RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 ADAM11O75078 769 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 VPS26AO75436 327 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 ITGA10O75578 1167 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 PPM1BO75688 479 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 CRTAMO95727 393 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 IGHA1P01876 353 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 FTH1P02794 183 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 TUBB4AP04350 444 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 CCDC172P0C7W6 258 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 CPEP16870 476 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 IL1RNP18510 177 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 RAB6AP20340 208 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 FPR1P21462 350 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 ACRV1P26436 265 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 CMPK1P30085 196 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 CCNFP41002 786 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 TRPC1P48995 793 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 RAC1P63000 192 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 SNRPNP63162 240 aaKnown RBP4.43□□□□□ -1.7
LIMS1-214ENST00000542845 SUMO1P63165 101 aaKnown RBP4.43□□□□□ -1.7
LIMS1-214ENST00000542845 PTK6Q13882 451 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 VEZF1Q14119 521 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 SLC10A1Q14973 349 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 SETDB1Q15047 1291 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 PDK1Q15118 436 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 PDK2Q15119 407 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 NDUFA9Q16795 377 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 PRTGQ2VWP7 1150 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 ZNF658BQ4V348 819 aaPredicted RBP4.43□□□□□ -1.7
LIMS1-214ENST00000542845 TM4SF20Q53R12 229 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 LCE3BQ5TA77 95 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 PPP1R2P3Q6NXS1 205 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 RNF44Q7L0R7 432 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 PRSS41Q7RTY9 318 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 ADCK2Q7Z695 626 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 LUZP2Q86TE4 346 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 SLC22A16Q86VW1 577 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 RFX6Q8HWS3 928 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 PLD3Q8IV08 490 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 VRK3Q8IV63 474 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 WDR75Q8IWA0 830 aaKnown RBP4.43□□□□□ -1.7
LIMS1-214ENST00000542845 ELOA2Q8IYF1 753 aaPredicted RBP4.43□□□□□ -1.7
LIMS1-214ENST00000542845 PPM1NQ8N819 430 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 ZFP62Q8NB50 900 aaPredicted RBP4.43□□□□□ -1.7
LIMS1-214ENST00000542845 NAXEQ8NCW5 288 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 OR2M7Q8NG81 312 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 OR2L3Q8NG85 312 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 ELP5Q8TE02 316 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 EDARADDQ8WWZ3 215 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 TSLPQ969D9 159 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 SARAFQ96BY9 339 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 MVB12AQ96EY5 273 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 ZBED6CLQ96FA7 236 aaPredicted RBP4.43□□□□□ -1.7
LIMS1-214ENST00000542845 PEX11GQ96HA9 241 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 OXNAD1Q96HP4 312 aaPredicted RBP4.43□□□□□ -1.7
LIMS1-214ENST00000542845 TEKT5Q96M29 485 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 RNF157Q96PX1 679 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 MACROD1Q9BQ69 325 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 FICDQ9BVA6 458 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 TTTY12Q9BZ98 90 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 LIN28AQ9H9Z2 209 aaKnown RBP4.43□□□□□ -1.7
LIMS1-214ENST00000542845 MRPS30Q9NP92 439 aaKnown RBP4.43□□□□□ -1.7
LIMS1-214ENST00000542845 DEPPQ9NTK1 212 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 SPTLC3Q9NUV7 552 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 IP6K2Q9UHH9 426 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 PCDHA3Q9Y5H8 950 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 ARID1AO14497 2285 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 TLN2Q9Y4G6 2542 aa4.42□□□□□ -1.7
LIMS1-214ENST00000542845 TRGV5A0A0B4J1U4 118 aa4.42□□□□□ -1.7
LIMS1-214ENST00000542845 A0A0G2JMM0 328 aa4.42□□□□□ -1.7
LIMS1-214ENST00000542845 A0A1W2PPB8 328 aa4.42□□□□□ -1.7
LIMS1-214ENST00000542845 A0A1W2PRS3 328 aa4.42□□□□□ -1.7
LIMS1-214ENST00000542845 SLC5A10A0PJK1 596 aa4.42□□□□□ -1.7
LIMS1-214ENST00000542845 C5orf60A6NFR6 353 aa4.42□□□□□ -1.7
LIMS1-214ENST00000542845 A8MVJ9 347 aa4.42□□□□□ -1.7
LIMS1-214ENST00000542845 KIR3DP1A8MWS1 328 aa4.42□□□□□ -1.7
LIMS1-214ENST00000542845 MYO1FO00160 1098 aa4.42□□□□□ -1.7
LIMS1-214ENST00000542845 APOL1O14791 398 aa4.42□□□□□ -1.7
LIMS1-214ENST00000542845 P2RX6O15547 441 aa4.42□□□□□ -1.7
LIMS1-214ENST00000542845 TLX2O43763 284 aaPredicted RBP4.42□□□□□ -1.7
LIMS1-214ENST00000542845 CD5LO43866 347 aa4.42□□□□□ -1.7
LIMS1-214ENST00000542845 RDH16O75452 317 aa4.42□□□□□ -1.7
LIMS1-214ENST00000542845 EPOP01588 193 aa4.42□□□□□ -1.7
LIMS1-214ENST00000542845 RPN2P04844 631 aa4.42□□□□□ -1.7
LIMS1-214ENST00000542845 OR56A5P0C7T3 313 aa4.42□□□□□ -1.7
LIMS1-214ENST00000542845 FAM157CP0CG43 387 aa4.42□□□□□ -1.7
LIMS1-214ENST00000542845 SKILP12757 684 aa4.42□□□□□ -1.7
LIMS1-214ENST00000542845 TNNT1P13805 278 aa4.42□□□□□ -1.7
LIMS1-214ENST00000542845 GABRA1P14867 456 aa4.42□□□□□ -1.7
LIMS1-214ENST00000542845 CR1P17927 2039 aa4.42□□□□□ -1.7
LIMS1-214ENST00000542845 KDELR1P24390 212 aa4.42□□□□□ -1.7
LIMS1-214ENST00000542845 EEF1GP26641 437 aaKnown RBP4.42□□□□□ -1.7
LIMS1-214ENST00000542845 TRHRP34981 398 aaPredicted RBP4.42□□□□□ -1.7
LIMS1-214ENST00000542845 BDKRB1P46663 353 aa4.42□□□□□ -1.7
LIMS1-214ENST00000542845 CPA2P48052 419 aa4.42□□□□□ -1.7
LIMS1-214ENST00000542845 SSR4P51571 173 aa4.42□□□□□ -1.7
LIMS1-214ENST00000542845 ATP5J2P56134 94 aa4.42□□□□□ -1.7
LIMS1-214ENST00000542845 RNF4P78317 190 aa4.42□□□□□ -1.7
LIMS1-214ENST00000542845 UBXN1Q04323 297 aa4.42□□□□□ -1.7
LIMS1-214ENST00000542845 GRB7Q14451 532 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms