RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 NDUFA9Q16795 377 aa9.17□□□□□ -0.94
TTC39C-203ENST00000540918 PERM1Q5SV97 790 aa9.17□□□□□ -0.94
TTC39C-203ENST00000540918 CDC73Q6P1J9 531 aa9.17□□□□□ -0.94
TTC39C-203ENST00000540918 FIGNL1Q6PIW4 674 aa9.17□□□□□ -0.94
TTC39C-203ENST00000540918 TTLL10Q6ZVT0 673 aa9.17□□□□□ -0.94
TTC39C-203ENST00000540918 CNTN4Q8IWV2 1026 aa9.17□□□□□ -0.94
TTC39C-203ENST00000540918 MRPL38Q96DV4 380 aaKnown RBP9.17□□□□□ -0.94
TTC39C-203ENST00000540918 CAMK1GQ96NX5 476 aa9.17□□□□□ -0.94
TTC39C-203ENST00000540918 LGR4Q9BXB1 951 aa9.17□□□□□ -0.94
TTC39C-203ENST00000540918 KRCC1Q9NPI7 259 aaPredicted RBP9.17□□□□□ -0.94
TTC39C-203ENST00000540918 AASSQ9UDR5 926 aa9.17□□□□□ -0.94
TTC39C-203ENST00000540918 MKLN1Q9UL63 735 aa9.17□□□□□ -0.94
TTC39C-203ENST00000540918 PSMD11O00231 422 aa9.17□□□□□ -0.94
TTC39C-203ENST00000540918 CACNG3O60359 315 aa9.17□□□□□ -0.94
TTC39C-203ENST00000540918 PRKRAO75569 313 aaKnown RBP9.17□□□□□ -0.94
TTC39C-203ENST00000540918 BCAS2O75934 225 aaPredicted RBP9.17□□□□□ -0.94
TTC39C-203ENST00000540918 SNAP29O95721 258 aa9.17□□□□□ -0.94
TTC39C-203ENST00000540918 DLGAP3O95886 979 aa9.17□□□□□ -0.94
TTC39C-203ENST00000540918 HIST1H2ABP04908 130 aa9.17□□□□□ -0.94
TTC39C-203ENST00000540918 TIA1P31483 386 aaKnown RBP eCLIP9.17□□□□□ -0.94
TTC39C-203ENST00000540918 GUCA1AP43080 201 aaPredicted RBP9.17□□□□□ -0.94
TTC39C-203ENST00000540918 RPL5P46777 297 aaKnown RBP9.17□□□□□ -0.94
TTC39C-203ENST00000540918 MESP2Q0VG99 397 aa9.17□□□□□ -0.94
TTC39C-203ENST00000540918 SUZ12Q15022 739 aaKnown RBP9.17□□□□□ -0.94
TTC39C-203ENST00000540918 ZNF77Q15935 545 aa9.17□□□□□ -0.94
TTC39C-203ENST00000540918 HIST3H2AQ7L7L0 130 aa9.17□□□□□ -0.94
TTC39C-203ENST00000540918 OLIG3Q7RTU3 272 aa9.17□□□□□ -0.94
TTC39C-203ENST00000540918 RASGRP3Q8IV61 690 aa9.17□□□□□ -0.94
TTC39C-203ENST00000540918 KLHDC8AQ8IYD2 350 aa9.17□□□□□ -0.94
TTC39C-203ENST00000540918 CYP4Z2PQ8N1L4 340 aa9.17□□□□□ -0.94
TTC39C-203ENST00000540918 FAM98AQ8NCA5 519 aaKnown RBP9.17□□□□□ -0.94
TTC39C-203ENST00000540918 TRPV3Q8NET8 790 aa9.17□□□□□ -0.94
TTC39C-203ENST00000540918 OR52L1Q8NGH7 329 aa9.17□□□□□ -0.94
TTC39C-203ENST00000540918 GIPC3Q8TF64 312 aa9.17□□□□□ -0.94
TTC39C-203ENST00000540918 ATOH1Q92858 354 aaPredicted RBP9.17□□□□□ -0.94
TTC39C-203ENST00000540918 HIST1H2ACQ93077 130 aa9.17□□□□□ -0.94
TTC39C-203ENST00000540918 SLC25A36Q96CQ1 311 aa9.17□□□□□ -0.94
TTC39C-203ENST00000540918 SHDQ96IW2 340 aa9.17□□□□□ -0.94
TTC39C-203ENST00000540918 TMEM121BQ9BXQ6 578 aaPredicted RBP9.17□□□□□ -0.94
TTC39C-203ENST00000540918 CPEB1Q9BZB8 566 aaKnown RBP9.17□□□□□ -0.94
TTC39C-203ENST00000540918 FOXQ1Q9C009 403 aa9.17□□□□□ -0.94
TTC39C-203ENST00000540918 MAPRE3Q9UPY8 281 aa9.17□□□□□ -0.94
TTC39C-203ENST00000540918 PCDHB14Q9Y5E9 798 aa9.17□□□□□ -0.94
TTC39C-203ENST00000540918 COMMD3-BMI1R4GMX3 469 aa9.17□□□□□ -0.94
TTC39C-203ENST00000540918 ZNFX1Q9P2E3 1918 aaKnown RBP9.17□□□□□ -0.94
TTC39C-203ENST00000540918 SNTNA6NMZ2 147 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 SLC25A12O75746 678 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 WFS1O76024 890 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 PDE9AO76083 593 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 IGLV3-27P01718 113 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 RAB28P51157 221 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 LARS2Q15031 903 aaKnown RBP9.16□□□□□ -0.94
TTC39C-203ENST00000540918 TYSND1Q2T9J0 566 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 SLC35F1Q5T1Q4 408 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 BROXQ5VW32 411 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 KANK2Q63ZY3 851 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 PTCRAQ6ISU1 281 aaPredicted RBP9.16□□□□□ -0.94
TTC39C-203ENST00000540918 NEK5Q6P3R8 708 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 DPPA4Q7L190 304 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 GPR149Q86SP6 731 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 CCL4L1Q8NHW4 92 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 TEX47Q8TBZ9 253 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 TADA1Q96BN2 335 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 L3HYPDHQ96EM0 354 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 PEX11GQ96HA9 241 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 TEX37Q96LM6 180 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 GAL3ST1Q99999 423 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 C1QTNF1Q9BXJ1 281 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 REEP4Q9H6H4 257 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 PDFQ9HBH1 243 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 CLN6Q9NWW5 311 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 HEBP2Q9Y5Z4 205 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 ALPK2Q86TB3 2170 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 E2F3O00716 465 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 PEX11BO96011 259 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 HNRNPA2B1P22626 353 aaKnown RBP9.16□□□□□ -0.94
TTC39C-203ENST00000540918 ERICH5Q6P6B1 374 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 TMEM150AQ86TG1 271 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 RETREG3Q86VR2 466 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 LGI4Q8N135 537 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 OR52E1Q8NGJ3 308 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 OR2T11Q8NH01 316 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 ASB11Q8WXH4 323 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 ISG20Q96AZ6 181 aaKnown RBP9.16□□□□□ -0.94
TTC39C-203ENST00000540918 PTCHD1Q96NR3 888 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 NECTIN4Q96NY8 510 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 NRTNQ99748 197 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 EXO5Q9H790 373 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 FANCEQ9HB96 536 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 CMTM6Q9NX76 183 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 EURLQ9NYK6 297 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 ACTR3BQ9P1U1 418 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 GPR34Q9UPC5 381 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 UNC13CQ8NB66 2214 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 CAPN5O15484 640 aaPredicted RBP9.16□□□□□ -0.94
TTC39C-203ENST00000540918 CTSLP07711 333 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 RPS17P08708 135 aaKnown RBP9.16□□□□□ -0.94
TTC39C-203ENST00000540918 SDC1P18827 310 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 CR2P20023 1033 aa9.16□□□□□ -0.94
TTC39C-203ENST00000540918 CERS1P27544 350 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms