RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 RPL15P61313 204 aaKnown RBP5.24□□□□□ -1.57
CPSF7-220ENST00000541963 LAMB3Q13751 1172 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 ITGA9Q13797 1035 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 IHHQ14623 411 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 SLC1A5Q15758 541 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 CLPPQ16740 277 aaPredicted RBP5.24□□□□□ -1.57
CPSF7-220ENST00000541963 C14orf28Q4W4Y0 310 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 PYCR3Q53H96 274 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 SIRPB2Q5JXA9 342 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 HENMT1Q5T8I9 393 aaKnown RBP5.24□□□□□ -1.57
CPSF7-220ENST00000541963 GUSBP11Q6P575 273 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 TMEM88Q6PEY1 159 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 TMEM65Q6PI78 240 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 DOK6Q6PKX4 331 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 KDELC1Q6UW63 502 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 KDM7AQ6ZMT4 941 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 RBM44Q6ZP01 1051 aaKnown RBP5.24□□□□□ -1.57
CPSF7-220ENST00000541963 RFLNAQ6ZTI6 216 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 GLT6D1Q7Z4J2 308 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.24□□□□□ -1.57
CPSF7-220ENST00000541963 SLC35F3Q8IY50 421 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 OR4N4Q8N0Y3 316 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 TRIM58Q8NG06 486 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 GDAP1Q8TB36 358 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 BLOC1S5Q8TDH9 187 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 SH3KBP1Q96B97 665 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 PDXPQ96GD0 296 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 COX14Q96I36 57 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 SPATA13Q96N96 652 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 OR2M4Q96R27 311 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 C19orf43Q9BQ61 176 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 CCDC3Q9BQI4 270 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 THAP7Q9BT49 309 aaPredicted RBP5.24□□□□□ -1.57
CPSF7-220ENST00000541963 DUSP26Q9BV47 211 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 STRADBQ9C0K7 418 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 CARD9Q9H257 536 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 LRRN3Q9H3W5 708 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 CDCP1Q9H5V8 836 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 SUDS3Q9H7L9 328 aaPredicted RBP5.24□□□□□ -1.57
CPSF7-220ENST00000541963 SYNDIG1Q9H7V2 258 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 FGF22Q9HCT0 170 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 LZTFL1Q9NQ48 299 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 HOMER3Q9NSC5 361 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 FOXJ2Q9P0K8 574 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 AKAP7Q9P0M2 348 aaPredicted RBP5.24□□□□□ -1.57
CPSF7-220ENST00000541963 TAAR2Q9P1P5 351 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 NFKBIL1Q9UBC1 381 aaPredicted RBP5.24□□□□□ -1.57
CPSF7-220ENST00000541963 TRIM10Q9UDY6 481 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 APPL1Q9UKG1 709 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 PACSIN3Q9UKS6 424 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 PACSIN2Q9UNF0 486 aaPredicted RBP5.24□□□□□ -1.57
CPSF7-220ENST00000541963 CRYL1Q9Y2S2 319 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 TMEM98Q9Y2Y6 226 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 PTPRBP23467 1997 aa5.24□□□□□ -1.57
CPSF7-220ENST00000541963 KNL1Q8NG31 2342 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 LY6G6EA0A0G2JKS1 128 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 GLYATL1P3A0A0U1RQE8 302 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 A0A0U1RQS6 177 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 ERI2A8K979 691 aaKnown RBP5.23□□□□□ -1.57
CPSF7-220ENST00000541963 B4DGG1 531 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 AP3B1O00203 1094 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 KMOO15229 486 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 RRP8O43159 456 aaKnown RBP5.23□□□□□ -1.57
CPSF7-220ENST00000541963 CSO75390 466 aaKnown RBP5.23□□□□□ -1.57
CPSF7-220ENST00000541963 JTBO76095 146 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 CDK14O94921 469 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 SOD1P00441 154 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 AGTP01019 485 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 POLBP06746 335 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 HNRNPCP07910 306 aaKnown RBP eCLIP5.23□□□□□ -1.57
CPSF7-220ENST00000541963 PIRTP0C851 137 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 RALBP11234 206 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 DRD4P21917 467 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 FPR3P25089 353 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 PCSK6P29122 969 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 RBMS1P29558 406 aaKnown RBP5.23□□□□□ -1.57
CPSF7-220ENST00000541963 FDFT1P37268 417 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 HADHAP40939 763 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 CLCNKAP51800 687 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 VAMP2P63027 116 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 HOXA4Q00056 320 aaPredicted RBP5.23□□□□□ -1.57
CPSF7-220ENST00000541963 TMEM115Q12893 351 aaPredicted RBP5.23□□□□□ -1.57
CPSF7-220ENST00000541963 EIF3IQ13347 325 aaKnown RBP5.23□□□□□ -1.57
CPSF7-220ENST00000541963 TUBB2AQ13885 445 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 TAF1AQ15573 450 aaPredicted RBP5.23□□□□□ -1.57
CPSF7-220ENST00000541963 CCNG2Q16589 344 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 ISXQ2M1V0 245 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 GLE1Q53GS7 698 aaKnown RBP5.23□□□□□ -1.57
CPSF7-220ENST00000541963 LDLRAP1Q5SW96 308 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 ALS2CLQ60I27 953 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 AADACL2Q6P093 401 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 SLC30A9Q6PML9 568 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 C4orf22Q6V702 233 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 RANBP10Q6VN20 620 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 MARK2Q7KZI7 788 aaKnown RBP5.23□□□□□ -1.57
CPSF7-220ENST00000541963 LINC00523Q86TU6 105 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 SLC9B2Q86UD5 537 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 SLC13A5Q86YT5 568 aaPredicted RBP5.23□□□□□ -1.57
CPSF7-220ENST00000541963 PELI3Q8N2H9 469 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 ARL14Q8N4G2 192 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms