RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 LRRC56Q8IYG6 542 aaPredicted RBP9.15□□□□□ -0.94
CNOT4-212ENST00000541284 LMNTD1Q8N9Z9 388 aa9.15□□□□□ -0.94
CNOT4-212ENST00000541284 OR10G2Q8NGC3 310 aa9.15□□□□□ -0.94
CNOT4-212ENST00000541284 OR9Q2Q8NGE9 314 aa9.15□□□□□ -0.94
CNOT4-212ENST00000541284 ELMO1Q92556 727 aa9.15□□□□□ -0.94
CNOT4-212ENST00000541284 WDR34Q96EX3 536 aa9.15□□□□□ -0.94
CNOT4-212ENST00000541284 ASIC4Q96FT7 647 aa9.15□□□□□ -0.94
CNOT4-212ENST00000541284 ABHD8Q96I13 439 aa9.15□□□□□ -0.94
CNOT4-212ENST00000541284 TAPBPLQ9BX59 468 aa9.15□□□□□ -0.94
CNOT4-212ENST00000541284 ZBP1Q9H171 429 aa9.15□□□□□ -0.94
CNOT4-212ENST00000541284 SPNS1Q9H2V7 528 aa9.15□□□□□ -0.94
CNOT4-212ENST00000541284 ACER3Q9NUN7 267 aa9.15□□□□□ -0.94
CNOT4-212ENST00000541284 CCDC59Q9P031 241 aaKnown RBP9.15□□□□□ -0.94
CNOT4-212ENST00000541284 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.15□□□□□ -0.94
CNOT4-212ENST00000541284 DSPPQ9NZW4 1301 aa9.15□□□□□ -0.94
CNOT4-212ENST00000541284 PRAMEF33A0A0G2JMD5 474 aa9.15□□□□□ -0.95
CNOT4-212ENST00000541284 HTR3EA5X5Y0 456 aa9.15□□□□□ -0.95
CNOT4-212ENST00000541284 TAF4O00268 1085 aa9.15□□□□□ -0.95
CNOT4-212ENST00000541284 LEFTY2O00292 366 aa9.15□□□□□ -0.95
CNOT4-212ENST00000541284 TNFRSF11BO00300 401 aa9.15□□□□□ -0.95
CNOT4-212ENST00000541284 TSPAN6O43657 245 aa9.15□□□□□ -0.95
CNOT4-212ENST00000541284 PRAMEF10O60809 474 aa9.15□□□□□ -0.95
CNOT4-212ENST00000541284 AP2A2O94973 939 aa9.15□□□□□ -0.95
CNOT4-212ENST00000541284 CTSLP07711 333 aa9.15□□□□□ -0.95
CNOT4-212ENST00000541284 ANXA4P09525 319 aaPredicted RBP9.15□□□□□ -0.95
CNOT4-212ENST00000541284 GJA1P17302 382 aa9.15□□□□□ -0.95
CNOT4-212ENST00000541284 ETV3P41162 512 aa9.15□□□□□ -0.95
CNOT4-212ENST00000541284 TUBA1BP68363 451 aa9.15□□□□□ -0.95
CNOT4-212ENST00000541284 ACSM2AQ08AH3 577 aa9.15□□□□□ -0.95
CNOT4-212ENST00000541284 ELP6Q0PNE2 266 aa9.15□□□□□ -0.95
CNOT4-212ENST00000541284 NAE1Q13564 534 aa9.15□□□□□ -0.95
CNOT4-212ENST00000541284 DDX39BQ13838 428 aaKnown RBP9.15□□□□□ -0.95
CNOT4-212ENST00000541284 MAPK11Q15759 364 aa9.15□□□□□ -0.95
CNOT4-212ENST00000541284 TIGD6Q17RP2 521 aa9.15□□□□□ -0.95
CNOT4-212ENST00000541284 ACSM2BQ68CK6 577 aa9.15□□□□□ -0.95
CNOT4-212ENST00000541284 Q6ZVL8 140 aa9.15□□□□□ -0.95
CNOT4-212ENST00000541284 TUBA1AQ71U36 451 aa9.15□□□□□ -0.95
CNOT4-212ENST00000541284 WDR53Q7Z5U6 358 aaPredicted RBP9.15□□□□□ -0.95
CNOT4-212ENST00000541284 TECPR1Q7Z6L1 1165 aa9.15□□□□□ -0.95
CNOT4-212ENST00000541284 ADIPOR2Q86V24 386 aa9.15□□□□□ -0.95
CNOT4-212ENST00000541284 ARMC8Q8IUR7 673 aa9.15□□□□□ -0.95
CNOT4-212ENST00000541284 NLGN4XQ8N0W4 816 aa9.15□□□□□ -0.95
CNOT4-212ENST00000541284 OR4K1Q8NGD4 311 aa9.15□□□□□ -0.95
CNOT4-212ENST00000541284 ZNF675Q8TD23 568 aa9.15□□□□□ -0.95
CNOT4-212ENST00000541284 CHAC2Q8WUX2 184 aa9.15□□□□□ -0.95
CNOT4-212ENST00000541284 SKA2Q8WVK7 121 aaPredicted RBP9.15□□□□□ -0.95
CNOT4-212ENST00000541284 NEIL2Q969S2 332 aa9.15□□□□□ -0.95
CNOT4-212ENST00000541284 CIDECQ96AQ7 238 aaPredicted RBP9.15□□□□□ -0.95
CNOT4-212ENST00000541284 ACSL6Q9UKU0 697 aa9.15□□□□□ -0.95
CNOT4-212ENST00000541284 IRAK3Q9Y616 596 aa9.15□□□□□ -0.95
CNOT4-212ENST00000541284 EYSQ5T1H1 3165 aa9.15□□□□□ -0.95
CNOT4-212ENST00000541284 OR2AG2A6NM03 316 aa9.14□□□□□ -0.95
CNOT4-212ENST00000541284 PRRG1O14668 218 aa9.14□□□□□ -0.95
CNOT4-212ENST00000541284 PCDH17O14917 1159 aa9.14□□□□□ -0.95
CNOT4-212ENST00000541284 GABRR2P28476 465 aa9.14□□□□□ -0.95
CNOT4-212ENST00000541284 PDHA2P29803 388 aa9.14□□□□□ -0.95
CNOT4-212ENST00000541284 HNF4AP41235 474 aa9.14□□□□□ -0.95
CNOT4-212ENST00000541284 CCR2P41597 374 aa9.14□□□□□ -0.95
CNOT4-212ENST00000541284 VASPP50552 380 aaPredicted RBP9.14□□□□□ -0.95
CNOT4-212ENST00000541284 EPHB3P54753 998 aa9.14□□□□□ -0.95
CNOT4-212ENST00000541284 RPS13P62277 151 aaKnown RBP9.14□□□□□ -0.95
CNOT4-212ENST00000541284 MC1RQ01726 317 aa9.14□□□□□ -0.95
CNOT4-212ENST00000541284 CYP27C1Q4G0S4 372 aa9.14□□□□□ -0.95
CNOT4-212ENST00000541284 ZDHHC20Q5W0Z9 365 aa9.14□□□□□ -0.95
CNOT4-212ENST00000541284 KIAA1841Q6NSI8 718 aa9.14□□□□□ -0.95
CNOT4-212ENST00000541284 HPS1Q92902 700 aa9.14□□□□□ -0.95
CNOT4-212ENST00000541284 TXNDC15Q96J42 360 aa9.14□□□□□ -0.95
CNOT4-212ENST00000541284 CCM2Q9BSQ5 444 aa9.14□□□□□ -0.95
CNOT4-212ENST00000541284 CEP44Q9C0F1 390 aa9.14□□□□□ -0.95
CNOT4-212ENST00000541284 TMEM38AQ9H6F2 299 aa9.14□□□□□ -0.95
CNOT4-212ENST00000541284 SGK2Q9HBY8 427 aa9.14□□□□□ -0.95
CNOT4-212ENST00000541284 CPNE5Q9HCH3 593 aa9.14□□□□□ -0.95
CNOT4-212ENST00000541284 SPASTQ9UBP0 616 aa9.14□□□□□ -0.95
CNOT4-212ENST00000541284 RAPGEFL1Q9UHV5 662 aa9.14□□□□□ -0.95
CNOT4-212ENST00000541284 FFAR1O14842 300 aa9.14□□□□□ -0.95
CNOT4-212ENST00000541284 TEX28O15482 410 aa9.14□□□□□ -0.95
CNOT4-212ENST00000541284 SPINT1O43278 529 aa9.14□□□□□ -0.95
CNOT4-212ENST00000541284 LILRB5O75023 590 aa9.14□□□□□ -0.95
CNOT4-212ENST00000541284 TBX6O95947 436 aaPredicted RBP9.14□□□□□ -0.95
CNOT4-212ENST00000541284 FURINP09958 794 aa9.14□□□□□ -0.95
CNOT4-212ENST00000541284 KCNJ8Q15842 424 aa9.14□□□□□ -0.95
CNOT4-212ENST00000541284 SSX1Q16384 188 aa9.14□□□□□ -0.95
CNOT4-212ENST00000541284 TAF12Q16514 161 aa9.14□□□□□ -0.95
CNOT4-212ENST00000541284 TUBA3EQ6PEY2 450 aa9.14□□□□□ -0.95
CNOT4-212ENST00000541284 VN1R5Q7Z5H4 357 aa9.14□□□□□ -0.95
CNOT4-212ENST00000541284 TMEM25Q86YD3 366 aa9.14□□□□□ -0.95
CNOT4-212ENST00000541284 LAS2Q8IYD9 372 aa9.14□□□□□ -0.95
CNOT4-212ENST00000541284 PARP16Q8N5Y8 322 aa9.14□□□□□ -0.95
CNOT4-212ENST00000541284 C11orf65Q8NCR3 313 aa9.14□□□□□ -0.95
CNOT4-212ENST00000541284 PSMA8Q8TAA3 256 aa9.14□□□□□ -0.95
CNOT4-212ENST00000541284 WDR48Q8TAF3 677 aa9.14□□□□□ -0.95
CNOT4-212ENST00000541284 TRIM43Q96BQ3 446 aaPredicted RBP9.14□□□□□ -0.95
CNOT4-212ENST00000541284 MRGPRX3Q96LB0 322 aa9.14□□□□□ -0.95
CNOT4-212ENST00000541284 OR5M11Q96RB7 305 aa9.14□□□□□ -0.95
CNOT4-212ENST00000541284 SLC46A2Q9BY10 475 aa9.14□□□□□ -0.95
CNOT4-212ENST00000541284 BHLHE41Q9C0J9 482 aaPredicted RBP9.14□□□□□ -0.95
CNOT4-212ENST00000541284 MRPL17Q9NRX2 175 aaKnown RBP9.14□□□□□ -0.95
CNOT4-212ENST00000541284 CAB39Q9Y376 341 aaPredicted RBP9.14□□□□□ -0.95
CNOT4-212ENST00000541284 ISPDA4D126 451 aa9.14□□□□□ -0.95
CNOT4-212ENST00000541284 MOSPD3O75425 235 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms