RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 FANCGO15287 622 aa14.67□□□□□ -0.06
VPS33A-206ENST00000542310 PRMT3O60678 531 aa14.67□□□□□ -0.06
VPS33A-206ENST00000542310 MLYCDO95822 493 aa14.67□□□□□ -0.06
VPS33A-206ENST00000542310 GSTA2P09210 222 aa14.67□□□□□ -0.06
VPS33A-206ENST00000542310 KCNK10P57789 538 aa14.67□□□□□ -0.06
VPS33A-206ENST00000542310 OLR1P78380 273 aa14.67□□□□□ -0.06
VPS33A-206ENST00000542310 RBPJQ06330 500 aa14.67□□□□□ -0.06
VPS33A-206ENST00000542310 TERF2Q15554 542 aa14.67□□□□□ -0.06
VPS33A-206ENST00000542310 TGFBIQ15582 683 aa14.67□□□□□ -0.06
VPS33A-206ENST00000542310 FCRLBQ6BAA4 426 aa14.67□□□□□ -0.06
VPS33A-206ENST00000542310 MTFR2Q6P444 385 aa14.67□□□□□ -0.06
VPS33A-206ENST00000542310 SLCO4C1Q6ZQN7 724 aa14.67□□□□□ -0.06
VPS33A-206ENST00000542310 MAATS1Q7Z4T9 603 aa14.67□□□□□ -0.06
VPS33A-206ENST00000542310 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.67□□□□□ -0.06
VPS33A-206ENST00000542310 TMEM178AQ8NBL3 297 aa14.67□□□□□ -0.06
VPS33A-206ENST00000542310 ARMC2Q8NEN0 867 aa14.67□□□□□ -0.06
VPS33A-206ENST00000542310 ADAMTS18Q8TE60 1221 aa14.67□□□□□ -0.06
VPS33A-206ENST00000542310 GPR22Q99680 433 aa14.67□□□□□ -0.06
VPS33A-206ENST00000542310 ERP44Q9BS26 406 aa14.67□□□□□ -0.06
VPS33A-206ENST00000542310 NPLQ9BXD5 320 aaPredicted RBP14.67□□□□□ -0.06
VPS33A-206ENST00000542310 CAPS2Q9BXY5 557 aa14.67□□□□□ -0.06
VPS33A-206ENST00000542310 NT5DC2Q9H857 520 aa14.67□□□□□ -0.06
VPS33A-206ENST00000542310 CNOT10Q9H9A5 744 aaKnown RBP14.67□□□□□ -0.06
VPS33A-206ENST00000542310 PRDM9Q9NQV7 894 aa14.67□□□□□ -0.06
VPS33A-206ENST00000542310 SMYD2Q9NRG4 433 aa14.67□□□□□ -0.06
VPS33A-206ENST00000542310 TXNDC16Q9P2K2 825 aa14.67□□□□□ -0.06
VPS33A-206ENST00000542310 SEC14L3Q9UDX4 400 aa14.67□□□□□ -0.06
VPS33A-206ENST00000542310 PYCARDQ9ULZ3 195 aa14.67□□□□□ -0.06
VPS33A-206ENST00000542310 CRYBG3Q68DQ2 2970 aa14.67□□□□□ -0.06
VPS33A-206ENST00000542310 MYO7BQ6PIF6 2116 aa14.66□□□□□ -0.06
VPS33A-206ENST00000542310 A0A088AWK7 358 aa14.66□□□□□ -0.06
VPS33A-206ENST00000542310 GABRR3A8MPY1 467 aa14.66□□□□□ -0.06
VPS33A-206ENST00000542310 C1GALT1C1LP0DN25 315 aa14.66□□□□□ -0.06
VPS33A-206ENST00000542310 CD46P15529 392 aa14.66□□□□□ -0.06
VPS33A-206ENST00000542310 ZNF10P21506 573 aaPredicted RBP14.66□□□□□ -0.06
VPS33A-206ENST00000542310 MST1P26927 711 aa14.66□□□□□ -0.06
VPS33A-206ENST00000542310 GGT5P36269 586 aa14.66□□□□□ -0.06
VPS33A-206ENST00000542310 GP5P40197 560 aa14.66□□□□□ -0.06
VPS33A-206ENST00000542310 ATP6V0D1P61421 351 aa14.66□□□□□ -0.06
VPS33A-206ENST00000542310 RBBP5Q15291 538 aaKnown RBP14.66□□□□□ -0.06
VPS33A-206ENST00000542310 OR1C1Q15619 314 aa14.66□□□□□ -0.06
VPS33A-206ENST00000542310 ZKSCAN8Q15776 578 aaPredicted RBP14.66□□□□□ -0.06
VPS33A-206ENST00000542310 TOR1AIP1Q5JTV8 583 aa14.66□□□□□ -0.06
VPS33A-206ENST00000542310 C1QL3Q5VWW1 255 aa14.66□□□□□ -0.06
VPS33A-206ENST00000542310 ZNF787Q6DD87 383 aa14.66□□□□□ -0.06
VPS33A-206ENST00000542310 TMIGD1Q6UXZ0 262 aa14.66□□□□□ -0.06
VPS33A-206ENST00000542310 FJX1Q86VR8 437 aa14.66□□□□□ -0.06
VPS33A-206ENST00000542310 KRT78Q8N1N4 520 aa14.66□□□□□ -0.06
VPS33A-206ENST00000542310 CA13Q8N1Q1 262 aa14.66□□□□□ -0.06
VPS33A-206ENST00000542310 ARMC10Q8N2F6 343 aa14.66□□□□□ -0.06
VPS33A-206ENST00000542310 AMER2Q8N7J2 671 aa14.66□□□□□ -0.06
VPS33A-206ENST00000542310 FAM98AQ8NCA5 519 aaKnown RBP14.66□□□□□ -0.06
VPS33A-206ENST00000542310 PTCHD1Q96NR3 888 aa14.66□□□□□ -0.06
VPS33A-206ENST00000542310 SIGLEC12Q96PQ1 595 aa14.66□□□□□ -0.06
VPS33A-206ENST00000542310 RBBP8Q99708 897 aa14.66□□□□□ -0.06
VPS33A-206ENST00000542310 SUCOQ9UBS9 1254 aaKnown RBP14.66□□□□□ -0.06
VPS33A-206ENST00000542310 NCOA6Q14686 2063 aaPredicted RBP14.65□□□□□ -0.06
VPS33A-206ENST00000542310 TCRBV9S1A1TA0A576 114 aa14.65□□□□□ -0.06
VPS33A-206ENST00000542310 CTAGE15A4D2H0 777 aa14.65□□□□□ -0.06
VPS33A-206ENST00000542310 FAM159BA6NKW6 160 aa14.65□□□□□ -0.06
VPS33A-206ENST00000542310 C4orf51C9J302 202 aa14.65□□□□□ -0.06
VPS33A-206ENST00000542310 ZG16O60844 167 aa14.65□□□□□ -0.06
VPS33A-206ENST00000542310 B4GALT2O60909 372 aa14.65□□□□□ -0.06
VPS33A-206ENST00000542310 H2AFYO75367 372 aaKnown RBP14.65□□□□□ -0.06
VPS33A-206ENST00000542310 CLEC3AO75596 197 aa14.65□□□□□ -0.06
VPS33A-206ENST00000542310 UNC5CO95185 931 aa14.65□□□□□ -0.06
VPS33A-206ENST00000542310 B3GALT4O96024 378 aa14.65□□□□□ -0.06
VPS33A-206ENST00000542310 EEF1DP29692 281 aaKnown RBP14.65□□□□□ -0.06
VPS33A-206ENST00000542310 CD96P40200 585 aa14.65□□□□□ -0.06
VPS33A-206ENST00000542310 CA7P43166 264 aa14.65□□□□□ -0.06
VPS33A-206ENST00000542310 RAB8AP61006 207 aa14.65□□□□□ -0.06
VPS33A-206ENST00000542310 SLBPQ14493 270 aaKnown RBP eCLIP14.65□□□□□ -0.06
VPS33A-206ENST00000542310 CTAGE6Q86UF2 777 aa14.65□□□□□ -0.06
VPS33A-206ENST00000542310 PDPRQ8NCN5 879 aa14.65□□□□□ -0.06
VPS33A-206ENST00000542310 SPATA4Q8NEY3 305 aa14.65□□□□□ -0.06
VPS33A-206ENST00000542310 THAP3Q8WTV1 239 aaPredicted RBP14.65□□□□□ -0.06
VPS33A-206ENST00000542310 TMEM79Q9BSE2 394 aa14.65□□□□□ -0.06
VPS33A-206ENST00000542310 AICDAQ9GZX7 198 aa14.65□□□□□ -0.06
VPS33A-206ENST00000542310 KLHL31Q9H511 634 aa14.65□□□□□ -0.06
VPS33A-206ENST00000542310 TRIM45Q9H8W5 580 aaPredicted RBP14.65□□□□□ -0.06
VPS33A-206ENST00000542310 SAYSD1Q9NPB0 183 aa14.65□□□□□ -0.06
VPS33A-206ENST00000542310 WWOXQ9NZC7 414 aa14.65□□□□□ -0.06
VPS33A-206ENST00000542310 ITPR2Q14571 2701 aa14.65□□□□□ -0.07
VPS33A-206ENST00000542310 RAD51CO43502 376 aa14.64□□□□□ -0.07
VPS33A-206ENST00000542310 DNAJB6O75190 326 aa14.64□□□□□ -0.07
VPS33A-206ENST00000542310 NEURL1O76050 574 aa14.64□□□□□ -0.07
VPS33A-206ENST00000542310 CD1DP15813 335 aa14.64□□□□□ -0.07
VPS33A-206ENST00000542310 STMN1P16949 149 aa14.64□□□□□ -0.07
VPS33A-206ENST00000542310 MAOAP21397 527 aa14.64□□□□□ -0.07
VPS33A-206ENST00000542310 COL8A1P27658 744 aa14.64□□□□□ -0.07
VPS33A-206ENST00000542310 SSTR1P30872 391 aa14.64□□□□□ -0.07
VPS33A-206ENST00000542310 HNF4AP41235 474 aa14.64□□□□□ -0.07
VPS33A-206ENST00000542310 PMP22Q01453 160 aa14.64□□□□□ -0.07
VPS33A-206ENST00000542310 CAV1Q03135 178 aa14.64□□□□□ -0.07
VPS33A-206ENST00000542310 ADPRMQ3LIE5 342 aa14.64□□□□□ -0.07
VPS33A-206ENST00000542310 SULT1C3Q6IMI6 304 aa14.64□□□□□ -0.07
VPS33A-206ENST00000542310 RPTNQ6XPR3 784 aa14.64□□□□□ -0.07
VPS33A-206ENST00000542310 CAPN12Q6ZSI9 719 aa14.64□□□□□ -0.07
VPS33A-206ENST00000542310 RPS19BP1Q86WX3 136 aaKnown RBP14.64□□□□□ -0.07
VPS33A-206ENST00000542310 GPSM1Q86YR5 675 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms