RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 FCN2Q15485 313 aa12.2□□□□□ -0.46
SMG8-202ENST00000543872 CTSL3PQ5NE16 218 aa12.2□□□□□ -0.46
SMG8-202ENST00000543872 LRIF1Q5T3J3 769 aa12.2□□□□□ -0.46
SMG8-202ENST00000543872 BRAT1Q6PJG6 821 aa12.2□□□□□ -0.46
SMG8-202ENST00000543872 MBOAT1Q6ZNC8 495 aa12.2□□□□□ -0.46
SMG8-202ENST00000543872 ZNF600Q6ZNG1 722 aa12.2□□□□□ -0.46
SMG8-202ENST00000543872 BCDIN3DQ7Z5W3 292 aaKnown RBP12.2□□□□□ -0.46
SMG8-202ENST00000543872 KIF18BQ86Y91 864 aa12.2□□□□□ -0.46
SMG8-202ENST00000543872 DNAJC5GQ8N7S2 189 aa12.2□□□□□ -0.46
SMG8-202ENST00000543872 SYT14Q8NB59 555 aa12.2□□□□□ -0.46
SMG8-202ENST00000543872 MTMR14Q8NCE2 650 aa12.2□□□□□ -0.46
SMG8-202ENST00000543872 RBFOX1Q9NWB1 397 aaKnown RBP12.2□□□□□ -0.46
SMG8-202ENST00000543872 ELOVL2Q9NXB9 296 aa12.2□□□□□ -0.46
SMG8-202ENST00000543872 ING4Q9UNL4 249 aa12.2□□□□□ -0.46
SMG8-202ENST00000543872 YARS2Q9Y2Z4 477 aaKnown RBP12.2□□□□□ -0.46
SMG8-202ENST00000543872 UTRNP46939 3433 aa12.2□□□□□ -0.46
SMG8-202ENST00000543872 MANBAO00462 879 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 PCDH17O14917 1159 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 SRCP12931 536 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 HOXB6P17509 224 aaKnown RBP12.19□□□□□ -0.46
SMG8-202ENST00000543872 HLA-DPA1P20036 260 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 POLR2GP62487 172 aaKnown RBP eCLIP12.19□□□□□ -0.46
SMG8-202ENST00000543872 ACVR1Q04771 509 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 GRM7Q14831 915 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 PTGES3Q15185 160 aaKnown RBP12.19□□□□□ -0.46
SMG8-202ENST00000543872 TRIM69Q86WT6 500 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 LINC01465Q8N7H1 131 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 CREB3L4Q8TEY5 395 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 SELENOMQ8WWX9 145 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 C1GALT1C1Q96EU7 318 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 C7orf34Q96L11 122 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 FAM105AQ9NUU6 356 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 RHCGQ9UBD6 479 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 SEC14L4Q9UDX3 406 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 AFF4Q9UHB7 1163 aaKnown RBP12.19□□□□□ -0.46
SMG8-202ENST00000543872 VPS9D1Q9Y2B5 631 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 LINC00862A6NCI5 91 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 ZNF670-ZNF695F2Z2N8 137 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 ENTPD6O75354 484 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 ACPPP15309 386 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 PTPN6P29350 595 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 KIR3DL1P43629 444 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 GANABQ14697 944 aaKnown RBP12.19□□□□□ -0.46
SMG8-202ENST00000543872 MLIPQ5VWP3 458 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 AFTPHQ6ULP2 937 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 PTOV1Q86YD1 416 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 BBS7Q8IWZ6 715 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 RAET1EQ8TD07 263 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 PIH1D2Q8WWB5 315 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 COPS8Q99627 209 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 POLR1EQ9GZS1 481 aaKnown RBP12.19□□□□□ -0.46
SMG8-202ENST00000543872 PARP14Q460N5 1801 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 PHIPQ8WWQ0 1821 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 J3KTA2 159 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 PAHP00439 452 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 SCG5P05408 212 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 ITGALP20701 1170 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 ARHGEF7Q14155 803 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 AANATQ16613 207 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 UGT8Q16880 541 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 MANEALQ5VSG8 457 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 PDZD3Q86UT5 571 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 ZBED3Q96IU2 234 aaPredicted RBP12.19□□□□□ -0.46
SMG8-202ENST00000543872 EPYCQ99645 322 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 CDCA4Q9BXL8 241 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 TMEM245Q9H330 911 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 RDH8Q9NYR8 311 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 STUB1Q9UNE7 303 aa12.19□□□□□ -0.46
SMG8-202ENST00000543872 NOSIPQ9Y314 301 aaKnown RBP12.19□□□□□ -0.46
SMG8-202ENST00000543872 DICER1Q9UPY3 1922 aaKnown RBP12.18□□□□□ -0.46
SMG8-202ENST00000543872 PRAMEF33A0A0G2JMD5 474 aa12.18□□□□□ -0.46
SMG8-202ENST00000543872 MEIS3P2A8K0S8 358 aa12.18□□□□□ -0.46
SMG8-202ENST00000543872 FAM25EA8MYX2 175 aa12.18□□□□□ -0.46
SMG8-202ENST00000543872 PRAMEF10O60809 474 aa12.18□□□□□ -0.46
SMG8-202ENST00000543872 AFF1P51825 1210 aaKnown RBP12.18□□□□□ -0.46
SMG8-202ENST00000543872 SMSP52788 366 aa12.18□□□□□ -0.46
SMG8-202ENST00000543872 CLDN8P56748 225 aa12.18□□□□□ -0.46
SMG8-202ENST00000543872 PCBP2Q15366 365 aaKnown RBP eCLIP12.18□□□□□ -0.46
SMG8-202ENST00000543872 CNIH2Q6PI25 160 aa12.18□□□□□ -0.46
SMG8-202ENST00000543872 CFAP77Q6ZQR2 320 aa12.18□□□□□ -0.46
SMG8-202ENST00000543872 ASB18Q6ZVZ8 466 aa12.18□□□□□ -0.46
SMG8-202ENST00000543872 CHMP1BQ7LBR1 199 aa12.18□□□□□ -0.46
SMG8-202ENST00000543872 RNF175Q8N4F7 328 aa12.18□□□□□ -0.46
SMG8-202ENST00000543872 NELL1Q92832 810 aa12.18□□□□□ -0.46
SMG8-202ENST00000543872 WDFY2Q96P53 400 aa12.18□□□□□ -0.46
SMG8-202ENST00000543872 IER2Q9BTL4 223 aa12.18□□□□□ -0.46
SMG8-202ENST00000543872 HDHD2Q9H0R4 259 aa12.18□□□□□ -0.46
SMG8-202ENST00000543872 MED28Q9H204 178 aa12.18□□□□□ -0.46
SMG8-202ENST00000543872 ANKRA2Q9H9E1 313 aa12.18□□□□□ -0.46
SMG8-202ENST00000543872 OSER1Q9NX31 292 aa12.18□□□□□ -0.46
SMG8-202ENST00000543872 TNFRSF10DQ9UBN6 386 aa12.18□□□□□ -0.46
SMG8-202ENST00000543872 POFUT2Q9Y2G5 429 aa12.18□□□□□ -0.46
SMG8-202ENST00000543872 MAGEB17A8MXT2 336 aa12.18□□□□□ -0.46
SMG8-202ENST00000543872 TAPBPO15533 448 aa12.18□□□□□ -0.46
SMG8-202ENST00000543872 CSO75390 466 aaKnown RBP12.18□□□□□ -0.46
SMG8-202ENST00000543872 APOL3O95236 402 aa12.18□□□□□ -0.46
SMG8-202ENST00000543872 ALDH1A1P00352 501 aa12.18□□□□□ -0.46
SMG8-202ENST00000543872 GABRB1P18505 474 aa12.18□□□□□ -0.46
SMG8-202ENST00000543872 CHMP24386 653 aa12.18□□□□□ -0.46
SMG8-202ENST00000543872 ATN1P54259 1190 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms