RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 NUDT2P50583 147 aa11.76□□□□□ -0.53
DDB1-209ENST00000537877 MAPK12P53778 367 aa11.76□□□□□ -0.53
DDB1-209ENST00000537877 ARF3P61204 181 aaPredicted RBP11.76□□□□□ -0.53
DDB1-209ENST00000537877 TRA2BP62995 288 aaKnown RBP11.76□□□□□ -0.53
DDB1-209ENST00000537877 SRSF11Q05519 484 aaKnown RBP11.76□□□□□ -0.53
DDB1-209ENST00000537877 ACTN3Q08043 901 aaPredicted RBP11.76□□□□□ -0.53
DDB1-209ENST00000537877 SLC14A1Q13336 389 aa11.76□□□□□ -0.53
DDB1-209ENST00000537877 TIGD2Q4W5G0 525 aa11.76□□□□□ -0.53
DDB1-209ENST00000537877 PERM1Q5SV97 790 aa11.76□□□□□ -0.53
DDB1-209ENST00000537877 CCNYL2Q5T2Q4 361 aa11.76□□□□□ -0.53
DDB1-209ENST00000537877 FRMPD2BQ6IN97 320 aa11.76□□□□□ -0.53
DDB1-209ENST00000537877 ABHD17CQ6PCB6 329 aa11.76□□□□□ -0.53
DDB1-209ENST00000537877 C16orf89Q6UX73 402 aa11.76□□□□□ -0.53
DDB1-209ENST00000537877 HACD2Q6Y1H2 254 aa11.76□□□□□ -0.53
DDB1-209ENST00000537877 RINLQ6ZS11 566 aa11.76□□□□□ -0.53
DDB1-209ENST00000537877 MSANTD1Q6ZTZ1 278 aa11.76□□□□□ -0.53
DDB1-209ENST00000537877 ABHD13Q7L211 337 aa11.76□□□□□ -0.53
DDB1-209ENST00000537877 R3HCC1LQ7Z5L2 792 aaKnown RBP11.76□□□□□ -0.53
DDB1-209ENST00000537877 UBE3DQ7Z6J8 389 aa11.76□□□□□ -0.53
DDB1-209ENST00000537877 ZCCHC7Q8N3Z6 543 aaKnown RBP11.76□□□□□ -0.53
DDB1-209ENST00000537877 DNAJC22Q8N4W6 341 aa11.76□□□□□ -0.53
DDB1-209ENST00000537877 KRTCAP2Q8N6L1 136 aa11.76□□□□□ -0.53
DDB1-209ENST00000537877 CSNK1A1LQ8N752 337 aa11.76□□□□□ -0.53
DDB1-209ENST00000537877 PRSS33Q8NF86 280 aa11.76□□□□□ -0.53
DDB1-209ENST00000537877 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.76□□□□□ -0.53
DDB1-209ENST00000537877 C16orf78Q8WTQ4 265 aa11.76□□□□□ -0.53
DDB1-209ENST00000537877 ROPN1LQ96C74 230 aa11.76□□□□□ -0.53
DDB1-209ENST00000537877 MTERF3Q96E29 417 aa11.76□□□□□ -0.53
DDB1-209ENST00000537877 SLC45A3Q96JT2 553 aa11.76□□□□□ -0.53
DDB1-209ENST00000537877 EGLN2Q96KS0 407 aa11.76□□□□□ -0.53
DDB1-209ENST00000537877 C17orf62Q9BQA9 187 aa11.76□□□□□ -0.53
DDB1-209ENST00000537877 AICDAQ9GZX7 198 aa11.76□□□□□ -0.53
DDB1-209ENST00000537877 COPS7BQ9H9Q2 264 aaPredicted RBP11.76□□□□□ -0.53
DDB1-209ENST00000537877 FAM60AQ9NP50 221 aa11.76□□□□□ -0.53
DDB1-209ENST00000537877 PDE7BQ9NP56 450 aa11.76□□□□□ -0.53
DDB1-209ENST00000537877 SOHLH2Q9NX45 425 aa11.76□□□□□ -0.53
DDB1-209ENST00000537877 LOC105369274A0A096LPK9 316 aa11.75□□□□□ -0.53
DDB1-209ENST00000537877 A0A0A6YYD5 115 aa11.75□□□□□ -0.53
DDB1-209ENST00000537877 IGHV5-51A0A0C4DH38 117 aa11.75□□□□□ -0.53
DDB1-209ENST00000537877 LOC102723532A0A0G2JNH3 316 aa11.75□□□□□ -0.53
DDB1-209ENST00000537877 C9JVG2 144 aa11.75□□□□□ -0.53
DDB1-209ENST00000537877 RTCAO00442 366 aaKnown RBP11.75□□□□□ -0.53
DDB1-209ENST00000537877 FBP2O00757 339 aa11.75□□□□□ -0.53
DDB1-209ENST00000537877 P2RX6O15547 441 aa11.75□□□□□ -0.53
DDB1-209ENST00000537877 KIF1CO43896 1103 aaKnown RBP11.75□□□□□ -0.53
DDB1-209ENST00000537877 PRAMEF10O60809 474 aa11.75□□□□□ -0.53
DDB1-209ENST00000537877 GUCY1B2O75343 617 aa11.75□□□□□ -0.53
DDB1-209ENST00000537877 CPNE6O95741 557 aa11.75□□□□□ -0.53
DDB1-209ENST00000537877 DDX5P17844 614 aaKnown RBP11.75□□□□□ -0.53
DDB1-209ENST00000537877 ITGAXP20702 1163 aa11.75□□□□□ -0.53
DDB1-209ENST00000537877 HIST1H1TP22492 207 aaPredicted RBP11.75□□□□□ -0.53
DDB1-209ENST00000537877 S100A3P33764 101 aa11.75□□□□□ -0.53
DDB1-209ENST00000537877 CPOXP36551 454 aa11.75□□□□□ -0.53
DDB1-209ENST00000537877 PLA2G16P53816 162 aa11.75□□□□□ -0.53
DDB1-209ENST00000537877 CFHR1Q03591 330 aa11.75□□□□□ -0.53
DDB1-209ENST00000537877 KLC1Q07866 573 aa11.75□□□□□ -0.53
DDB1-209ENST00000537877 TCF15Q12870 199 aa11.75□□□□□ -0.53
DDB1-209ENST00000537877 ART3Q13508 389 aa11.75□□□□□ -0.53
DDB1-209ENST00000537877 HKDC1Q2TB90 917 aa11.75□□□□□ -0.53
DDB1-209ENST00000537877 FAM174BQ3ZCQ3 159 aa11.75□□□□□ -0.53
DDB1-209ENST00000537877 VPS26BQ4G0F5 336 aa11.75□□□□□ -0.53
DDB1-209ENST00000537877 SPANXN4Q5MJ08 99 aa11.75□□□□□ -0.53
DDB1-209ENST00000537877 FAM71E1Q6IPT2 247 aa11.75□□□□□ -0.53
DDB1-209ENST00000537877 TMEM71Q6P5X7 295 aa11.75□□□□□ -0.53
DDB1-209ENST00000537877 CAMKMTQ7Z624 323 aa11.75□□□□□ -0.53
DDB1-209ENST00000537877 MCATQ8IVS2 390 aaKnown RBP11.75□□□□□ -0.53
DDB1-209ENST00000537877 OR4N4Q8N0Y3 316 aa11.75□□□□□ -0.53
DDB1-209ENST00000537877 ARHGAP24Q8N264 748 aa11.75□□□□□ -0.53
DDB1-209ENST00000537877 TMEM132CQ8N3T6 1108 aa11.75□□□□□ -0.53
DDB1-209ENST00000537877 CDC26Q8NHZ8 85 aa11.75□□□□□ -0.53
DDB1-209ENST00000537877 IFI44Q8TCB0 444 aa11.75□□□□□ -0.53
DDB1-209ENST00000537877 ZNF764Q96H86 408 aaPredicted RBP11.75□□□□□ -0.53
DDB1-209ENST00000537877 ZNF285Q96NJ3 590 aa11.75□□□□□ -0.53
DDB1-209ENST00000537877 TEFMQ96QE5 360 aaKnown RBP11.75□□□□□ -0.53
DDB1-209ENST00000537877 PRPF18Q99633 342 aaKnown RBP11.75□□□□□ -0.53
DDB1-209ENST00000537877 SORBS1Q9BX66 1292 aaKnown RBP11.75□□□□□ -0.53
DDB1-209ENST00000537877 KLHL31Q9H511 634 aa11.75□□□□□ -0.53
DDB1-209ENST00000537877 ATP6V1HQ9UI12 483 aa11.75□□□□□ -0.53
DDB1-209ENST00000537877 PLCL2Q9UPR0 1127 aa11.75□□□□□ -0.53
DDB1-209ENST00000537877 RALGAPA1Q6GYQ0 2036 aa11.74□□□□□ -0.53
DDB1-209ENST00000537877 C4orf51C9J302 202 aa11.74□□□□□ -0.53
DDB1-209ENST00000537877 SH3BP5O60239 455 aa11.74□□□□□ -0.53
DDB1-209ENST00000537877 LRATO95237 230 aa11.74□□□□□ -0.53
DDB1-209ENST00000537877 LDOC1O95751 146 aaPredicted RBP11.74□□□□□ -0.53
DDB1-209ENST00000537877 NPPAP01160 153 aa11.74□□□□□ -0.53
DDB1-209ENST00000537877 STATHP02808 62 aa11.74□□□□□ -0.53
DDB1-209ENST00000537877 GBAP04062 536 aa11.74□□□□□ -0.53
DDB1-209ENST00000537877 RPLP0P05388 317 aaKnown RBP11.74□□□□□ -0.53
DDB1-209ENST00000537877 PGRP06401 933 aa11.74□□□□□ -0.53
DDB1-209ENST00000537877 ANKRD34CP0C6C1 535 aa11.74□□□□□ -0.53
DDB1-209ENST00000537877 MSL3P1P0C860 447 aa11.74□□□□□ -0.53
DDB1-209ENST00000537877 ZNF888P0CJ79 500 aaPredicted RBP11.74□□□□□ -0.53
DDB1-209ENST00000537877 SMIM10L1P0DMW3 83 aa11.74□□□□□ -0.53
DDB1-209ENST00000537877 COX7A2P14406 83 aa11.74□□□□□ -0.53
DDB1-209ENST00000537877 ATP5A1P25705 553 aaKnown RBP11.74□□□□□ -0.53
DDB1-209ENST00000537877 KIR3DL1P43629 444 aa11.74□□□□□ -0.53
DDB1-209ENST00000537877 GABRA4P48169 554 aa11.74□□□□□ -0.53
DDB1-209ENST00000537877 ARL4DP49703 201 aa11.74□□□□□ -0.53
DDB1-209ENST00000537877 VSX2P58304 361 aaPredicted RBP11.74□□□□□ -0.53
DDB1-209ENST00000537877 TAS2R50P59544 299 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms