.08
CLIP1-218ENST00000545889 ERICH5Q6P6B1 374 aa8.31□□□□□ -1.08
CLIP1-218ENST00000545889 TMIGD1Q6UXZ0 262 aa8.31□□□□□ -1.08
CLIP1-218ENST00000545889 TTLL10Q6ZVT0 673 aa8.31□□□□□ -1.08
CLIP1-218ENST00000545889 CXXC5Q7LFL8 322 aaKnown RBP8.31□□□□□ -1.08
CLIP1-218ENST00000545889 SNX29P2Q8IUI4 249 aa8.31□□□□□ -1.08
CLIP1-218ENST00000545889 SLC15A4Q8N697 577 aa8.31□□□□□ -1.08
CLIP1-218ENST00000545889 NAT8LQ8N9F0 302 aa8.31□□□□□ -1.08
CLIP1-218ENST00000545889 OLIG1Q8TAK6 271 aa8.31□□□□□ -1.08
CLIP1-218ENST00000545889 DAZLQ92904 295 aaKnown RBP8.31□□□□□ -1.08
CLIP1-218ENST00000545889 TOE1Q96GM8 510 aaKnown RBP8.31□□□□□ -1.08
CLIP1-218ENST00000545889 ZSWIM3Q96MP5 696 aa8.31□□□□□ -1.08
CLIP1-218ENST00000545889 MECRQ9BV79 373 aa8.31□□□□□ -1.08
CLIP1-218ENST00000545889 RBCK1Q9BYM8 510 aa8.31□□□□□ -1.08
CLIP1-218ENST00000545889 MOV10Q9HCE1 1003 aaKnown RBP8.31□□□□□ -1.08
CLIP1-218ENST00000545889 TMEM248Q9NWD8 314 aa8.31□□□□□ -1.08
CLIP1-218ENST00000545889 MARK1Q9P0L2 795 aa8.31□□□□□ -1.08
CLIP1-218ENST00000545889 A0A0G2JMZ2 1700 aa8.31□□□□□ -1.08
CLIP1-218ENST00000545889 ZDBF2Q9HCK1 2354 aa8.31□□□□□ -1.08
CLIP1-218ENST00000545889 H6PDO95479 791 aa8.31□□□□□ -1.08
CLIP1-218ENST00000545889 TAS2R39P59534 338 aa8.31□□□□□ -1.08
CLIP1-218ENST00000545889 CCDC58Q4VC31 144 aa8.31□□□□□ -1.08
CLIP1-218ENST00000545889 EIPR1Q53HC9 387 aa8.31□□□□□ -1.08
CLIP1-218ENST00000545889 TMEM198Q66K66 360 aa8.31□□□□□ -1.08
CLIP1-218ENST00000545889 C10orf107Q8IVU9 208 aa8.31□□□□□ -1.08
CLIP1-218ENST00000545889 CLEC1AQ8NC01 280 aa8.31□□□□□ -1.08
CLIP1-218ENST00000545889 SNX33Q8WV41 574 aa8.31□□□□□ -1.08
CLIP1-218ENST00000545889 NXPE3Q969Y0 559 aa8.31□□□□□ -1.08
CLIP1-218ENST00000545889 EPYCQ99645 322 aa8.31□□□□□ -1.08
CLIP1-218ENST00000545889 FEM1AQ9BSK4 669 aa8.31□□□□□ -1.08
CLIP1-218ENST00000545889 VN1R3Q9BXE9 311 aa8.31□□□□□ -1.08
CLIP1-218ENST00000545889 CHMP1AQ9HD42 196 aaPredicted RBP8.31□□□□□ -1.08
CLIP1-218ENST00000545889 SLC35C2Q9NQQ7 365 aa8.31□□□□□ -1.08
CLIP1-218ENST00000545889 PRTFDC1Q9NRG1 225 aa8.31□□□□□ -1.08
CLIP1-218ENST00000545889 C1orf109Q9NX04 203 aa8.31□□□□□ -1.08
CLIP1-218ENST00000545889 CCL26Q9Y258 94 aa8.31□□□□□ -1.08
CLIP1-218ENST00000545889 A0A1W2PRB8 838 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 OR51F1A6NGY5 319 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 SHISA7A6NL88 538 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 H3BNX3 289 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 SOCS5O75159 536 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 TCEA3O75764 348 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 CDC123O75794 336 aaPredicted RBP8.3□□□□□ -1.08
CLIP1-218ENST00000545889 CCNB2O95067 398 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 SERPINA1P01009 418 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 ERCC1P07992 297 aaPredicted RBP8.3□□□□□ -1.08
CLIP1-218ENST00000545889 HMGA1P17096 107 aaKnown RBP8.3□□□□□ -1.08
CLIP1-218ENST00000545889 CRISP3P54108 245 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 ZNF846Q147U1 533 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 ZFP69Q49AA0 526 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 RALGPS2Q86X27 583 aaPredicted RBP8.3□□□□□ -1.08
CLIP1-218ENST00000545889 SFRP1Q8N474 314 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 C1orf74Q96LT6 269 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 DUSP23Q9BVJ7 150 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 SPAG4Q9NPE6 437 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 CENPMQ9NSP4 180 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 PNPLA3Q9NST1 481 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 UPB1Q9UBR1 384 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 POMPQ9Y244 141 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 PCDHGA2Q9Y5H1 932 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 CEPT1Q9Y6K0 416 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 CLDN25C9JDP6 229 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 CST1P01037 141 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 KLKB1P03952 638 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 P04436 131 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 SRPRAP08240 638 aaKnown RBP8.3□□□□□ -1.08
CLIP1-218ENST00000545889 FOSL1P15407 271 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 PTX3P26022 381 aaPredicted RBP8.3□□□□□ -1.08
CLIP1-218ENST00000545889 KHKP50053 298 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 BMXP51813 675 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 ARFIP1P53367 373 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 DGCR6Q14129 220 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 PTPRCAPQ14761 206 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 KLHL26Q53HC5 615 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 KIAA1161Q6NSJ0 714 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 USP43Q70EL4 1123 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 SPATA19Q7Z5L4 167 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 APCDD1Q8J025 514 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 PIK3C3Q8NEB9 887 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 OR4C6Q8NH72 309 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 TSEN15Q8WW01 171 aaKnown RBP8.3□□□□□ -1.08
CLIP1-218ENST00000545889 TRIM2Q9C040 744 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 TIGARQ9NQ88 270 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 ACSS2Q9NR19 701 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 MRPL39Q9NYK5 338 aaKnown RBP8.3□□□□□ -1.08
CLIP1-218ENST00000545889 ADGRE2Q9UHX3 823 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 GLS2Q9UI32 602 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 RGSL1A5PLK6 1076 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 PRORSD1PA6NEY8 169 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 AURKAO14965 403 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 DNAJA2O60884 412 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 CD2P06729 351 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 CDH1P12830 882 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 ITIH1P19827 911 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 MYL9P24844 172 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 SLC26A3P40879 764 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 ETV3P41162 512 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 STAT5AP42229 794 aa8.3□□□□□ -1.08
CLIP1-218ENST00000545889 BDKRB1P46663 353 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms