RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 FAM170BA6NMN3 283 aa18.7■□□□□ 0.58
SUDS3-204ENST00000543473 AP1G1O43747 822 aa18.7■□□□□ 0.58
SUDS3-204ENST00000543473 SCN2BO60939 215 aa18.7■□□□□ 0.58
SUDS3-204ENST00000543473 JUNP05412 331 aaKnown RBP18.7■□□□□ 0.58
SUDS3-204ENST00000543473 CCL5P13501 91 aa18.7■□□□□ 0.58
SUDS3-204ENST00000543473 EXOC3L2Q2M3D2 409 aa18.7■□□□□ 0.58
SUDS3-204ENST00000543473 LARP4Q71RC2 724 aaKnown RBP eCLIP18.7■□□□□ 0.58
SUDS3-204ENST00000543473 ZNF248Q8NDW4 579 aa18.7■□□□□ 0.58
SUDS3-204ENST00000543473 TBC1D15Q8TC07 691 aa18.7■□□□□ 0.58
SUDS3-204ENST00000543473 A0A0G2JN53 185 aa18.7■□□□□ 0.58
SUDS3-204ENST00000543473 RB1P06400 928 aa18.7■□□□□ 0.58
SUDS3-204ENST00000543473 C8AP07357 584 aa18.7■□□□□ 0.58
SUDS3-204ENST00000543473 TSPAN5P62079 268 aa18.7■□□□□ 0.58
SUDS3-204ENST00000543473 ADAM8P78325 824 aa18.7■□□□□ 0.58
SUDS3-204ENST00000543473 RNF130Q86XS8 419 aa18.7■□□□□ 0.58
SUDS3-204ENST00000543473 JPH3Q8WXH2 748 aaPredicted RBP18.7■□□□□ 0.58
SUDS3-204ENST00000543473 ACDQ96AP0 544 aa18.7■□□□□ 0.58
SUDS3-204ENST00000543473 ABCB8Q9NUT2 735 aa18.7■□□□□ 0.58
SUDS3-204ENST00000543473 SCML2Q9UQR0 700 aa18.7■□□□□ 0.58
SUDS3-204ENST00000543473 CCDC85CA6NKD9 419 aa18.7■□□□□ 0.58
SUDS3-204ENST00000543473 NCBP2P52298 156 aaKnown RBP eCLIP18.7■□□□□ 0.585e-8■□□□□ 9.1
SUDS3-204ENST00000543473 NFE2L1Q14494 772 aa18.7■□□□□ 0.58
SUDS3-204ENST00000543473 PRPF38BQ5VTL8 546 aaKnown RBP18.7■□□□□ 0.58
SUDS3-204ENST00000543473 MEDAGQ5VYS4 303 aa18.7■□□□□ 0.58
SUDS3-204ENST00000543473 C22orf42Q6IC83 251 aa18.7■□□□□ 0.58
SUDS3-204ENST00000543473 VTCN1Q7Z7D3 282 aa18.7■□□□□ 0.58
SUDS3-204ENST00000543473 GPN2Q9H9Y4 310 aaPredicted RBP18.7■□□□□ 0.58
SUDS3-204ENST00000543473 ANXA3P12429 323 aa18.69■□□□□ 0.58
SUDS3-204ENST00000543473 CRHBPP24387 322 aa18.69■□□□□ 0.58
SUDS3-204ENST00000543473 PROX2Q3B8N5 592 aa18.69■□□□□ 0.58
SUDS3-204ENST00000543473 ATAT1Q5SQI0 421 aa18.69■□□□□ 0.58
SUDS3-204ENST00000543473 REEP3Q6NUK4 255 aa18.69■□□□□ 0.58
SUDS3-204ENST00000543473 SLC30A6Q6NXT4 461 aa18.69■□□□□ 0.58
SUDS3-204ENST00000543473 UMODL1-AS1Q8N2C9 162 aa18.69■□□□□ 0.58
SUDS3-204ENST00000543473 CHST4Q8NCG5 386 aa18.69■□□□□ 0.58
SUDS3-204ENST00000543473 CCDC115Q96NT0 180 aa18.69■□□□□ 0.58
SUDS3-204ENST00000543473 GAL3ST1Q99999 423 aa18.69■□□□□ 0.58
SUDS3-204ENST00000543473 MAGED1Q9Y5V3 778 aaPredicted RBP18.69■□□□□ 0.58
SUDS3-204ENST00000543473 CAPN5O15484 640 aaPredicted RBP18.69■□□□□ 0.58
SUDS3-204ENST00000543473 ARL6IP5O75915 188 aa18.69■□□□□ 0.58
SUDS3-204ENST00000543473 ADH1CP00326 375 aa18.69■□□□□ 0.58
SUDS3-204ENST00000543473 NT5EP21589 574 aa18.69■□□□□ 0.58
SUDS3-204ENST00000543473 HTR6P50406 440 aa18.69■□□□□ 0.58
SUDS3-204ENST00000543473 TAS2R50P59544 299 aa18.69■□□□□ 0.58
SUDS3-204ENST00000543473 DSG2Q14126 1118 aa18.69■□□□□ 0.58
SUDS3-204ENST00000543473 GINS1Q14691 196 aa18.69■□□□□ 0.58
SUDS3-204ENST00000543473 GARNL3Q5VVW2 1013 aa18.69■□□□□ 0.58
SUDS3-204ENST00000543473 RANBP10Q6VN20 620 aa18.69■□□□□ 0.58
SUDS3-204ENST00000543473 PNPLA1Q8N8W4 532 aa18.69■□□□□ 0.58
SUDS3-204ENST00000543473 NEIL3Q8TAT5 605 aa18.69■□□□□ 0.58
SUDS3-204ENST00000543473 DPH2Q9BQC3 489 aaPredicted RBP18.69■□□□□ 0.58
SUDS3-204ENST00000543473 PCDH10Q9P2E7 1040 aa18.69■□□□□ 0.58
SUDS3-204ENST00000543473 MYH4Q9Y623 1939 aa18.69■□□□□ 0.58
SUDS3-204ENST00000543473 HAPLN1P10915 354 aaPredicted RBP18.69■□□□□ 0.58
SUDS3-204ENST00000543473 FOXA1P55317 472 aa18.69■□□□□ 0.58
SUDS3-204ENST00000543473 SPCS2Q15005 226 aa18.69■□□□□ 0.58
SUDS3-204ENST00000543473 DPY19L2P1Q6NXN4 242 aa18.69■□□□□ 0.58
SUDS3-204ENST00000543473 TICAM1Q8IUC6 712 aa18.69■□□□□ 0.58
SUDS3-204ENST00000543473 NATD1Q8N6N6 113 aa18.69■□□□□ 0.58
SUDS3-204ENST00000543473 RFT1Q96AA3 541 aa18.69■□□□□ 0.58
SUDS3-204ENST00000543473 NAV1Q8NEY1 1877 aa18.69■□□□□ 0.58
SUDS3-204ENST00000543473 A0A075B6Q4 140 aa18.69■□□□□ 0.58
SUDS3-204ENST00000543473 PRMT3O60678 531 aa18.69■□□□□ 0.58
SUDS3-204ENST00000543473 HK1P19367 917 aa18.69■□□□□ 0.58
SUDS3-204ENST00000543473 FOXB2Q5VYV0 432 aa18.69■□□□□ 0.58
SUDS3-204ENST00000543473 GALNT10Q86SR1 603 aa18.69■□□□□ 0.58
SUDS3-204ENST00000543473 DCP2Q8IU60 420 aaKnown RBP18.69■□□□□ 0.58
SUDS3-204ENST00000543473 C2orf15Q8WU43 125 aaKnown RBP18.69■□□□□ 0.58
SUDS3-204ENST00000543473 RNF31Q96EP0 1072 aa18.69■□□□□ 0.58
SUDS3-204ENST00000543473 NDC1Q9BTX1 674 aa18.69■□□□□ 0.58
SUDS3-204ENST00000543473 RANBP3Q9H6Z4 567 aaPredicted RBP18.69■□□□□ 0.58
SUDS3-204ENST00000543473 PCTPQ9UKL6 214 aa18.69■□□□□ 0.58
SUDS3-204ENST00000543473 OR6K6Q8NGW6 343 aa18.68■□□□□ 0.58
SUDS3-204ENST00000543473 SUV39H2Q9H5I1 410 aa18.68■□□□□ 0.58
SUDS3-204ENST00000543473 CLCA1A8K7I4 914 aa18.68■□□□□ 0.58
SUDS3-204ENST00000543473 F8A1P23610 371 aa18.68■□□□□ 0.58
SUDS3-204ENST00000543473 APLP1P51693 650 aa18.68■□□□□ 0.58
SUDS3-204ENST00000543473 SNRPD2P62316 118 aaKnown RBP18.68■□□□□ 0.58
SUDS3-204ENST00000543473 AGTRAPQ6RW13 159 aa18.68■□□□□ 0.58
SUDS3-204ENST00000543473 NUDT13Q86X67 352 aa18.68■□□□□ 0.58
SUDS3-204ENST00000543473 CHCHD4Q8N4Q1 142 aa18.68■□□□□ 0.58
SUDS3-204ENST00000543473 KREMEN2Q8NCW0 462 aa18.68■□□□□ 0.58
SUDS3-204ENST00000543473 OR10G6Q8NH81 332 aa18.68■□□□□ 0.58
SUDS3-204ENST00000543473 C1orf74Q96LT6 269 aa18.68■□□□□ 0.58
SUDS3-204ENST00000543473 ZNF354BQ96LW1 612 aa18.68■□□□□ 0.58
SUDS3-204ENST00000543473 EXOSC1Q9Y3B2 195 aaKnown RBP18.68■□□□□ 0.58
SUDS3-204ENST00000543473 PCDHGB1Q9Y5G3 927 aa18.68■□□□□ 0.58
SUDS3-204ENST00000543473 IGKV6D-21A0A0A0MT36 114 aa18.68■□□□□ 0.58
SUDS3-204ENST00000543473 SLC35F4A4IF30 521 aa18.68■□□□□ 0.58
SUDS3-204ENST00000543473 FGF19O95750 216 aa18.68■□□□□ 0.58
SUDS3-204ENST00000543473 PDYNP01213 254 aa18.68■□□□□ 0.58
SUDS3-204ENST00000543473 ARCN1P48444 511 aaKnown RBP18.68■□□□□ 0.58
SUDS3-204ENST00000543473 EMX1Q04741 257 aaPredicted RBP18.68■□□□□ 0.58
SUDS3-204ENST00000543473 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.68■□□□□ 0.58
SUDS3-204ENST00000543473 OR51B5Q9H339 312 aa18.68■□□□□ 0.58
SUDS3-204ENST00000543473 RC3H2Q9HBD1 1191 aaKnown RBP18.68■□□□□ 0.58
SUDS3-204ENST00000543473 AGAP5A6NIR3 686 aa18.68■□□□□ 0.58
SUDS3-204ENST00000543473 CNMDO75829 334 aa18.68■□□□□ 0.58
SUDS3-204ENST00000543473 APOL3O95236 402 aa18.68■□□□□ 0.58
SUDS3-204ENST00000543473 RETP07949 1114 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms