RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 TUFMP49411 452 aaKnown RBP17.87■□□□□ 0.45
SFSWAP-207ENST00000538548 SPHARQ15513 63 aa17.87■□□□□ 0.45
SFSWAP-207ENST00000538548 TEAD4Q15561 434 aa17.87■□□□□ 0.45
SFSWAP-207ENST00000538548 AMIGO1Q86WK6 493 aa17.87■□□□□ 0.45
SFSWAP-207ENST00000538548 BBS7Q8IWZ6 715 aa17.87■□□□□ 0.45
SFSWAP-207ENST00000538548 OR9Q2Q8NGE9 314 aa17.87■□□□□ 0.45
SFSWAP-207ENST00000538548 SLC32A1Q9H598 525 aa17.87■□□□□ 0.45
SFSWAP-207ENST00000538548 ABI2Q9NYB9 513 aaPredicted RBP17.87■□□□□ 0.45
SFSWAP-207ENST00000538548 SH3BP4Q9P0V3 963 aa17.87■□□□□ 0.45
SFSWAP-207ENST00000538548 SSR3Q9UNL2 185 aa17.87■□□□□ 0.45
SFSWAP-207ENST00000538548 CORO2BQ9UQ03 480 aa17.87■□□□□ 0.45
SFSWAP-207ENST00000538548 ALG5Q9Y673 324 aa17.87■□□□□ 0.45
SFSWAP-207ENST00000538548 PLXNA3P51805 1871 aa17.87■□□□□ 0.45
SFSWAP-207ENST00000538548 A0A1W2PQL4 384 aaPredicted RBP17.87■□□□□ 0.45
SFSWAP-207ENST00000538548 OR4Q2P0C623 313 aa17.87■□□□□ 0.45
SFSWAP-207ENST00000538548 IFI30P13284 250 aa17.87■□□□□ 0.45
SFSWAP-207ENST00000538548 COX7A2P14406 83 aa17.87■□□□□ 0.45
SFSWAP-207ENST00000538548 SNRPD2P62316 118 aaKnown RBP17.87■□□□□ 0.45
SFSWAP-207ENST00000538548 LCN1P1Q5VSP4 162 aa17.87■□□□□ 0.45
SFSWAP-207ENST00000538548 LAMTOR1Q6IAA8 161 aa17.87■□□□□ 0.45
SFSWAP-207ENST00000538548 GRAMD2AQ8IUY3 354 aa17.87■□□□□ 0.45
SFSWAP-207ENST00000538548 SYT12Q8IV01 421 aa17.87■□□□□ 0.45
SFSWAP-207ENST00000538548 FAM217AQ8IXS0 508 aa17.87■□□□□ 0.45
SFSWAP-207ENST00000538548 UBE2J2Q8N2K1 259 aa17.87■□□□□ 0.45
SFSWAP-207ENST00000538548 ZBTB2Q8N680 514 aa17.87■□□□□ 0.45
SFSWAP-207ENST00000538548 ZNF557Q8N988 423 aaPredicted RBP17.87■□□□□ 0.45
SFSWAP-207ENST00000538548 MAL2Q969L2 176 aa17.87■□□□□ 0.45
SFSWAP-207ENST00000538548 SPON2Q9BUD6 331 aa17.87■□□□□ 0.45
SFSWAP-207ENST00000538548 MAT2BQ9NZL9 334 aa17.87■□□□□ 0.45
SFSWAP-207ENST00000538548 IL17CQ9P0M4 197 aa17.87■□□□□ 0.45
SFSWAP-207ENST00000538548 NUP50Q9UKX7 468 aa17.87■□□□□ 0.45
SFSWAP-207ENST00000538548 HSPB11Q9Y547 144 aa17.87■□□□□ 0.45
SFSWAP-207ENST00000538548 KCNE1BA0A087WTH5 132 aa17.86■□□□□ 0.45
SFSWAP-207ENST00000538548 CSO75390 466 aaKnown RBP17.86■□□□□ 0.45
SFSWAP-207ENST00000538548 IL1AP01583 271 aa17.86■□□□□ 0.45
SFSWAP-207ENST00000538548 HLA-EP13747 358 aa17.86■□□□□ 0.45
SFSWAP-207ENST00000538548 TACR2P21452 398 aa17.86■□□□□ 0.45
SFSWAP-207ENST00000538548 PSEN2P49810 448 aa17.86■□□□□ 0.45
SFSWAP-207ENST00000538548 PYDC2Q56P42 97 aa17.86■□□□□ 0.45
SFSWAP-207ENST00000538548 DDI2Q5TDH0 399 aa17.86■□□□□ 0.45
SFSWAP-207ENST00000538548 SPRYD7Q5W111 196 aa17.86■□□□□ 0.45
SFSWAP-207ENST00000538548 CFAP52Q8N1V2 620 aa17.86■□□□□ 0.45
SFSWAP-207ENST00000538548 CLDN22Q8N7P3 220 aa17.86■□□□□ 0.45
SFSWAP-207ENST00000538548 C11orf65Q8NCR3 313 aa17.86■□□□□ 0.45
SFSWAP-207ENST00000538548 ZC3HAV1LQ96H79 300 aaKnown RBP17.86■□□□□ 0.45
SFSWAP-207ENST00000538548 ST3GAL5Q9UNP4 418 aa17.86■□□□□ 0.45
SFSWAP-207ENST00000538548 PLXNA4Q9HCM2 1894 aa17.86■□□□□ 0.45
SFSWAP-207ENST00000538548 ZAR1LA6NP61 321 aa17.86■□□□□ 0.45
SFSWAP-207ENST00000538548 GCM2O75603 506 aaPredicted RBP17.86■□□□□ 0.45
SFSWAP-207ENST00000538548 IGLV3-27P01718 113 aa17.86■□□□□ 0.45
SFSWAP-207ENST00000538548 ANXA5P08758 320 aa17.86■□□□□ 0.45
SFSWAP-207ENST00000538548 PSKH1P11801 424 aa17.86■□□□□ 0.45
SFSWAP-207ENST00000538548 PPIBP23284 216 aaKnown RBP17.86■□□□□ 0.45
SFSWAP-207ENST00000538548 MAP2K3P46734 347 aa17.86■□□□□ 0.45
SFSWAP-207ENST00000538548 PTCHD3Q3KNS1 767 aa17.86■□□□□ 0.45
SFSWAP-207ENST00000538548 IFI44LQ53G44 452 aa17.86■□□□□ 0.45
SFSWAP-207ENST00000538548 TOR2AQ5JU69 321 aa17.86■□□□□ 0.45
SFSWAP-207ENST00000538548 DDX53Q86TM3 631 aaKnown RBP17.86■□□□□ 0.45
SFSWAP-207ENST00000538548 SERPINA9Q86WD7 417 aa17.86■□□□□ 0.45
SFSWAP-207ENST00000538548 RBFAQ8N0V3 343 aa17.86■□□□□ 0.45
SFSWAP-207ENST00000538548 NECTIN4Q96NY8 510 aa17.86■□□□□ 0.45
SFSWAP-207ENST00000538548 KATNAL1Q9BW62 490 aa17.86■□□□□ 0.45
SFSWAP-207ENST00000538548 BOCQ9BWV1 1114 aa17.86■□□□□ 0.45
SFSWAP-207ENST00000538548 EBPLQ9BY08 206 aa17.86■□□□□ 0.45
SFSWAP-207ENST00000538548 LATS2Q9NRM7 1088 aa17.86■□□□□ 0.45
SFSWAP-207ENST00000538548 HCN4Q9Y3Q4 1203 aa17.86■□□□□ 0.45
SFSWAP-207ENST00000538548 CDRT1O95170 752 aa17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 POMCP01189 267 aa17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 POU2F1P14859 743 aa17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 TNFRSF1BP20333 461 aa17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 MXD1Q05195 221 aa17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 RGNQ15493 299 aa17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 HSDL2Q6YN16 418 aa17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 KLHDC9Q8NEP7 349 aa17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 OR9Q1Q8NGQ5 310 aa17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 NACC2Q96BF6 587 aa17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 B3GALT6Q96L58 329 aa17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 FAM129BQ96TA1 746 aa17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 MND1Q9BWT6 205 aa17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 HDHD5Q9BXW7 423 aa17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 SLC25A19Q9HC21 320 aa17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 TMEM39AQ9NV64 488 aa17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 FTSJ1Q9UET6 329 aa17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 ALPK3Q96L96 1907 aa17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 TPST2O60704 377 aa17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 F11P03951 625 aa17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 CKMT1AP12532 417 aa17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 GPR15P49685 360 aa17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 C10orf120Q5SQS8 335 aa17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 GPRC6AQ5T6X5 926 aa17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 MEDAGQ5VYS4 303 aa17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 SLC34A3Q8N130 599 aa17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 CLDN19Q8N6F1 224 aa17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 C1orf52Q8N6N3 182 aaKnown RBP17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 GTPBP3Q969Y2 492 aaKnown RBP17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 OMA1Q96E52 524 aa17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 FCRL1Q96LA6 429 aa17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 ARHGAP39Q9C0H5 1083 aa17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 THSD1Q9NS62 852 aa17.85■□□□□ 0.45
SFSWAP-207ENST00000538548 RBFOX1Q9NWB1 397 aaKnown RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms