RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 GMEB2Q9UKD1 530 aa28.99■■■□□ 2.23
CCM2-219ENST00000544363 WBP11Q9Y2W2 641 aaKnown RBP28.99■■■□□ 2.23
CCM2-219ENST00000544363 PCDHGA5Q9Y5G8 931 aa28.99■■■□□ 2.23
CCM2-219ENST00000544363 LOC105369274A0A096LPK9 316 aa28.98■■■□□ 2.23
CCM2-219ENST00000544363 LOC102723532A0A0G2JNH3 316 aa28.98■■■□□ 2.23
CCM2-219ENST00000544363 H0YGG7 62 aa28.98■■■□□ 2.23
CCM2-219ENST00000544363 FXYD1O00168 92 aa28.98■■■□□ 2.23
CCM2-219ENST00000544363 SSR2P43308 183 aa28.98■■■□□ 2.23
CCM2-219ENST00000544363 KIR3DL1P43629 444 aa28.98■■■□□ 2.23
CCM2-219ENST00000544363 NUBP1P53384 320 aa28.98■■■□□ 2.23
CCM2-219ENST00000544363 MAPK12P53778 367 aa28.98■■■□□ 2.23
CCM2-219ENST00000544363 ARF3P61204 181 aaPredicted RBP28.98■■■□□ 2.23
CCM2-219ENST00000544363 ELF3P78545 371 aaPredicted RBP28.98■■■□□ 2.23
CCM2-219ENST00000544363 NR0B2Q15466 257 aa28.98■■■□□ 2.23
CCM2-219ENST00000544363 IKBIPQ70UQ0 350 aa28.98■■■□□ 2.23
CCM2-219ENST00000544363 GPR180Q86V85 440 aa28.98■■■□□ 2.23
CCM2-219ENST00000544363 OR4N4Q8N0Y3 316 aa28.98■■■□□ 2.23
CCM2-219ENST00000544363 MINDY1Q8N5J2 469 aa28.98■■■□□ 2.23
CCM2-219ENST00000544363 FAM181AQ8N9Y4 354 aa28.98■■■□□ 2.23
CCM2-219ENST00000544363 OR6C4Q8NGE1 309 aa28.98■■■□□ 2.23
CCM2-219ENST00000544363 TGM7Q96PF1 710 aa28.98■■■□□ 2.23
CCM2-219ENST00000544363 TBCDQ9BTW9 1192 aa28.98■■■□□ 2.23
CCM2-219ENST00000544363 REEP4Q9H6H4 257 aa28.98■■■□□ 2.23
CCM2-219ENST00000544363 PRDM7Q9NQW5 492 aa28.98■■■□□ 2.23
CCM2-219ENST00000544363 EXO1Q9UQ84 846 aaKnown RBP28.98■■■□□ 2.23
CCM2-219ENST00000544363 A0A0G2JN53 185 aa28.98■■■□□ 2.23
CCM2-219ENST00000544363 GABRR3A8MPY1 467 aa28.98■■■□□ 2.23
CCM2-219ENST00000544363 C4orf51C9J302 202 aa28.98■■■□□ 2.23
CCM2-219ENST00000544363 B4GAT1O43505 415 aa28.98■■■□□ 2.23
CCM2-219ENST00000544363 SIGLEC6O43699 453 aa28.98■■■□□ 2.23
CCM2-219ENST00000544363 GFERP55789 205 aa28.98■■■□□ 2.23
CCM2-219ENST00000544363 GPLD1P80108 840 aa28.98■■■□□ 2.23
CCM2-219ENST00000544363 FOXM1Q08050 763 aa28.98■■■□□ 2.23
CCM2-219ENST00000544363 TGM3Q08188 693 aa28.98■■■□□ 2.23
CCM2-219ENST00000544363 C2orf80Q0P641 193 aa28.98■■■□□ 2.23
CCM2-219ENST00000544363 MSANTD1Q6ZTZ1 278 aa28.98■■■□□ 2.23
CCM2-219ENST00000544363 CAMKMTQ7Z624 323 aa28.98■■■□□ 2.23
CCM2-219ENST00000544363 KCT2Q8NC54 265 aa28.98■■■□□ 2.23
CCM2-219ENST00000544363 OR8J2Q8NGG1 315 aa28.98■■■□□ 2.23
CCM2-219ENST00000544363 GTF2H4Q92759 462 aa28.98■■■□□ 2.23
CCM2-219ENST00000544363 CD180Q99467 661 aa28.98■■■□□ 2.23
CCM2-219ENST00000544363 PRPF18Q99633 342 aaKnown RBP28.98■■■□□ 2.23
CCM2-219ENST00000544363 SLC39A3Q9BRY0 314 aa28.98■■■□□ 2.23
CCM2-219ENST00000544363 FAM60AQ9NP50 221 aa28.98■■■□□ 2.23
CCM2-219ENST00000544363 ATP6V1HQ9UI12 483 aa28.98■■■□□ 2.23
CCM2-219ENST00000544363 R4GN57 208 aa28.98■■■□□ 2.23
CCM2-219ENST00000544363 A0A0A6YYD5 115 aa28.97■■■□□ 2.23
CCM2-219ENST00000544363 TLCD2A6NGC4 264 aa28.97■■■□□ 2.23
CCM2-219ENST00000544363 P2RX6O15547 441 aa28.97■■■□□ 2.23
CCM2-219ENST00000544363 DUX1O43812 170 aa28.97■■■□□ 2.23
CCM2-219ENST00000544363 SH3BP5O60239 455 aa28.97■■■□□ 2.23
CCM2-219ENST00000544363 TSFMP43897 325 aaKnown RBP28.97■■■□□ 2.23
CCM2-219ENST00000544363 GSTM5P46439 218 aa28.97■■■□□ 2.23
CCM2-219ENST00000544363 GLIPR1L2Q4G1C9 344 aa28.97■■■□□ 2.23
CCM2-219ENST00000544363 PRMT9Q6P2P2 845 aa28.97■■■□□ 2.23
CCM2-219ENST00000544363 ZNF793Q6ZN11 406 aa28.97■■■□□ 2.23
CCM2-219ENST00000544363 FBXW8Q8N3Y1 598 aa28.97■■■□□ 2.23
CCM2-219ENST00000544363 Q8N9G6 341 aaPredicted RBP28.97■■■□□ 2.23
CCM2-219ENST00000544363 GAL3ST3Q96A11 431 aa28.97■■■□□ 2.23
CCM2-219ENST00000544363 TM4SF18Q96CE8 201 aa28.97■■■□□ 2.23
CCM2-219ENST00000544363 RMND5AQ9H871 391 aa28.97■■■□□ 2.23
CCM2-219ENST00000544363 SPAG4Q9NPE6 437 aa28.97■■■□□ 2.23
CCM2-219ENST00000544363 SLAMF8Q9P0V8 285 aa28.97■■■□□ 2.23
CCM2-219ENST00000544363 KIF1CO43896 1103 aaKnown RBP28.96■■■□□ 2.23
CCM2-219ENST00000544363 IL3P08700 152 aa28.96■■■□□ 2.23
CCM2-219ENST00000544363 PNLIPP16233 465 aa28.96■■■□□ 2.23
CCM2-219ENST00000544363 RPL3P39023 403 aaKnown RBP28.96■■■□□ 2.23
CCM2-219ENST00000544363 MTTPP55157 894 aa28.96■■■□□ 2.23
CCM2-219ENST00000544363 CCDC6Q16204 474 aa28.96■■■□□ 2.23
CCM2-219ENST00000544363 CPTPQ5TA50 214 aa28.96■■■□□ 2.23
CCM2-219ENST00000544363 OR4F3Q6IEY1 312 aa28.96■■■□□ 2.23
CCM2-219ENST00000544363 DLEU7Q6UYE1 221 aa28.96■■■□□ 2.23
CCM2-219ENST00000544363 R3HCC1LQ7Z5L2 792 aaKnown RBP28.96■■■□□ 2.23
CCM2-219ENST00000544363 DHDDSQ86SQ9 333 aa28.96■■■□□ 2.23
CCM2-219ENST00000544363 EFCAB3Q8N7B9 438 aa28.96■■■□□ 2.23
CCM2-219ENST00000544363 AMER3Q8N944 861 aa28.96■■■□□ 2.23
CCM2-219ENST00000544363 CCDC74AQ96AQ1 378 aa28.96■■■□□ 2.23
CCM2-219ENST00000544363 COQ8BQ96D53 544 aa28.96■■■□□ 2.23
CCM2-219ENST00000544363 TCTN2Q96GX1 697 aa28.96■■■□□ 2.23
CCM2-219ENST00000544363 GTPBP2Q9BX10 602 aaKnown RBP28.96■■■□□ 2.23
CCM2-219ENST00000544363 SMOC1Q9H4F8 434 aa28.96■■■□□ 2.23
CCM2-219ENST00000544363 SLC7A8Q9UHI5 535 aa28.96■■■□□ 2.23
CCM2-219ENST00000544363 RAB23Q9ULC3 237 aa28.96■■■□□ 2.23
CCM2-219ENST00000544363 BTBD3Q9Y2F9 522 aa28.96■■■□□ 2.23
CCM2-219ENST00000544363 LY6G6EA0A0G2JKS1 128 aa28.95■■■□□ 2.23
CCM2-219ENST00000544363 TNFRSF10AO00220 468 aa28.95■■■□□ 2.23
CCM2-219ENST00000544363 TMPRSS11DO60235 418 aa28.95■■■□□ 2.23
CCM2-219ENST00000544363 PCDHGA12O60330 932 aa28.95■■■□□ 2.23
CCM2-219ENST00000544363 KCNH1O95259 989 aa28.95■■■□□ 2.23
CCM2-219ENST00000544363 FURINP09958 794 aa28.95■■■□□ 2.23
CCM2-219ENST00000544363 PIM1P11309 404 aaPredicted RBP28.95■■■□□ 2.23
CCM2-219ENST00000544363 TRA2BP62995 288 aaKnown RBP28.95■■■□□ 2.23
CCM2-219ENST00000544363 MC1RQ01726 317 aa28.95■■■□□ 2.23
CCM2-219ENST00000544363 PDE7AQ13946 482 aa28.95■■■□□ 2.23
CCM2-219ENST00000544363 CAPRIN1Q14444 709 aaKnown RBP28.95■■■□□ 2.23
CCM2-219ENST00000544363 ZC3H12BQ5HYM0 836 aaKnown RBP28.95■■■□□ 2.23
CCM2-219ENST00000544363 ANKRD26P1Q6NSI1 321 aa28.95■■■□□ 2.23
CCM2-219ENST00000544363 ZC3H14Q6PJT7 736 aaKnown RBP28.95■■■□□ 2.23
CCM2-219ENST00000544363 EID2Q8N6I1 236 aa28.95■■■□□ 2.23
CCM2-219ENST00000544363 ZNF655Q8N720 491 aaPredicted RBP28.95■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms