RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 CRELD1Q96HD1 420 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 ZNF382Q96SR6 550 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 SPSB2Q99619 263 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 C17orf62Q9BQA9 187 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 EFHD1Q9BUP0 239 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 MECRQ9BV79 373 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 MS4A8Q9BY19 250 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 GPR87Q9BY21 358 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 KLHL31Q9H511 634 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 ACTL8Q9H568 366 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 WDR54Q9H977 334 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 VIPAS39Q9H9C1 493 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 CPNE5Q9HCH3 593 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 ZNF304Q9HCX3 659 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 DMRT3Q9NQL9 472 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 IFT80Q9P2H3 777 aaPredicted RBP6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 GMPR2Q9P2T1 348 aaKnown RBP6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 TRPS1Q9UHF7 1281 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 KCND3Q9UK17 655 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 TCFL5Q9UL49 500 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 STK38LQ9Y2H1 464 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 NAALAD2Q9Y3Q0 740 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 PCDHGA11Q9Y5H2 935 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 MAU2Q9Y6X3 613 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 URB1O60287 2271 aaKnown RBP6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 SCN2AQ99250 2005 aa6.62□□□□□ -1.35
LPCAT3-209ENST00000540060 UQCRHLA0A096LP55 91 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 LRIT2A6NDA9 550 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 URADA6NGE7 173 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 ZNF860A6NHJ4 632 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 H0YIG0 161 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 K7ENP7 123 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 UBFD1O14562 309 aaKnown RBP6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 FFAR3O14843 346 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 GPR42O15529 346 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 ERI3O43414 337 aaKnown RBP6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 GALR3O60755 368 aaPredicted RBP6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 RDH16O75452 317 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 CREG1O75629 220 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 SASH3O75995 380 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 KLHL18O94889 574 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 OR4F21O95013 312 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 ZWINTO95229 277 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 MLYCDO95822 493 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 B3GALT4O96024 378 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 ALBP02768 609 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 UQCRHP07919 91 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 DHRS4L1P0CG22 281 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 SMIM10L1P0DMW3 83 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 PIM1P11309 404 aaPredicted RBP6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 PCNAP12004 261 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 ALOX12P18054 663 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 PTPN4P29074 926 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 ALDH3A1P30838 453 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 HPDP32754 393 aaPredicted RBP6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 ARL1P40616 181 aaPredicted RBP6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 PIK3CBP42338 1070 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 CCR10P46092 362 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 AVPR1BP47901 424 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 NAGLUP54802 743 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 PKNOX1P55347 436 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 FOXL2P58012 376 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 RAB8AP61006 207 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 NAA20P61599 178 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 STXBP1P61764 594 aaKnown RBP6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 RPS15P62841 145 aaKnown RBP6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 MAT1AQ00266 395 aaKnown RBP6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 CDC20Q12834 499 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 IL10RAQ13651 578 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 DDX39BQ13838 428 aaKnown RBP6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 MPP2Q14168 576 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 ZRSR2Q15696 482 aaKnown RBP6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 NKG7Q16617 165 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 SYT16Q17RD7 645 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 DEFB134Q4QY38 66 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 CRTC2Q53ET0 693 aaPredicted RBP6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 C10orf62Q5T681 223 aaPredicted RBP6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 AGBL2Q5U5Z8 902 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 FAM69BQ5VUD6 431 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 NIPAL1Q6NVV3 410 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 INO80CQ6PI98 192 aaPredicted RBP6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 CCDC81Q6ZN84 652 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 GPRIN3Q6ZVF9 776 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 OVCH1Q7RTY7 1134 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 HDXQ7Z353 690 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 MILR1Q7Z6M3 343 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 SYVN1Q86TM6 617 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 TMEM151BQ8IW70 566 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 SHISA5Q8N114 240 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 CCNYL1Q8N7R7 359 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 OR2L5Q8NG80 312 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 OR2Y1Q8NGV0 311 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 HUS1BQ8NHY5 278 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 CCT6BQ92526 530 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 ATP6V1E2Q96A05 226 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 COL26A1Q96A83 441 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 REPS1Q96D71 796 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 MMABQ96EY8 250 aaPredicted RBP6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 CMTM7Q96FZ5 175 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 SMIM10Q96HG1 83 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms