RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 C19orf25Q9UFG5 118 aaPredicted RBP15.77■□□□□ 0.12
DDB1-215ENST00000539712 PTBP2Q9UKA9 531 aaKnown RBP15.77■□□□□ 0.12
DDB1-215ENST00000539712 ZNF490Q9ULM2 529 aaPredicted RBP15.77■□□□□ 0.12
DDB1-215ENST00000539712 ASB1Q9Y576 335 aa15.77■□□□□ 0.12
DDB1-215ENST00000539712 IGKV3D-11A0A0A0MRZ8 115 aa15.76■□□□□ 0.11
DDB1-215ENST00000539712 TRAV17A0A0B4J275 112 aa15.76■□□□□ 0.11
DDB1-215ENST00000539712 HMX2A2RU54 273 aa15.76■□□□□ 0.11
DDB1-215ENST00000539712 B4GALT2O60909 372 aa15.76■□□□□ 0.11
DDB1-215ENST00000539712 LDLRP01130 860 aa15.76■□□□□ 0.11
DDB1-215ENST00000539712 SLC35E2BP0CK96 405 aa15.76■□□□□ 0.11
DDB1-215ENST00000539712 CD22P20273 847 aa15.76■□□□□ 0.11
DDB1-215ENST00000539712 HNRNPH1P31943 449 aaKnown RBP15.76■□□□□ 0.11
DDB1-215ENST00000539712 ATP6V0D1P61421 351 aa15.76■□□□□ 0.11
DDB1-215ENST00000539712 AP2B1P63010 937 aa15.76■□□□□ 0.11
DDB1-215ENST00000539712 EFTUD2Q15029 972 aaKnown RBP eCLIP15.76■□□□□ 0.111e-6■■■■□ 22.1
DDB1-215ENST00000539712 UBAP2Q5T6F2 1119 aaKnown RBP15.76■□□□□ 0.11
DDB1-215ENST00000539712 GRTP1Q5TC63 336 aa15.76■□□□□ 0.11
DDB1-215ENST00000539712 FCRLBQ6BAA4 426 aa15.76■□□□□ 0.11
DDB1-215ENST00000539712 HIST2H2BCQ6DN03 193 aa15.76■□□□□ 0.11
DDB1-215ENST00000539712 ADNP2Q6IQ32 1131 aa15.76■□□□□ 0.11
DDB1-215ENST00000539712 PAPD4Q6PIY7 484 aaKnown RBP15.76■□□□□ 0.11
DDB1-215ENST00000539712 TMIGD1Q6UXZ0 262 aa15.76■□□□□ 0.11
DDB1-215ENST00000539712 CMC1Q7Z7K0 106 aa15.76■□□□□ 0.11
DDB1-215ENST00000539712 ISCA2Q86U28 154 aa15.76■□□□□ 0.11
DDB1-215ENST00000539712 CCDC25Q86WR0 208 aa15.76■□□□□ 0.11
DDB1-215ENST00000539712 CTAGE3PQ8IX95 158 aa15.76■□□□□ 0.11
DDB1-215ENST00000539712 PPM1NQ8N819 430 aa15.76■□□□□ 0.11
DDB1-215ENST00000539712 PDPRQ8NCN5 879 aa15.76■□□□□ 0.11
DDB1-215ENST00000539712 M1APQ8TC57 530 aa15.76■□□□□ 0.11
DDB1-215ENST00000539712 KIAA1191Q96A73 305 aa15.76■□□□□ 0.11
DDB1-215ENST00000539712 LRRC1Q9BTT6 524 aa15.76■□□□□ 0.11
DDB1-215ENST00000539712 NT5DC2Q9H857 520 aa15.76■□□□□ 0.11
DDB1-215ENST00000539712 CLK4Q9HAZ1 481 aaKnown RBP15.76■□□□□ 0.11
DDB1-215ENST00000539712 MMP25Q9NPA2 562 aa15.76■□□□□ 0.11
DDB1-215ENST00000539712 TXNDC16Q9P2K2 825 aa15.76■□□□□ 0.11
DDB1-215ENST00000539712 NOTCH2Q04721 2471 aa15.76■□□□□ 0.11
DDB1-215ENST00000539712 LRIT2A6NDA9 550 aa15.75■□□□□ 0.11
DDB1-215ENST00000539712 OR5H15A6NDH6 313 aa15.75■□□□□ 0.11
DDB1-215ENST00000539712 A8MUI8 341 aa15.75■□□□□ 0.11
DDB1-215ENST00000539712 EDN3P14138 238 aa15.75■□□□□ 0.11
DDB1-215ENST00000539712 SPRP35270 261 aaPredicted RBP15.75■□□□□ 0.11
DDB1-215ENST00000539712 HSPA7P48741 367 aa15.75■□□□□ 0.11
DDB1-215ENST00000539712 TDGF1P3P51864 188 aa15.75■□□□□ 0.11
DDB1-215ENST00000539712 ZNF33BQ06732 778 aa15.75■□□□□ 0.11
DDB1-215ENST00000539712 SLBPQ14493 270 aaKnown RBP eCLIP15.75■□□□□ 0.11
DDB1-215ENST00000539712 TOR1AIP1Q5JTV8 583 aa15.75■□□□□ 0.11
DDB1-215ENST00000539712 ACER2Q5QJU3 275 aa15.75■□□□□ 0.11
DDB1-215ENST00000539712 ABHD17BQ5VST6 288 aa15.75■□□□□ 0.11
DDB1-215ENST00000539712 SULT1C3Q6IMI6 304 aa15.75■□□□□ 0.11
DDB1-215ENST00000539712 NIPAL1Q6NVV3 410 aa15.75■□□□□ 0.11
DDB1-215ENST00000539712 CA13Q8N1Q1 262 aa15.75■□□□□ 0.11
DDB1-215ENST00000539712 MS4A6EQ96DS6 147 aa15.75■□□□□ 0.11
DDB1-215ENST00000539712 WDR34Q96EX3 536 aa15.75■□□□□ 0.11
DDB1-215ENST00000539712 EHD1Q9H4M9 534 aa15.75■□□□□ 0.11
DDB1-215ENST00000539712 IGSF5Q9NSI5 407 aa15.75■□□□□ 0.11
DDB1-215ENST00000539712 GPRC5BQ9NZH0 403 aa15.75■□□□□ 0.11
DDB1-215ENST00000539712 CLDN16Q9Y5I7 305 aa15.75■□□□□ 0.11
DDB1-215ENST00000539712 H2AFYO75367 372 aaKnown RBP15.74■□□□□ 0.11
DDB1-215ENST00000539712 STK16O75716 305 aa15.74■□□□□ 0.11
DDB1-215ENST00000539712 WISP2O76076 250 aa15.74■□□□□ 0.11
DDB1-215ENST00000539712 MAOAP21397 527 aa15.74■□□□□ 0.11
DDB1-215ENST00000539712 ST13P50502 369 aaKnown RBP15.74■□□□□ 0.11
DDB1-215ENST00000539712 OR4D2P58180 307 aa15.74■□□□□ 0.11
DDB1-215ENST00000539712 SLC26A5P58743 744 aa15.74■□□□□ 0.11
DDB1-215ENST00000539712 SKP1P63208 163 aa15.74■□□□□ 0.11
DDB1-215ENST00000539712 RUNX2Q13950 521 aa15.74■□□□□ 0.11
DDB1-215ENST00000539712 E2F2Q14209 437 aa15.74■□□□□ 0.11
DDB1-215ENST00000539712 EXT1Q16394 746 aa15.74■□□□□ 0.11
DDB1-215ENST00000539712 ADPRMQ3LIE5 342 aa15.74■□□□□ 0.11
DDB1-215ENST00000539712 QSOX2Q6ZRP7 698 aa15.74■□□□□ 0.11
DDB1-215ENST00000539712 CRLF3Q8IUI8 442 aa15.74■□□□□ 0.11
DDB1-215ENST00000539712 BEST3Q8N1M1 668 aa15.74■□□□□ 0.11
DDB1-215ENST00000539712 TCAIMQ8N3R3 496 aa15.74■□□□□ 0.11
DDB1-215ENST00000539712 NFAM1Q8NET5 270 aaPredicted RBP15.74■□□□□ 0.11
DDB1-215ENST00000539712 ELP5Q8TE02 316 aa15.74■□□□□ 0.11
DDB1-215ENST00000539712 PTCHD1Q96NR3 888 aa15.74■□□□□ 0.11
DDB1-215ENST00000539712 QRFPRQ96P65 431 aa15.74■□□□□ 0.11
DDB1-215ENST00000539712 ATOH8Q96SQ7 321 aa15.74■□□□□ 0.11
DDB1-215ENST00000539712 LPAR4Q99677 370 aa15.74■□□□□ 0.11
DDB1-215ENST00000539712 NECTIN3Q9NQS3 549 aa15.74■□□□□ 0.11
DDB1-215ENST00000539712 DNAJC11Q9NVH1 559 aa15.74■□□□□ 0.11
DDB1-215ENST00000539712 WWOXQ9NZC7 414 aa15.74■□□□□ 0.11
DDB1-215ENST00000539712 PLEKHB1Q9UF11 243 aaPredicted RBP15.74■□□□□ 0.11
DDB1-215ENST00000539712 DIDO1Q9BTC0 2240 aaKnown RBP15.74■□□□□ 0.11
DDB1-215ENST00000539712 TCRBV16S1A1N1A0A5B0 115 aa15.73■□□□□ 0.11
DDB1-215ENST00000539712 URADA6NGE7 173 aa15.73■□□□□ 0.11
DDB1-215ENST00000539712 PRMT3O60678 531 aa15.73■□□□□ 0.11
DDB1-215ENST00000539712 PRAMEF2O60811 474 aa15.73■□□□□ 0.11
DDB1-215ENST00000539712 CLEC3AO75596 197 aa15.73■□□□□ 0.11
DDB1-215ENST00000539712 DDAH2O95865 285 aa15.73■□□□□ 0.11
DDB1-215ENST00000539712 RNH1P13489 461 aaKnown RBP15.73■□□□□ 0.11
DDB1-215ENST00000539712 JAK1P23458 1154 aa15.73■□□□□ 0.11
DDB1-215ENST00000539712 STX2P32856 288 aa15.73■□□□□ 0.11
DDB1-215ENST00000539712 BTN3A2P78410 334 aa15.73■□□□□ 0.11
DDB1-215ENST00000539712 SRSF11Q05519 484 aaKnown RBP15.73■□□□□ 0.11
DDB1-215ENST00000539712 ACTN3Q08043 901 aaPredicted RBP15.73■□□□□ 0.11
DDB1-215ENST00000539712 DOC2AQ14183 400 aa15.73■□□□□ 0.11
DDB1-215ENST00000539712 FAM180AQ6UWF9 173 aa15.73■□□□□ 0.11
DDB1-215ENST00000539712 KIF2BQ8N4N8 673 aa15.73■□□□□ 0.11
DDB1-215ENST00000539712 BCORP1Q8N888 145 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms