RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 OR8H1Q8NGG4 311 aa6.45□□□□□ -1.38
USP28-207ENST00000538475 OR4A15Q8NGL6 344 aa6.45□□□□□ -1.38
USP28-207ENST00000538475 OR10A6Q8NH74 314 aa6.45□□□□□ -1.38
USP28-207ENST00000538475 SLC25A46Q96AG3 418 aa6.45□□□□□ -1.38
USP28-207ENST00000538475 TESCQ96BS2 214 aa6.45□□□□□ -1.38
USP28-207ENST00000538475 AHCYL2Q96HN2 611 aaKnown RBP6.45□□□□□ -1.38
USP28-207ENST00000538475 EXOC2Q96KP1 924 aa6.45□□□□□ -1.38
USP28-207ENST00000538475 TEX37Q96LM6 180 aa6.45□□□□□ -1.38
USP28-207ENST00000538475 DPYSL5Q9BPU6 564 aa6.45□□□□□ -1.38
USP28-207ENST00000538475 CPPED1Q9BRF8 314 aaPredicted RBP6.45□□□□□ -1.38
USP28-207ENST00000538475 CHCHD6Q9BRQ6 235 aa6.45□□□□□ -1.38
USP28-207ENST00000538475 AARSD1Q9BTE6 412 aaKnown RBP6.45□□□□□ -1.38
USP28-207ENST00000538475 CENPOQ9BU64 300 aa6.45□□□□□ -1.38
USP28-207ENST00000538475 BBS2Q9BXC9 721 aa6.45□□□□□ -1.38
USP28-207ENST00000538475 B3GNT5Q9BYG0 378 aa6.45□□□□□ -1.38
USP28-207ENST00000538475 FOXQ1Q9C009 403 aa6.45□□□□□ -1.38
USP28-207ENST00000538475 C11orf54Q9H0W9 315 aaPredicted RBP6.45□□□□□ -1.38
USP28-207ENST00000538475 OR51E2Q9H255 320 aa6.45□□□□□ -1.38
USP28-207ENST00000538475 SERHL2Q9H4I8 314 aa6.45□□□□□ -1.38
USP28-207ENST00000538475 CLMPQ9H6B4 373 aa6.45□□□□□ -1.38
USP28-207ENST00000538475 LDAHQ9H6V9 325 aa6.45□□□□□ -1.38
USP28-207ENST00000538475 TDRD3Q9H7E2 651 aaKnown RBP6.45□□□□□ -1.38
USP28-207ENST00000538475 ANKRA2Q9H9E1 313 aa6.45□□□□□ -1.38
USP28-207ENST00000538475 CARS2Q9HA77 564 aaKnown RBP6.45□□□□□ -1.38
USP28-207ENST00000538475 FBRSQ9HAH7 460 aa6.45□□□□□ -1.38
USP28-207ENST00000538475 PRDM5Q9NQX1 630 aaPredicted RBP6.45□□□□□ -1.38
USP28-207ENST00000538475 C14orf119Q9NWQ9 140 aa6.45□□□□□ -1.38
USP28-207ENST00000538475 TAS2R13Q9NYV9 303 aa6.45□□□□□ -1.38
USP28-207ENST00000538475 NUDT4Q9NZJ9 180 aa6.45□□□□□ -1.38
USP28-207ENST00000538475 PDP1Q9P0J1 537 aaPredicted RBP6.45□□□□□ -1.38
USP28-207ENST00000538475 VAPAQ9P0L0 249 aa6.45□□□□□ -1.38
USP28-207ENST00000538475 SLAMF8Q9P0V8 285 aa6.45□□□□□ -1.38
USP28-207ENST00000538475 COPZ2Q9P299 210 aa6.45□□□□□ -1.38
USP28-207ENST00000538475 MUTYHQ9UIF7 546 aa6.45□□□□□ -1.38
USP28-207ENST00000538475 CCNL1Q9UK58 526 aaPredicted RBP6.45□□□□□ -1.38
USP28-207ENST00000538475 SSR3Q9UNL2 185 aa6.45□□□□□ -1.38
USP28-207ENST00000538475 PADI2Q9Y2J8 665 aa6.45□□□□□ -1.38
USP28-207ENST00000538475 NEUROG3Q9Y4Z2 214 aa6.45□□□□□ -1.38
USP28-207ENST00000538475 ALG5Q9Y673 324 aa6.45□□□□□ -1.38
USP28-207ENST00000538475 V9GYQ6 96 aa6.45□□□□□ -1.38
USP28-207ENST00000538475 ZNF106Q9H2Y7 1883 aaKnown RBP6.45□□□□□ -1.38
USP28-207ENST00000538475 PIKFYVEQ9Y2I7 2098 aa6.45□□□□□ -1.38
USP28-207ENST00000538475 FAM240BA0A1B0GVZ2 78 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 HYKKA2RU49 373 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 C7orf66A4D0T2 115 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 SUPT3HB4E1H0 165 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 F5H423 210 aaPredicted RBP6.44□□□□□ -1.38
USP28-207ENST00000538475 ABCD4O14678 606 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 YKT6O15498 198 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 PI15O43692 258 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 HBP1O60381 514 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 KCNJ13O60928 360 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 ATG13O75143 517 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 DHFRP00374 187 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 OTCP00480 354 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 ITGB1P05556 798 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 SLC2A3P11169 496 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 MAGP20916 626 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 GALP22466 123 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 PRKACGP22612 351 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 PRPH2P23942 346 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 CD96P40200 585 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 BRCC3P46736 316 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 MAPKAPK2P49137 400 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 HOXA1P49639 335 aaPredicted RBP6.44□□□□□ -1.38
USP28-207ENST00000538475 TPMTP51580 245 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 RENBPP51606 427 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 CACNB3P54284 484 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 CDKN2DP55273 166 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 FOXA1P55317 472 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 CDC42P60953 191 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 YBX1P67809 324 aaKnown RBP6.44□□□□□ -1.38
USP28-207ENST00000538475 CYP4F2P78329 520 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 CDC42EP1Q00587 391 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 ZNF33BQ06732 778 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 LRRC74AQ0VAA2 488 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 ST3GAL4Q11206 333 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 MLLT11Q13015 90 aaPredicted RBP6.44□□□□□ -1.38
USP28-207ENST00000538475 OLIG2Q13516 323 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 BAK1Q16611 211 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 MICAQ29983 383 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 TMEM201Q5SNT2 666 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 TRIQKQ629K1 86 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 AFMIDQ63HM1 303 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 EEF1DP3Q658K8 133 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 PLAG1Q6DJT9 500 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 MZT2AQ6P582 158 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 TMEM207Q6UWW9 146 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 METTL7BQ6UX53 244 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 FAM131AQ6UXB0 335 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 CBLL1Q75N03 491 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 TRMT1LQ7Z2T5 733 aaKnown RBP6.44□□□□□ -1.38
USP28-207ENST00000538475 TLK2Q86UE8 772 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 HS3ST5Q8IZT8 346 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 SPATA6LQ8N4H0 392 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 EIF4E3Q8N5X7 224 aaKnown RBP6.44□□□□□ -1.38
USP28-207ENST00000538475 FAM86B1Q8N7N1 296 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 ZNF366Q8N895 744 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 CHST13Q8NET6 341 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 PROKR2Q8NFJ6 384 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms