RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 RHEBL1Q8TAI7 183 aa10.89□□□□□ -0.67
RTN3-209ENST00000538995 M1APQ8TC57 530 aa10.89□□□□□ -0.67
RTN3-209ENST00000538995 ADAMTS18Q8TE60 1221 aa10.89□□□□□ -0.67
RTN3-209ENST00000538995 UBTD2Q8WUN7 234 aa10.89□□□□□ -0.67
RTN3-209ENST00000538995 HAS2Q92819 552 aa10.89□□□□□ -0.67
RTN3-209ENST00000538995 PTCD3Q96EY7 689 aaKnown RBP10.89□□□□□ -0.67
RTN3-209ENST00000538995 CNDP1Q96KN2 507 aa10.89□□□□□ -0.67
RTN3-209ENST00000538995 ATOH8Q96SQ7 321 aa10.89□□□□□ -0.67
RTN3-209ENST00000538995 FMO2Q99518 471 aa10.89□□□□□ -0.67
RTN3-209ENST00000538995 ALG9Q9H6U8 611 aa10.89□□□□□ -0.67
RTN3-209ENST00000538995 ASF1BQ9NVP2 202 aa10.89□□□□□ -0.67
RTN3-209ENST00000538995 PTGFRNQ9P2B2 879 aa10.89□□□□□ -0.67
RTN3-209ENST00000538995 MAP10Q9P2G4 905 aa10.89□□□□□ -0.67
RTN3-209ENST00000538995 ACOT9Q9Y305 439 aa10.89□□□□□ -0.67
RTN3-209ENST00000538995 CSAG2Q9Y5P2 127 aa10.89□□□□□ -0.67
RTN3-209ENST00000538995 SHANK1Q9Y566 2161 aa10.89□□□□□ -0.67
RTN3-209ENST00000538995 TRAV17A0A0B4J275 112 aa10.88□□□□□ -0.67
RTN3-209ENST00000538995 SYNDIG1LA6NDD5 238 aa10.88□□□□□ -0.67
RTN3-209ENST00000538995 SYCE1LA8MT33 242 aa10.88□□□□□ -0.67
RTN3-209ENST00000538995 PSMD12O00232 456 aaPredicted RBP10.88□□□□□ -0.67
RTN3-209ENST00000538995 SEC24DO94855 1032 aaPredicted RBP10.88□□□□□ -0.67
RTN3-209ENST00000538995 CELA2AP08217 269 aa10.88□□□□□ -0.67
RTN3-209ENST00000538995 GLRBP48167 497 aa10.88□□□□□ -0.67
RTN3-209ENST00000538995 HSPA7P48741 367 aa10.88□□□□□ -0.67
RTN3-209ENST00000538995 SERPINB8P50452 374 aa10.88□□□□□ -0.67
RTN3-209ENST00000538995 TNFSF10P50591 281 aa10.88□□□□□ -0.67
RTN3-209ENST00000538995 SRSF1Q07955 248 aaKnown RBP eCLIP10.88□□□□□ -0.672e-7■■□□□ 13.4
RTN3-209ENST00000538995 PCDH1Q08174 1060 aa10.88□□□□□ -0.67
RTN3-209ENST00000538995 LAPTM5Q13571 262 aa10.88□□□□□ -0.67
RTN3-209ENST00000538995 TBCCQ15814 346 aa10.88□□□□□ -0.67
RTN3-209ENST00000538995 FAM83EQ2M2I3 478 aa10.88□□□□□ -0.67
RTN3-209ENST00000538995 BTBD16Q32M84 506 aa10.88□□□□□ -0.67
RTN3-209ENST00000538995 ADPRMQ3LIE5 342 aa10.88□□□□□ -0.67
RTN3-209ENST00000538995 SFT2D3Q587I9 215 aa10.88□□□□□ -0.67
RTN3-209ENST00000538995 TOR1AIP1Q5JTV8 583 aa10.88□□□□□ -0.67
RTN3-209ENST00000538995 FHL5Q5TD97 284 aa10.88□□□□□ -0.67
RTN3-209ENST00000538995 ABHD17BQ5VST6 288 aa10.88□□□□□ -0.67
RTN3-209ENST00000538995 PAPD4Q6PIY7 484 aaKnown RBP10.88□□□□□ -0.67
RTN3-209ENST00000538995 SIRT6Q8N6T7 355 aa10.88□□□□□ -0.67
RTN3-209ENST00000538995 SNX31Q8N9S9 440 aa10.88□□□□□ -0.67
RTN3-209ENST00000538995 NOA1Q8NC60 698 aaKnown RBP10.88□□□□□ -0.67
RTN3-209ENST00000538995 ZNF592Q92610 1267 aa10.88□□□□□ -0.67
RTN3-209ENST00000538995 DOCK10Q96BY6 2186 aa10.88□□□□□ -0.67
RTN3-209ENST00000538995 C19orf60Q96EN9 201 aa10.88□□□□□ -0.67
RTN3-209ENST00000538995 FAR2Q96K12 515 aa10.88□□□□□ -0.67
RTN3-209ENST00000538995 LPAR4Q99677 370 aa10.88□□□□□ -0.67
RTN3-209ENST00000538995 NPLQ9BXD5 320 aaPredicted RBP10.88□□□□□ -0.67
RTN3-209ENST00000538995 RBCK1Q9BYM8 510 aa10.88□□□□□ -0.67
RTN3-209ENST00000538995 CD244Q9BZW8 370 aa10.88□□□□□ -0.67
RTN3-209ENST00000538995 MMP25Q9NPA2 562 aa10.88□□□□□ -0.67
RTN3-209ENST00000538995 IGSF5Q9NSI5 407 aa10.88□□□□□ -0.67
RTN3-209ENST00000538995 NINJ2Q9NZG7 142 aa10.88□□□□□ -0.67
RTN3-209ENST00000538995 MMACHCQ9Y4U1 282 aa10.88□□□□□ -0.67
RTN3-209ENST00000538995 IGKV3D-11A0A0A0MRZ8 115 aa10.87□□□□□ -0.67
RTN3-209ENST00000538995 IGHV3-20A0A0C4DH32 117 aa10.87□□□□□ -0.67
RTN3-209ENST00000538995 HMX2A2RU54 273 aa10.87□□□□□ -0.67
RTN3-209ENST00000538995 LRIT2A6NDA9 550 aa10.87□□□□□ -0.67
RTN3-209ENST00000538995 ANKDD1BA6NHY2 528 aa10.87□□□□□ -0.67
RTN3-209ENST00000538995 SUPT3HB4E1H0 165 aa10.87□□□□□ -0.67
RTN3-209ENST00000538995 C4orf51C9J302 202 aa10.87□□□□□ -0.67
RTN3-209ENST00000538995 CDK2AP1O14519 115 aa10.87□□□□□ -0.67
RTN3-209ENST00000538995 ERI3O43414 337 aaKnown RBP10.87□□□□□ -0.67
RTN3-209ENST00000538995 CCNT2O60583 730 aaKnown RBP10.87□□□□□ -0.67
RTN3-209ENST00000538995 PRMT3O60678 531 aa10.87□□□□□ -0.67
RTN3-209ENST00000538995 SUPT3HO75486 399 aa10.87□□□□□ -0.67
RTN3-209ENST00000538995 CDC123O75794 336 aaPredicted RBP10.87□□□□□ -0.67
RTN3-209ENST00000538995 MYBL2P10244 700 aa10.87□□□□□ -0.67
RTN3-209ENST00000538995 SERPINB1P30740 379 aa10.87□□□□□ -0.67
RTN3-209ENST00000538995 HNF4AP41235 474 aa10.87□□□□□ -0.67
RTN3-209ENST00000538995 CASP2P42575 452 aa10.87□□□□□ -0.67
RTN3-209ENST00000538995 OR4D2P58180 307 aa10.87□□□□□ -0.67
RTN3-209ENST00000538995 RAB8AP61006 207 aa10.87□□□□□ -0.67
RTN3-209ENST00000538995 OLR1P78380 273 aa10.87□□□□□ -0.67
RTN3-209ENST00000538995 TGM3Q08188 693 aa10.87□□□□□ -0.67
RTN3-209ENST00000538995 DLG1Q12959 904 aa10.87□□□□□ -0.67
RTN3-209ENST00000538995 DOC2AQ14183 400 aa10.87□□□□□ -0.67
RTN3-209ENST00000538995 HIST2H2ACQ16777 129 aaPredicted RBP10.87□□□□□ -0.67
RTN3-209ENST00000538995 XKR6Q5GH73 641 aa10.87□□□□□ -0.67
RTN3-209ENST00000538995 MROH9Q5TGP6 573 aa10.87□□□□□ -0.67
RTN3-209ENST00000538995 HIST2H2AA3Q6FI13 130 aa10.87□□□□□ -0.67
RTN3-209ENST00000538995 H3F3CQ6NXT2 135 aa10.87□□□□□ -0.67
RTN3-209ENST00000538995 TAOK1Q7L7X3 1001 aa10.87□□□□□ -0.67
RTN3-209ENST00000538995 CENPLQ8N0S6 344 aaPredicted RBP10.87□□□□□ -0.67
RTN3-209ENST00000538995 SHISA5Q8N114 240 aa10.87□□□□□ -0.67
RTN3-209ENST00000538995 LGI4Q8N135 537 aa10.87□□□□□ -0.67
RTN3-209ENST00000538995 ST6GALNAC3Q8NDV1 305 aa10.87□□□□□ -0.67
RTN3-209ENST00000538995 ARMC2Q8NEN0 867 aa10.87□□□□□ -0.67
RTN3-209ENST00000538995 OR2L5Q8NG80 312 aa10.87□□□□□ -0.67
RTN3-209ENST00000538995 KIF18AQ8NI77 898 aa10.87□□□□□ -0.67
RTN3-209ENST00000538995 EXT2Q93063 718 aa10.87□□□□□ -0.67
RTN3-209ENST00000538995 TSLPQ969D9 159 aa10.87□□□□□ -0.67
RTN3-209ENST00000538995 UBE2E3Q969T4 207 aa10.87□□□□□ -0.67
RTN3-209ENST00000538995 ISL2Q96A47 359 aa10.87□□□□□ -0.67
RTN3-209ENST00000538995 MS4A6EQ96DS6 147 aa10.87□□□□□ -0.67
RTN3-209ENST00000538995 AICDAQ9GZX7 198 aa10.87□□□□□ -0.67
RTN3-209ENST00000538995 RHBGQ9H310 441 aa10.87□□□□□ -0.67
RTN3-209ENST00000538995 KLHL31Q9H511 634 aa10.87□□□□□ -0.67
RTN3-209ENST00000538995 PRDM9Q9NQV7 894 aa10.87□□□□□ -0.67
RTN3-209ENST00000538995 SNX15Q9NRS6 342 aa10.87□□□□□ -0.67
RTN3-209ENST00000538995 DMGDHQ9UI17 866 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms