RNA–Protein interactions for RNA: ENST00000540447.5

YBX3-208, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 6,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-208ENST00000540447 HSDL1Q3SXM5 330 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 MON1BQ7L1V2 547 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 OR4D10Q8NGI6 311 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 SLC35B4Q969S0 331 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 EBPLQ9BY08 206 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 NARFLQ9H6Q4 476 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 BPIFA1Q9NP55 256 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 GPR83Q9NYM4 423 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 CRB1P82279 1406 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 GXYLT2A0PJZ3 443 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 B4GAT1O43505 415 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 HRGP04196 525 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 NMBRP28336 390 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 MEOX2P50222 304 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 RAP2BP61225 183 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 RAB30Q15771 203 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 ALG11Q2TAA5 492 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 SLC35F1Q5T1Q4 408 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 NOTUMQ6P988 496 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 GTF2H5Q6ZYL4 71 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 CACUL1Q86Y37 369 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 ADAMTS19Q8TE59 1207 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 GTF3C2Q8WUA4 911 aaPredicted RBP8.48□□□□□ -1.05
YBX3-208ENST00000540447 CELF1Q92879 486 aaKnown RBP8.48□□□□□ -1.05
YBX3-208ENST00000540447 ELP4Q96EB1 424 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 MICU1Q9BPX6 476 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 BTBD2Q9BX70 525 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 SUCNR1Q9BXA5 334 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 SPHK1Q9NYA1 384 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.48□□□□□ -1.05
YBX3-208ENST00000540447 DENND4BO75064 1496 aaPredicted RBP8.48□□□□□ -1.05
YBX3-208ENST00000540447 TCRBV7S3A2A0A539 114 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 OR6C75A6NL08 312 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 CD9P21926 228 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 RARRES1P49788 294 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 SOX10P56693 466 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 NPRL3Q12980 569 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 CDK5R2Q13319 367 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 TUSC3Q13454 348 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 GPR157Q5UAW9 335 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 TIFABQ6ZNK6 161 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 DNAAF1Q8NEP3 725 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 RAB3CQ96E17 227 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 KREMEN1Q96MU8 473 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 TXN2Q99757 166 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 THAP7Q9BT49 309 aaPredicted RBP8.48□□□□□ -1.05
YBX3-208ENST00000540447 METTL17Q9H7H0 456 aaPredicted RBP8.48□□□□□ -1.05
YBX3-208ENST00000540447 IMPA2O14732 288 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 LRRTM2O43300 516 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 C1QBP02746 253 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 OPN1SWP03999 348 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 CSF1RP07333 972 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 BDKRB2P30411 391 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 TAS2R39P59534 338 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 DPY19L1Q2PZI1 675 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 GDPGP1Q6ZNW5 385 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 TSPYL5Q86VY4 417 aaPredicted RBP8.48□□□□□ -1.05
YBX3-208ENST00000540447 RELL1Q8IUW5 271 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 OR6K6Q8NGW6 343 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 LILRB1Q8NHL6 650 aaPredicted RBP8.48□□□□□ -1.05
YBX3-208ENST00000540447 SLC6A7Q99884 636 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 HOXD1Q9GZZ0 328 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 OPA3Q9H6K4 179 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 FZD4Q9ULV1 537 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 MMP20O60882 483 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 DFFBO76075 338 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 SIX6O95475 246 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 IFNA5P01569 189 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 TLX1P31314 330 aaPredicted RBP8.48□□□□□ -1.05
YBX3-208ENST00000540447 HSPA7P48741 367 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 NR0B1P51843 470 aaKnown RBP8.48□□□□□ -1.05
YBX3-208ENST00000540447 WNT3AP56704 352 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 FAM209AQ5JX71 171 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 NOL9Q5SY16 702 aaKnown RBP8.48□□□□□ -1.05
YBX3-208ENST00000540447 PRSS42Q7Z5A4 293 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 CEACAM19Q7Z692 300 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 ZNF34Q8IZ26 560 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 SLC7A6Q92536 515 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 FBXO32Q969P5 355 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 PKP4Q99569 1192 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 KLK14Q9P0G3 267 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 TRPM1Q7Z4N2 1603 aa8.48□□□□□ -1.05
YBX3-208ENST00000540447 TCAPO15273 167 aa8.47□□□□□ -1.05
YBX3-208ENST00000540447 AP1G1O43747 822 aa8.47□□□□□ -1.05
YBX3-208ENST00000540447 DLX3O60479 287 aa8.47□□□□□ -1.05
YBX3-208ENST00000540447 SULT1C4O75897 302 aa8.47□□□□□ -1.05
YBX3-208ENST00000540447 NFYAP23511 347 aaPredicted RBP8.47□□□□□ -1.05
YBX3-208ENST00000540447 RPL10P27635 214 aaKnown RBP8.47□□□□□ -1.05
YBX3-208ENST00000540447 PCP4P48539 62 aa8.47□□□□□ -1.05
YBX3-208ENST00000540447 SLC36A3Q495N2 470 aa8.47□□□□□ -1.05
YBX3-208ENST00000540447 VARS2Q5ST30 1063 aaKnown RBP8.47□□□□□ -1.05
YBX3-208ENST00000540447 ARMC12Q5T9G4 340 aa8.47□□□□□ -1.05
YBX3-208ENST00000540447 LYPLAL1Q5VWZ2 237 aa8.47□□□□□ -1.05
YBX3-208ENST00000540447 OR10K2Q6IF99 312 aa8.47□□□□□ -1.05
YBX3-208ENST00000540447 NT5DC4Q86YG4 428 aa8.47□□□□□ -1.05
YBX3-208ENST00000540447 RASGRP3Q8IV61 690 aa8.47□□□□□ -1.05
YBX3-208ENST00000540447 NANOGQ9H9S0 305 aa8.47□□□□□ -1.05
YBX3-208ENST00000540447 PLEKHA1Q9HB21 404 aa8.47□□□□□ -1.05
YBX3-208ENST00000540447 KLHL9Q9P2J3 617 aa8.47□□□□□ -1.05
YBX3-208ENST00000540447 MED31Q9Y3C7 131 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms