RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 TRPV3Q8NET8 790 aa15.25■□□□□ 0.03
DDX55-212ENST00000544738 SUN3Q8TAQ9 357 aa15.25■□□□□ 0.03
DDX55-212ENST00000544738 NT5CQ8TCD5 201 aa15.25■□□□□ 0.03
DDX55-212ENST00000544738 PYROXD1Q8WU10 500 aa15.25■□□□□ 0.03
DDX55-212ENST00000544738 EGFL8Q99944 293 aa15.25■□□□□ 0.03
DDX55-212ENST00000544738 SPOCK3Q9BQ16 436 aa15.25■□□□□ 0.03
DDX55-212ENST00000544738 AIF1LQ9BQI0 150 aa15.25■□□□□ 0.03
DDX55-212ENST00000544738 TMUB1Q9BVT8 246 aa15.25■□□□□ 0.03
DDX55-212ENST00000544738 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.25■□□□□ 0.03
DDX55-212ENST00000544738 RHOJQ9H4E5 214 aa15.25■□□□□ 0.03
DDX55-212ENST00000544738 CTNNAL1Q9UBT7 734 aa15.25■□□□□ 0.03
DDX55-212ENST00000544738 PYCARDQ9ULZ3 195 aa15.25■□□□□ 0.03
DDX55-212ENST00000544738 PCDHGB6Q9Y5F9 930 aa15.25■□□□□ 0.03
DDX55-212ENST00000544738 PRRC2AP48634 2157 aaKnown RBP15.24■□□□□ 0.03
DDX55-212ENST00000544738 MAGEB17A8MXT2 336 aa15.24■□□□□ 0.03
DDX55-212ENST00000544738 CDC7O00311 574 aa15.24■□□□□ 0.03
DDX55-212ENST00000544738 EIF3HO15372 352 aaKnown RBP eCLIP15.24■□□□□ 0.03
DDX55-212ENST00000544738 WDPCPO95876 746 aa15.24■□□□□ 0.03
DDX55-212ENST00000544738 F10P00742 488 aa15.24■□□□□ 0.03
DDX55-212ENST00000544738 SERPIND1P05546 499 aa15.24■□□□□ 0.03
DDX55-212ENST00000544738 CELA2AP08217 269 aa15.24■□□□□ 0.03
DDX55-212ENST00000544738 DRD2P14416 443 aa15.24■□□□□ 0.03
DDX55-212ENST00000544738 AGAP20933 346 aa15.24■□□□□ 0.03
DDX55-212ENST00000544738 JAK1P23458 1154 aa15.24■□□□□ 0.03
DDX55-212ENST00000544738 SCTRP47872 440 aa15.24■□□□□ 0.03
DDX55-212ENST00000544738 POU4F1Q01851 419 aa15.24■□□□□ 0.03
DDX55-212ENST00000544738 ZNF33BQ06732 778 aa15.24■□□□□ 0.03
DDX55-212ENST00000544738 ABRAXAS2Q15018 415 aa15.24■□□□□ 0.03
DDX55-212ENST00000544738 NSDHLQ15738 373 aa15.24■□□□□ 0.03
DDX55-212ENST00000544738 C3AR1Q16581 482 aa15.24■□□□□ 0.03
DDX55-212ENST00000544738 DEFB134Q4QY38 66 aa15.24■□□□□ 0.03
DDX55-212ENST00000544738 H3F3CQ6NXT2 135 aa15.24■□□□□ 0.03
DDX55-212ENST00000544738 MEX3BQ6ZN04 569 aaKnown RBP15.24■□□□□ 0.03
DDX55-212ENST00000544738 FRA10AC1Q70Z53 315 aa15.24■□□□□ 0.03
DDX55-212ENST00000544738 M1APQ8TC57 530 aa15.24■□□□□ 0.03
DDX55-212ENST00000544738 CDKL2Q92772 493 aa15.24■□□□□ 0.03
DDX55-212ENST00000544738 PEX11GQ96HA9 241 aa15.24■□□□□ 0.03
DDX55-212ENST00000544738 ZNF354BQ96LW1 612 aa15.24■□□□□ 0.03
DDX55-212ENST00000544738 TSNARE1Q96NA8 513 aa15.24■□□□□ 0.03
DDX55-212ENST00000544738 LPAR4Q99677 370 aa15.24■□□□□ 0.03
DDX55-212ENST00000544738 ERP44Q9BS26 406 aa15.24■□□□□ 0.03
DDX55-212ENST00000544738 GPAMQ9HCL2 828 aa15.24■□□□□ 0.03
DDX55-212ENST00000544738 WHRNQ9P202 907 aa15.24■□□□□ 0.03
DDX55-212ENST00000544738 TXNDC16Q9P2K2 825 aa15.24■□□□□ 0.03
DDX55-212ENST00000544738 IKZF3Q9UKT9 509 aa15.24■□□□□ 0.03
DDX55-212ENST00000544738 SLC22A14Q9Y267 594 aa15.24■□□□□ 0.03
DDX55-212ENST00000544738 OARD1Q9Y530 152 aa15.24■□□□□ 0.03
DDX55-212ENST00000544738 SCN3AQ9NY46 2000 aa15.24■□□□□ 0.03
DDX55-212ENST00000544738 ZNF469Q96JG9 3925 aaPredicted RBP15.23■□□□□ 0.03
DDX55-212ENST00000544738 IGHV3-20A0A0C4DH32 117 aa15.23■□□□□ 0.03
DDX55-212ENST00000544738 OR5H15A6NDH6 313 aa15.23■□□□□ 0.03
DDX55-212ENST00000544738 NPEPPSL1A6NEC2 478 aa15.23■□□□□ 0.03
DDX55-212ENST00000544738 A8MUI8 341 aa15.23■□□□□ 0.03
DDX55-212ENST00000544738 SLC19A2O60779 497 aa15.23■□□□□ 0.03
DDX55-212ENST00000544738 CRYABP02511 175 aaKnown RBP15.23■□□□□ 0.03
DDX55-212ENST00000544738 GNAZP19086 355 aa15.23■□□□□ 0.03
DDX55-212ENST00000544738 REEP5Q00765 189 aa15.23■□□□□ 0.03
DDX55-212ENST00000544738 RHAGQ02094 409 aa15.23■□□□□ 0.03
DDX55-212ENST00000544738 ACTN3Q08043 901 aaPredicted RBP15.23■□□□□ 0.03
DDX55-212ENST00000544738 NXPE4Q6UWF7 544 aa15.23■□□□□ 0.03
DDX55-212ENST00000544738 CYS1Q717R9 158 aa15.23■□□□□ 0.03
DDX55-212ENST00000544738 ADAMTS18Q8TE60 1221 aa15.23■□□□□ 0.03
DDX55-212ENST00000544738 TBC1D20Q96BZ9 403 aa15.23■□□□□ 0.03
DDX55-212ENST00000544738 TSPAN17Q96FV3 270 aa15.23■□□□□ 0.03
DDX55-212ENST00000544738 MCMBPQ9BTE3 642 aa15.23■□□□□ 0.03
DDX55-212ENST00000544738 LANCL2Q9NS86 450 aa15.23■□□□□ 0.03
DDX55-212ENST00000544738 ABI3Q9P2A4 366 aa15.23■□□□□ 0.03
DDX55-212ENST00000544738 TINAGQ9UJW2 476 aa15.23■□□□□ 0.03
DDX55-212ENST00000544738 OR2W5A6NFC9 320 aa15.22■□□□□ 0.03
DDX55-212ENST00000544738 ZNF860A6NHJ4 632 aa15.22■□□□□ 0.03
DDX55-212ENST00000544738 CHST10O43529 356 aa15.22■□□□□ 0.03
DDX55-212ENST00000544738 H2AFYO75367 372 aaKnown RBP15.22■□□□□ 0.03
DDX55-212ENST00000544738 WISP2O76076 250 aa15.22■□□□□ 0.03
DDX55-212ENST00000544738 RASAL1O95294 804 aa15.22■□□□□ 0.03
DDX55-212ENST00000544738 FHP07954 510 aa15.22■□□□□ 0.03
DDX55-212ENST00000544738 ZNF888P0CJ79 500 aaPredicted RBP15.22■□□□□ 0.03
DDX55-212ENST00000544738 ZNF460Q14592 562 aa15.22■□□□□ 0.03
DDX55-212ENST00000544738 RBBP5Q15291 538 aaKnown RBP15.22■□□□□ 0.03
DDX55-212ENST00000544738 SFT2D3Q587I9 215 aa15.22■□□□□ 0.03
DDX55-212ENST00000544738 ACER2Q5QJU3 275 aa15.22■□□□□ 0.03
DDX55-212ENST00000544738 PAPD4Q6PIY7 484 aaKnown RBP15.22■□□□□ 0.03
DDX55-212ENST00000544738 TMPRSS11BQ86T26 416 aa15.22■□□□□ 0.03
DDX55-212ENST00000544738 ANKRD53Q8N9V6 530 aa15.22■□□□□ 0.03
DDX55-212ENST00000544738 SPATA4Q8NEY3 305 aa15.22■□□□□ 0.03
DDX55-212ENST00000544738 TTLQ8NG68 377 aa15.22■□□□□ 0.03
DDX55-212ENST00000544738 OR5T3Q8NGG3 340 aa15.22■□□□□ 0.03
DDX55-212ENST00000544738 DNAJB8Q8NHS0 232 aa15.22■□□□□ 0.03
DDX55-212ENST00000544738 ANKRD49Q8WVL7 239 aa15.22■□□□□ 0.03
DDX55-212ENST00000544738 CAPS2Q9BXY5 557 aa15.22■□□□□ 0.03
DDX55-212ENST00000544738 SLC6A16Q9GZN6 736 aa15.22■□□□□ 0.03
DDX55-212ENST00000544738 DERL2Q9GZP9 239 aa15.22■□□□□ 0.03
DDX55-212ENST00000544738 DPH5Q9H2P9 285 aa15.22■□□□□ 0.03
DDX55-212ENST00000544738 SPNS1Q9H2V7 528 aa15.22■□□□□ 0.03
DDX55-212ENST00000544738 KCNK13Q9HB14 408 aa15.22■□□□□ 0.03
DDX55-212ENST00000544738 MMP25Q9NPA2 562 aa15.22■□□□□ 0.03
DDX55-212ENST00000544738 CACNA1CQ13936 2221 aa15.22■□□□□ 0.03
DDX55-212ENST00000544738 ABCA4P78363 2273 aa15.21■□□□□ 0.03
DDX55-212ENST00000544738 FANCGO15287 622 aa15.21■□□□□ 0.03
DDX55-212ENST00000544738 PRAMEF2O60811 474 aa15.21■□□□□ 0.03
DDX55-212ENST00000544738 CDC123O75794 336 aaPredicted RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms