RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 ZNF551Q7Z340 670 aaPredicted RBP12.99□□□□□ -0.33
SMG6-203ENST00000536871 C10orf111Q8N326 155 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 OR14C36Q8NHC7 312 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 RGMAQ96B86 450 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 C12orf66Q96MD2 445 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 IL17FQ96PD4 163 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 SLC35A5Q9BS91 424 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 DOHHQ9BU89 302 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 NLNQ9BYT8 704 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 BTBD1Q9H0C5 482 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 C8orf33Q9H7E9 229 aaPredicted RBP12.99□□□□□ -0.33
SMG6-203ENST00000536871 REEP1Q9H902 201 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 TIMMDC1Q9NPL8 285 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 TBCCD1Q9NVR7 557 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 THUMPD1Q9NXG2 353 aaKnown RBP12.99□□□□□ -0.33
SMG6-203ENST00000536871 RSL24D1Q9UHA3 163 aaKnown RBP12.99□□□□□ -0.33
SMG6-203ENST00000536871 EXO1Q9UQ84 846 aaKnown RBP12.99□□□□□ -0.33
SMG6-203ENST00000536871 PADI2Q9Y2J8 665 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.99□□□□□ -0.33
SMG6-203ENST00000536871 PRKAB1Q9Y478 270 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 ZNF451Q9Y4E5 1061 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 COLEC10Q9Y6Z7 277 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 LRRK1Q38SD2 2015 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 A0A1W2PQU0 124 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 VILLO15195 856 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 LINC01565O15544 149 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 RNGTTO60942 597 aaKnown RBP12.99□□□□□ -0.33
SMG6-203ENST00000536871 GUCY1B2O75343 617 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 DRD1P21728 446 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 UQCRC2P22695 453 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 RYKP34925 604 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 WASP42768 502 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 PRIM2P49643 509 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 CDK9P50750 372 aaKnown RBP12.99□□□□□ -0.33
SMG6-203ENST00000536871 MAPK12P53778 367 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 KIAA1024LP59773 190 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 HBA1P69905 142 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 SPIDRQ14159 915 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 KRT33BQ14525 404 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 UAP1L1Q3KQV9 507 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 C2orf27AQ580R0 203 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 CHST15Q7LFX5 561 aaPredicted RBP12.99□□□□□ -0.33
SMG6-203ENST00000536871 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.99□□□□□ -0.33
SMG6-203ENST00000536871 OR5P2Q8WZ92 322 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 CAMK1GQ96NX5 476 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 APOOQ9BUR5 198 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 TOR3AQ9H497 397 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 ZSCAN32Q9NX65 697 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 OR1A2Q9Y585 309 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 MYO7AQ13402 2215 aa12.98□□□□□ -0.33
SMG6-203ENST00000536871 PRRC2BQ5JSZ5 2229 aaKnown RBP12.98□□□□□ -0.33
SMG6-203ENST00000536871 TRBC2A0A5B9 178 aa12.98□□□□□ -0.33
SMG6-203ENST00000536871 EPOPA6NHQ4 379 aa12.98□□□□□ -0.33
SMG6-203ENST00000536871 PRR19A6NJB7 356 aa12.98□□□□□ -0.33
SMG6-203ENST00000536871 ADAMDEC1O15204 470 aa12.98□□□□□ -0.33
SMG6-203ENST00000536871 YY2O15391 372 aa12.98□□□□□ -0.33
SMG6-203ENST00000536871 DNAJB5O75953 348 aa12.98□□□□□ -0.33
SMG6-203ENST00000536871 B3GALT4O96024 378 aa12.98□□□□□ -0.33
SMG6-203ENST00000536871 CEACAM5P06731 702 aa12.98□□□□□ -0.33
SMG6-203ENST00000536871 ACP5P13686 325 aa12.98□□□□□ -0.33
SMG6-203ENST00000536871 DRD2P14416 443 aa12.98□□□□□ -0.33
SMG6-203ENST00000536871 PKLRP30613 574 aa12.98□□□□□ -0.33
SMG6-203ENST00000536871 ADPRHP54922 357 aa12.98□□□□□ -0.33
SMG6-203ENST00000536871 KEAP1Q14145 624 aa12.98□□□□□ -0.33
SMG6-203ENST00000536871 ANKRD26P1Q6NSI1 321 aa12.98□□□□□ -0.33
SMG6-203ENST00000536871 VN1R5Q7Z5H4 357 aa12.98□□□□□ -0.33
SMG6-203ENST00000536871 DCP2Q8IU60 420 aaKnown RBP12.98□□□□□ -0.33
SMG6-203ENST00000536871 SRFBP1Q8NEF9 429 aaKnown RBP12.98□□□□□ -0.33
SMG6-203ENST00000536871 WDR48Q8TAF3 677 aa12.98□□□□□ -0.33
SMG6-203ENST00000536871 ZNF420Q8TAQ5 688 aaPredicted RBP12.98□□□□□ -0.33
SMG6-203ENST00000536871 MAGED4Q96JG8 741 aa12.98□□□□□ -0.33
SMG6-203ENST00000536871 HSH2DQ96JZ2 352 aa12.98□□□□□ -0.33
SMG6-203ENST00000536871 MUS81Q96NY9 551 aa12.98□□□□□ -0.33
SMG6-203ENST00000536871 INSM2Q96T92 566 aaPredicted RBP12.98□□□□□ -0.33
SMG6-203ENST00000536871 EPYCQ99645 322 aa12.98□□□□□ -0.33
SMG6-203ENST00000536871 SPNS1Q9H2V7 528 aa12.98□□□□□ -0.33
SMG6-203ENST00000536871 SERGEFQ9UGK8 458 aa12.98□□□□□ -0.33
SMG6-203ENST00000536871 ANGPT4Q9Y264 503 aa12.98□□□□□ -0.33
SMG6-203ENST00000536871 PCDHGB3Q9Y5G1 929 aa12.98□□□□□ -0.33
SMG6-203ENST00000536871 PCYT1BQ9Y5K3 369 aaPredicted RBP12.98□□□□□ -0.33
SMG6-203ENST00000536871 LOC100130705A0A1B0GUX0 176 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 A0A1W2PPV9 198 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 ANHXE9PGG2 379 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 TOR1BO14657 336 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 HS6ST1O60243 411 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 TNFRSF21O75509 655 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 SEC24DO94855 1032 aaPredicted RBP12.97□□□□□ -0.33
SMG6-203ENST00000536871 C6orf47O95873 294 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 IL3P08700 152 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 HOXB2P14652 356 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 CHI3L1P36222 383 aaPredicted RBP12.97□□□□□ -0.33
SMG6-203ENST00000536871 CRATP43155 626 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 TSFMP43897 325 aaKnown RBP12.97□□□□□ -0.33
SMG6-203ENST00000536871 RAB15P59190 212 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 SELENOWP63302 87 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 GAB1Q13480 694 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 MLC1Q15049 377 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 ZNF385BQ569K4 471 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 TMEM196Q5HYL7 178 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 CRB2Q5IJ48 1285 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms