RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 PDIK1LQ8N165 341 aa13.23□□□□□ -0.29
DDX11-228ENST00000545115 SLC35F6Q8N357 371 aa13.23□□□□□ -0.29
DDX11-228ENST00000545115 ANKRD53Q8N9V6 530 aa13.23□□□□□ -0.29
DDX11-228ENST00000545115 SLCO2A1Q92959 643 aa13.23□□□□□ -0.29
DDX11-228ENST00000545115 TMEM125Q96AQ2 219 aa13.23□□□□□ -0.29
DDX11-228ENST00000545115 PDLIM5Q96HC4 596 aaKnown RBP13.23□□□□□ -0.29
DDX11-228ENST00000545115 AIF1LQ9BQI0 150 aa13.23□□□□□ -0.29
DDX11-228ENST00000545115 TRIM51Q9BSJ1 452 aa13.23□□□□□ -0.29
DDX11-228ENST00000545115 DDX47Q9H0S4 455 aaKnown RBP13.23□□□□□ -0.29
DDX11-228ENST00000545115 TRIM45Q9H8W5 580 aaPredicted RBP13.23□□□□□ -0.29
DDX11-228ENST00000545115 PLAC1Q9HBJ0 212 aa13.23□□□□□ -0.29
DDX11-228ENST00000545115 GPAMQ9HCL2 828 aa13.23□□□□□ -0.29
DDX11-228ENST00000545115 PRDM9Q9NQV7 894 aa13.23□□□□□ -0.29
DDX11-228ENST00000545115 DYRK1BQ9Y463 629 aa13.23□□□□□ -0.29
DDX11-228ENST00000545115 NCOA6Q14686 2063 aaPredicted RBP13.22□□□□□ -0.29
DDX11-228ENST00000545115 PKDREJQ9NTG1 2253 aa13.22□□□□□ -0.29
DDX11-228ENST00000545115 IGKV3D-11A0A0A0MRZ8 115 aa13.22□□□□□ -0.29
DDX11-228ENST00000545115 FCHO1O14526 889 aa13.22□□□□□ -0.29
DDX11-228ENST00000545115 ZNF37AP17032 561 aaPredicted RBP13.22□□□□□ -0.29
DDX11-228ENST00000545115 HNF4AP41235 474 aa13.22□□□□□ -0.29
DDX11-228ENST00000545115 MLF1P58340 268 aa13.22□□□□□ -0.29
DDX11-228ENST00000545115 RAB8AP61006 207 aa13.22□□□□□ -0.29
DDX11-228ENST00000545115 HYAL2Q12891 473 aa13.22□□□□□ -0.29
DDX11-228ENST00000545115 PPP1R3AQ16821 1122 aa13.22□□□□□ -0.29
DDX11-228ENST00000545115 THOC6Q86W42 341 aaKnown RBP13.22□□□□□ -0.29
DDX11-228ENST00000545115 EID3Q8N140 333 aa13.22□□□□□ -0.29
DDX11-228ENST00000545115 CPSF7Q8N684 471 aaKnown RBP13.22□□□□□ -0.29
DDX11-228ENST00000545115 ARMC2Q8NEN0 867 aa13.22□□□□□ -0.29
DDX11-228ENST00000545115 AGAP11Q8TF27 550 aa13.22□□□□□ -0.29
DDX11-228ENST00000545115 MTFMTQ96DP5 389 aaKnown RBP13.22□□□□□ -0.29
DDX11-228ENST00000545115 CFAP36Q96G28 342 aa13.22□□□□□ -0.29
DDX11-228ENST00000545115 LURAP1Q96LR2 239 aa13.22□□□□□ -0.29
DDX11-228ENST00000545115 TRIM8Q9BZR9 551 aa13.22□□□□□ -0.29
DDX11-228ENST00000545115 IKZF3Q9UKT9 509 aa13.22□□□□□ -0.29
DDX11-228ENST00000545115 SNX12Q9UMY4 172 aa13.22□□□□□ -0.29
DDX11-228ENST00000545115 CHMP2BQ9UQN3 213 aa13.22□□□□□ -0.29
DDX11-228ENST00000545115 SLC22A14Q9Y267 594 aa13.22□□□□□ -0.29
DDX11-228ENST00000545115 KCNE2Q9Y6J6 123 aa13.22□□□□□ -0.29
DDX11-228ENST00000545115 PCNX1Q96RV3 2341 aa13.21□□□□□ -0.29
DDX11-228ENST00000545115 CTAGE15A4D2H0 777 aa13.21□□□□□ -0.29
DDX11-228ENST00000545115 E9PLN8 166 aa13.21□□□□□ -0.29
DDX11-228ENST00000545115 PRRG2O14669 202 aa13.21□□□□□ -0.29
DDX11-228ENST00000545115 SERPINA6P08185 405 aa13.21□□□□□ -0.29
DDX11-228ENST00000545115 SMIM10L1P0DMW3 83 aa13.21□□□□□ -0.29
DDX11-228ENST00000545115 IVDP26440 423 aa13.21□□□□□ -0.29
DDX11-228ENST00000545115 TRHRP34981 398 aaPredicted RBP13.21□□□□□ -0.29
DDX11-228ENST00000545115 ELK3P41970 407 aa13.21□□□□□ -0.29
DDX11-228ENST00000545115 HLCSP50747 726 aa13.21□□□□□ -0.29
DDX11-228ENST00000545115 ITGA8P53708 1063 aa13.21□□□□□ -0.29
DDX11-228ENST00000545115 HSF1Q00613 529 aa13.21□□□□□ -0.29
DDX11-228ENST00000545115 MORF4L2Q15014 288 aa13.21□□□□□ -0.29
DDX11-228ENST00000545115 RBBP5Q15291 538 aaKnown RBP13.21□□□□□ -0.29
DDX11-228ENST00000545115 CDSNQ15517 529 aa13.21□□□□□ -0.29
DDX11-228ENST00000545115 HP1BP3Q5SSJ5 553 aaPredicted RBP13.21□□□□□ -0.29
DDX11-228ENST00000545115 TRMT10BQ6PF06 316 aaKnown RBP13.21□□□□□ -0.29
DDX11-228ENST00000545115 NXPE4Q6UWF7 544 aa13.21□□□□□ -0.29
DDX11-228ENST00000545115 CTAGE6Q86UF2 777 aa13.21□□□□□ -0.29
DDX11-228ENST00000545115 ZNF227Q86WZ6 799 aa13.21□□□□□ -0.29
DDX11-228ENST00000545115 CHERPQ8IWX8 916 aaKnown RBP13.21□□□□□ -0.29
DDX11-228ENST00000545115 ARMC10Q8N2F6 343 aa13.21□□□□□ -0.29
DDX11-228ENST00000545115 POGLUT1Q8NBL1 392 aa13.21□□□□□ -0.29
DDX11-228ENST00000545115 NFAM1Q8NET5 270 aaPredicted RBP13.21□□□□□ -0.29
DDX11-228ENST00000545115 PHF10Q8WUB8 498 aaKnown RBP13.21□□□□□ -0.29
DDX11-228ENST00000545115 ANKRD7Q92527 254 aa13.21□□□□□ -0.29
DDX11-228ENST00000545115 LRRC39Q96DD0 335 aa13.21□□□□□ -0.29
DDX11-228ENST00000545115 SMIM10Q96HG1 83 aa13.21□□□□□ -0.29
DDX11-228ENST00000545115 EGFL8Q99944 293 aa13.21□□□□□ -0.29
DDX11-228ENST00000545115 VKORC1Q9BQB6 163 aa13.21□□□□□ -0.29
DDX11-228ENST00000545115 WDR83Q9BRX9 315 aaKnown RBP13.21□□□□□ -0.29
DDX11-228ENST00000545115 DEFB126Q9BYW3 111 aa13.21□□□□□ -0.29
DDX11-228ENST00000545115 RHBGQ9H310 441 aa13.21□□□□□ -0.29
DDX11-228ENST00000545115 NECTIN3Q9NQS3 549 aa13.21□□□□□ -0.29
DDX11-228ENST00000545115 ZFATQ9P243 1243 aa13.21□□□□□ -0.29
DDX11-228ENST00000545115 KLF13Q9Y2Y9 288 aaPredicted RBP13.21□□□□□ -0.29
DDX11-228ENST00000545115 APCP25054 2843 aa13.21□□□□□ -0.3
DDX11-228ENST00000545115 A8MUA0 341 aa13.2□□□□□ -0.3
DDX11-228ENST00000545115 C4orf51C9J302 202 aa13.2□□□□□ -0.3
DDX11-228ENST00000545115 POU3F2P20265 443 aaPredicted RBP13.2□□□□□ -0.3
DDX11-228ENST00000545115 CLCN2P51788 898 aa13.2□□□□□ -0.3
DDX11-228ENST00000545115 STXBP1P61764 594 aaKnown RBP13.2□□□□□ -0.3
DDX11-228ENST00000545115 CDKL1Q00532 357 aa13.2□□□□□ -0.3
DDX11-228ENST00000545115 TERF2Q15554 542 aa13.2□□□□□ -0.3
DDX11-228ENST00000545115 TOR1AIP1Q5JTV8 583 aa13.2□□□□□ -0.3
DDX11-228ENST00000545115 RNFT1Q5M7Z0 435 aa13.2□□□□□ -0.3
DDX11-228ENST00000545115 STEAP4Q687X5 459 aa13.2□□□□□ -0.3
DDX11-228ENST00000545115 NCCRP1Q6ZVX7 275 aaPredicted RBP13.2□□□□□ -0.3
DDX11-228ENST00000545115 DOLPP1Q86YN1 238 aa13.2□□□□□ -0.3
DDX11-228ENST00000545115 CA13Q8N1Q1 262 aa13.2□□□□□ -0.3
DDX11-228ENST00000545115 NKAPQ8N5F7 415 aaKnown RBP13.2□□□□□ -0.3
DDX11-228ENST00000545115 APCDD1LQ8NCL9 501 aa13.2□□□□□ -0.3
DDX11-228ENST00000545115 B3GNT7Q8NFL0 401 aa13.2□□□□□ -0.3
DDX11-228ENST00000545115 CREB3L4Q8TEY5 395 aa13.2□□□□□ -0.3
DDX11-228ENST00000545115 KLHL31Q9H511 634 aa13.2□□□□□ -0.3
DDX11-228ENST00000545115 MMACHCQ9Y4U1 282 aa13.2□□□□□ -0.3
DDX11-228ENST00000545115 ASB1Q9Y576 335 aa13.2□□□□□ -0.3
DDX11-228ENST00000545115 TEX264Q9Y6I9 313 aa13.2□□□□□ -0.3
DDX11-228ENST00000545115 FBN2P35556 2912 aa13.19□□□□□ -0.3
DDX11-228ENST00000545115 CSMD2Q7Z408 3487 aa13.19□□□□□ -0.3
DDX11-228ENST00000545115 TRBV11-1A0A0K0K1C0 115 aa13.19□□□□□ -0.3
DDX11-228ENST00000545115 FAM95CA0A1B0GW59 222 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms