RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 BRF2Q9HAW0 419 aa17.81■□□□□ 0.44
VPS33A-205ENST00000541169 KCNK9Q9NPC2 374 aa17.81■□□□□ 0.44
VPS33A-205ENST00000541169 NAALAD2Q9Y3Q0 740 aa17.81■□□□□ 0.44
VPS33A-205ENST00000541169 FRYQ5TBA9 3013 aa17.81■□□□□ 0.44
VPS33A-205ENST00000541169 ANKRD11Q6UB99 2663 aaPredicted RBP17.81■□□□□ 0.44
VPS33A-205ENST00000541169 WDFY3Q8IZQ1 3526 aa17.8■□□□□ 0.44
VPS33A-205ENST00000541169 SYNDIG1LA6NDD5 238 aa17.8■□□□□ 0.44
VPS33A-205ENST00000541169 VSTM2BA6NLU5 285 aa17.8■□□□□ 0.44
VPS33A-205ENST00000541169 KLHL18O94889 574 aa17.8■□□□□ 0.44
VPS33A-205ENST00000541169 BPGMP07738 259 aa17.8■□□□□ 0.44
VPS33A-205ENST00000541169 ZNF888P0CJ79 500 aaPredicted RBP17.8■□□□□ 0.44
VPS33A-205ENST00000541169 ALDH3A1P30838 453 aa17.8■□□□□ 0.44
VPS33A-205ENST00000541169 OR1D4P47884 311 aa17.8■□□□□ 0.44
VPS33A-205ENST00000541169 DEPDC1Q5TB30 811 aa17.8■□□□□ 0.44
VPS33A-205ENST00000541169 KHDRBS2Q5VWX1 349 aaKnown RBP17.8■□□□□ 0.44
VPS33A-205ENST00000541169 MED25Q71SY5 747 aa17.8■□□□□ 0.44
VPS33A-205ENST00000541169 RAB43Q86YS6 212 aa17.8■□□□□ 0.44
VPS33A-205ENST00000541169 AMER3Q8N944 861 aa17.8■□□□□ 0.44
VPS33A-205ENST00000541169 OR9A4Q8NGU2 314 aa17.8■□□□□ 0.44
VPS33A-205ENST00000541169 ZCCHC10Q8TBK6 192 aa17.8■□□□□ 0.44
VPS33A-205ENST00000541169 MIEF2Q96C03 454 aa17.8■□□□□ 0.44
VPS33A-205ENST00000541169 SERINC2Q96SA4 455 aa17.8■□□□□ 0.44
VPS33A-205ENST00000541169 AKIRIN1Q9H9L7 192 aaPredicted RBP17.8■□□□□ 0.44
VPS33A-205ENST00000541169 COPS7BQ9H9Q2 264 aaPredicted RBP17.8■□□□□ 0.44
VPS33A-205ENST00000541169 DMRT3Q9NQL9 472 aa17.8■□□□□ 0.44
VPS33A-205ENST00000541169 NKIRAS1Q9NYS0 192 aa17.8■□□□□ 0.44
VPS33A-205ENST00000541169 AHSPQ9NZD4 102 aa17.8■□□□□ 0.44
VPS33A-205ENST00000541169 TRPC4Q9UBN4 977 aa17.8■□□□□ 0.44
VPS33A-205ENST00000541169 AGPSO00116 658 aa17.79■□□□□ 0.44
VPS33A-205ENST00000541169 ERI3O43414 337 aaKnown RBP17.79■□□□□ 0.44
VPS33A-205ENST00000541169 ULK1O75385 1050 aa17.79■□□□□ 0.44
VPS33A-205ENST00000541169 KLF7O75840 302 aaPredicted RBP17.79■□□□□ 0.44
VPS33A-205ENST00000541169 SEMA3DO95025 777 aa17.79■□□□□ 0.44
VPS33A-205ENST00000541169 MED26O95402 600 aa17.79■□□□□ 0.44
VPS33A-205ENST00000541169 CREB1P16220 341 aa17.79■□□□□ 0.44
VPS33A-205ENST00000541169 IL1RNP18510 177 aa17.79■□□□□ 0.44
VPS33A-205ENST00000541169 JAK1P23458 1154 aa17.79■□□□□ 0.44
VPS33A-205ENST00000541169 GRK2P25098 689 aa17.79■□□□□ 0.44
VPS33A-205ENST00000541169 ITPKBP27987 946 aa17.79■□□□□ 0.44
VPS33A-205ENST00000541169 HMOX2P30519 316 aa17.79■□□□□ 0.44
VPS33A-205ENST00000541169 SERPINB4P48594 390 aa17.79■□□□□ 0.44
VPS33A-205ENST00000541169 MTTPP55157 894 aa17.79■□□□□ 0.44
VPS33A-205ENST00000541169 MAGOHP61326 146 aaKnown RBP17.79■□□□□ 0.44
VPS33A-205ENST00000541169 NKG7Q16617 165 aa17.79■□□□□ 0.44
VPS33A-205ENST00000541169 UGT8Q16880 541 aa17.79■□□□□ 0.44
VPS33A-205ENST00000541169 AP5B1Q2VPB7 878 aa17.79■□□□□ 0.44
VPS33A-205ENST00000541169 DEFB134Q4QY38 66 aa17.79■□□□□ 0.44
VPS33A-205ENST00000541169 LCN10Q6JVE6 187 aa17.79■□□□□ 0.44
VPS33A-205ENST00000541169 LETMD1Q6P1Q0 360 aa17.79■□□□□ 0.44
VPS33A-205ENST00000541169 VN1R5Q7Z5H4 357 aa17.79■□□□□ 0.44
VPS33A-205ENST00000541169 NUDCD3Q8IVD9 361 aa17.79■□□□□ 0.44
VPS33A-205ENST00000541169 GBP7Q8N8V2 638 aaPredicted RBP17.79■□□□□ 0.44
VPS33A-205ENST00000541169 METTL6Q8TCB7 284 aa17.79■□□□□ 0.44
VPS33A-205ENST00000541169 RGMAQ96B86 450 aa17.79■□□□□ 0.44
VPS33A-205ENST00000541169 ATP6V1G3Q96LB4 118 aa17.79■□□□□ 0.44
VPS33A-205ENST00000541169 CDK15Q96Q40 435 aa17.79■□□□□ 0.44
VPS33A-205ENST00000541169 MACROD1Q9BQ69 325 aa17.79■□□□□ 0.44
VPS33A-205ENST00000541169 MID1IP1Q9NPA3 183 aa17.79■□□□□ 0.44
VPS33A-205ENST00000541169 SEMA3GQ9NS98 782 aa17.79■□□□□ 0.44
VPS33A-205ENST00000541169 SLC22A11Q9NSA0 550 aa17.79■□□□□ 0.44
VPS33A-205ENST00000541169 IL17BQ9UHF5 180 aa17.79■□□□□ 0.44
VPS33A-205ENST00000541169 MAU2Q9Y6X3 613 aa17.79■□□□□ 0.44
VPS33A-205ENST00000541169 BLACEA4D250 179 aa17.78■□□□□ 0.44
VPS33A-205ENST00000541169 HMGB1P1B2RPK0 211 aaPredicted RBP17.78■□□□□ 0.44
VPS33A-205ENST00000541169 B3GALT2O43825 422 aa17.78■□□□□ 0.44
VPS33A-205ENST00000541169 ITGB2P05107 769 aa17.78■□□□□ 0.44
VPS33A-205ENST00000541169 ZGLP1P0C6A0 271 aa17.78■□□□□ 0.44
VPS33A-205ENST00000541169 DHRS4L1P0CG22 281 aa17.78■□□□□ 0.44
VPS33A-205ENST00000541169 F8A1P23610 371 aa17.78■□□□□ 0.44
VPS33A-205ENST00000541169 HNRNPH1P31943 449 aaKnown RBP17.78■□□□□ 0.44
VPS33A-205ENST00000541169 RAP1GDS1P52306 607 aa17.78■□□□□ 0.44
VPS33A-205ENST00000541169 ABHD17CQ6PCB6 329 aa17.78■□□□□ 0.44
VPS33A-205ENST00000541169 COX15Q7KZN9 410 aa17.78■□□□□ 0.44
VPS33A-205ENST00000541169 PPP1R14CQ8TAE6 165 aa17.78■□□□□ 0.44
VPS33A-205ENST00000541169 STT3BQ8TCJ2 826 aa17.78■□□□□ 0.44
VPS33A-205ENST00000541169 AGAP11Q8TF27 550 aa17.78■□□□□ 0.44
VPS33A-205ENST00000541169 MTERF1Q99551 399 aaKnown RBP17.78■□□□□ 0.44
VPS33A-205ENST00000541169 SH3GL2Q99962 352 aa17.78■□□□□ 0.44
VPS33A-205ENST00000541169 YIPF2Q9BWQ6 316 aa17.78■□□□□ 0.44
VPS33A-205ENST00000541169 C12orf65Q9H3J6 166 aaKnown RBP17.78■□□□□ 0.44
VPS33A-205ENST00000541169 MS4A12Q9NXJ0 267 aa17.78■□□□□ 0.44
VPS33A-205ENST00000541169 MRPS2Q9Y399 296 aaKnown RBP17.78■□□□□ 0.44
VPS33A-205ENST00000541169 PTRH2Q9Y3E5 179 aaKnown RBP17.78■□□□□ 0.44
VPS33A-205ENST00000541169 SPACA6W5XKT8 324 aa17.78■□□□□ 0.44
VPS33A-205ENST00000541169 FER1L5A0AVI2 2057 aa17.77■□□□□ 0.44
VPS33A-205ENST00000541169 UQCRHLA0A096LP55 91 aa17.77■□□□□ 0.44
VPS33A-205ENST00000541169 SERTM1A2A2V5 107 aa17.77■□□□□ 0.44
VPS33A-205ENST00000541169 MAGEB17A8MXT2 336 aa17.77■□□□□ 0.44
VPS33A-205ENST00000541169 CRCPO75575 148 aa17.77■□□□□ 0.44
VPS33A-205ENST00000541169 OR4F21O95013 312 aa17.77■□□□□ 0.44
VPS33A-205ENST00000541169 CHEK2O96017 543 aa17.77■□□□□ 0.44
VPS33A-205ENST00000541169 TGFB1P01137 390 aa17.77■□□□□ 0.44
VPS33A-205ENST00000541169 STATHP02808 62 aa17.77■□□□□ 0.44
VPS33A-205ENST00000541169 UQCRHP07919 91 aa17.77■□□□□ 0.44
VPS33A-205ENST00000541169 RNH1P13489 461 aaKnown RBP17.77■□□□□ 0.44
VPS33A-205ENST00000541169 RAB8AP61006 207 aa17.77■□□□□ 0.44
VPS33A-205ENST00000541169 BTN3A2P78410 334 aa17.77■□□□□ 0.44
VPS33A-205ENST00000541169 CDC20Q12834 499 aa17.77■□□□□ 0.44
VPS33A-205ENST00000541169 CSTF3Q12996 717 aaKnown RBP17.77■□□□□ 0.44
VPS33A-205ENST00000541169 DDX39BQ13838 428 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms