RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 PEX6Q13608 980 aa6.39□□□□□ -1.39
LDHA-223ENST00000545215 SSPNQ14714 243 aa6.39□□□□□ -1.39
LDHA-223ENST00000545215 RAB39AQ14964 217 aa6.39□□□□□ -1.39
LDHA-223ENST00000545215 PPP1R7Q15435 360 aa6.39□□□□□ -1.39
LDHA-223ENST00000545215 CYTH1Q15438 398 aa6.39□□□□□ -1.39
LDHA-223ENST00000545215 UGP2Q16851 508 aa6.39□□□□□ -1.39
LDHA-223ENST00000545215 TMEM52BQ4KMG9 183 aa6.39□□□□□ -1.39
LDHA-223ENST00000545215 FAM209BQ5JX69 171 aa6.39□□□□□ -1.39
LDHA-223ENST00000545215 ANKRD20A2Q5SQ80 823 aa6.39□□□□□ -1.39
LDHA-223ENST00000545215 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.39□□□□□ -1.39
LDHA-223ENST00000545215 ANKRD20A1Q5TYW2 823 aa6.39□□□□□ -1.39
LDHA-223ENST00000545215 ANKRD20A3Q5VUR7 823 aa6.39□□□□□ -1.39
LDHA-223ENST00000545215 BRAT1Q6PJG6 821 aa6.39□□□□□ -1.39
LDHA-223ENST00000545215 LINC00523Q86TU6 105 aa6.39□□□□□ -1.39
LDHA-223ENST00000545215 PAQR7Q86WK9 346 aa6.39□□□□□ -1.39
LDHA-223ENST00000545215 CAMK1DQ8IU85 385 aa6.39□□□□□ -1.39
LDHA-223ENST00000545215 ZNF567Q8N184 647 aa6.39□□□□□ -1.39
LDHA-223ENST00000545215 MMGT1Q8N4V1 131 aa6.39□□□□□ -1.39
LDHA-223ENST00000545215 FAM71DQ8N9W8 422 aa6.39□□□□□ -1.39
LDHA-223ENST00000545215 SLC38A9Q8NBW4 561 aa6.39□□□□□ -1.39
LDHA-223ENST00000545215 PIK3C3Q8NEB9 887 aa6.39□□□□□ -1.39
LDHA-223ENST00000545215 IMP4Q96G21 291 aaKnown RBP6.39□□□□□ -1.39
LDHA-223ENST00000545215 ADGRE3Q9BY15 652 aa6.39□□□□□ -1.39
LDHA-223ENST00000545215 RAB17Q9H0T7 212 aa6.39□□□□□ -1.39
LDHA-223ENST00000545215 NT5MQ9NPB1 228 aa6.39□□□□□ -1.39
LDHA-223ENST00000545215 EIF2B3Q9NR50 452 aaKnown RBP6.39□□□□□ -1.39
LDHA-223ENST00000545215 PNPOQ9NVS9 261 aa6.39□□□□□ -1.39
LDHA-223ENST00000545215 FAM153AQ9UHL3 310 aa6.39□□□□□ -1.39
LDHA-223ENST00000545215 RSPH14Q9UHP6 348 aa6.39□□□□□ -1.39
LDHA-223ENST00000545215 RARRES3Q9UL19 164 aa6.39□□□□□ -1.39
LDHA-223ENST00000545215 UTP11Q9Y3A2 253 aaKnown RBP6.39□□□□□ -1.39
LDHA-223ENST00000545215 SNX13Q9Y5W8 968 aa6.39□□□□□ -1.39
LDHA-223ENST00000545215 A0A0G2JNJ9 132 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 A0A1W2PPL8 197 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 TSPAN11A1L157 253 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 MBD3L4A6NDZ8 208 aaPredicted RBP6.38□□□□□ -1.39
LDHA-223ENST00000545215 MBD3L5A6NJ08 208 aaPredicted RBP6.38□□□□□ -1.39
LDHA-223ENST00000545215 ISM1B1AKI9 464 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 E7EVH7 732 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 CACNB4O00305 520 aaPredicted RBP6.38□□□□□ -1.39
LDHA-223ENST00000545215 DNAJB6O75190 326 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 RASAL1O95294 804 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 WNT11O96014 354 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 KRT14P02533 472 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 HLA-DQB2P05538 268 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 TUBBP07437 444 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 AK4P27144 223 aaPredicted RBP6.38□□□□□ -1.39
LDHA-223ENST00000545215 VIPR1P32241 457 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 MMP12P39900 470 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 ADCY8P40145 1251 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 HADHAP40939 763 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 MC3RP41968 323 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 MAGEA6P43360 314 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 STT3AP46977 705 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 DRG2P55039 364 aaKnown RBP6.38□□□□□ -1.39
LDHA-223ENST00000545215 KIAA1024LP59773 190 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 CAV1Q03135 178 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 ZBTB17Q13105 803 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 MTM1Q13496 603 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 PTK6Q13882 451 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 KRTCAP3Q53RY4 240 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 C8orf74Q6P047 294 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 TTC27Q6P3X3 843 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 SLC30A9Q6PML9 568 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 PPP1R21Q6ZMI0 780 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 HOOK3Q86VS8 718 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 KLHL7Q8IXQ5 586 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 KLHDC8BQ8IXV7 354 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 MARVELD2Q8N4S9 558 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 C3orf56Q8N813 242 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 RNF152Q8N8N0 203 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 ARRDC2Q8TBH0 407 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 TADA1Q96BN2 335 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 LRFN5Q96NI6 719 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 LMF1Q96S06 567 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 KRT12Q99456 494 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 VRK1Q99986 396 aaPredicted RBP6.38□□□□□ -1.39
LDHA-223ENST00000545215 BEX2Q9BXY8 128 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 DDX47Q9H0S4 455 aaKnown RBP6.38□□□□□ -1.39
LDHA-223ENST00000545215 LRRC40Q9H9A6 602 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 BCO1Q9HAY6 547 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 P4HTMQ9NXG6 502 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 Q9UFV3 132 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 TTLL3Q9Y4R7 772 aa6.38□□□□□ -1.39
LDHA-223ENST00000545215 TRAV17A0A0B4J275 112 aa6.37□□□□□ -1.39
LDHA-223ENST00000545215 EFCAB8A8MWE9 144 aa6.37□□□□□ -1.39
LDHA-223ENST00000545215 PRAMEF4O60810 478 aa6.37□□□□□ -1.39
LDHA-223ENST00000545215 RECQL5O94762 991 aaPredicted RBP6.37□□□□□ -1.39
LDHA-223ENST00000545215 SUN1O94901 812 aa6.37□□□□□ -1.39
LDHA-223ENST00000545215 SLU7O95391 586 aaKnown RBP6.37□□□□□ -1.39
LDHA-223ENST00000545215 MATN4O95460 622 aa6.37□□□□□ -1.39
LDHA-223ENST00000545215 AP2A1O95782 977 aa6.37□□□□□ -1.39
LDHA-223ENST00000545215 KNG1P01042 644 aa6.37□□□□□ -1.39
LDHA-223ENST00000545215 AMY1AP04745 511 aa6.37□□□□□ -1.39
LDHA-223ENST00000545215 HOXC4P09017 264 aaPredicted RBP6.37□□□□□ -1.39
LDHA-223ENST00000545215 ELFN1P0C7U0 828 aa6.37□□□□□ -1.39
LDHA-223ENST00000545215 MLNP12872 115 aa6.37□□□□□ -1.39
LDHA-223ENST00000545215 PVRP15151 417 aa6.37□□□□□ -1.39
LDHA-223ENST00000545215 HLA-DPA1P20036 260 aa6.37□□□□□ -1.39
LDHA-223ENST00000545215 TPSB2P20231 275 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms