RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 DSCR3O14972 297 aa17.28■□□□□ 0.36
RAB40C-203ENST00000535977 BNIP3LO60238 219 aa17.28■□□□□ 0.36
RAB40C-203ENST00000535977 MED26O95402 600 aa17.28■□□□□ 0.36
RAB40C-203ENST00000535977 FGF19O95750 216 aa17.28■□□□□ 0.36
RAB40C-203ENST00000535977 LCKP06239 509 aa17.28■□□□□ 0.36
RAB40C-203ENST00000535977 GSTM1P09488 218 aa17.28■□□□□ 0.36
RAB40C-203ENST00000535977 DDX6P26196 483 aaKnown RBP eCLIP17.28■□□□□ 0.36
RAB40C-203ENST00000535977 RYKP34925 604 aa17.28■□□□□ 0.36
RAB40C-203ENST00000535977 MAPK9P45984 424 aa17.28■□□□□ 0.36
RAB40C-203ENST00000535977 MTAPQ13126 283 aa17.28■□□□□ 0.36
RAB40C-203ENST00000535977 STARD3Q14849 445 aa17.28■□□□□ 0.36
RAB40C-203ENST00000535977 NKG7Q16617 165 aa17.28■□□□□ 0.36
RAB40C-203ENST00000535977 PUS10Q3MIT2 529 aaKnown RBP17.28■□□□□ 0.36
RAB40C-203ENST00000535977 ERICH5Q6P6B1 374 aa17.28■□□□□ 0.36
RAB40C-203ENST00000535977 LILRA6Q6PI73 481 aa17.28■□□□□ 0.36
RAB40C-203ENST00000535977 CLHC1Q8NHS4 586 aa17.28■□□□□ 0.36
RAB40C-203ENST00000535977 NELL1Q92832 810 aa17.28■□□□□ 0.36
RAB40C-203ENST00000535977 CDADC1Q9BWV3 514 aa17.28■□□□□ 0.36
RAB40C-203ENST00000535977 ZBP1Q9H171 429 aa17.28■□□□□ 0.36
RAB40C-203ENST00000535977 FAM83DQ9H4H8 585 aa17.28■□□□□ 0.36
RAB40C-203ENST00000535977 TBX21Q9UL17 535 aa17.28■□□□□ 0.36
RAB40C-203ENST00000535977 GRIP1Q9Y3R0 1128 aa17.28■□□□□ 0.36
RAB40C-203ENST00000535977 H3BQ06 376 aaPredicted RBP17.27■□□□□ 0.36
RAB40C-203ENST00000535977 SCO1O75880 301 aa17.27■□□□□ 0.36
RAB40C-203ENST00000535977 SERPINA1P01009 418 aa17.27■□□□□ 0.36
RAB40C-203ENST00000535977 IFI30P13284 250 aa17.27■□□□□ 0.36
RAB40C-203ENST00000535977 KIR3DL1P43629 444 aa17.27■□□□□ 0.36
RAB40C-203ENST00000535977 TAGLNQ01995 201 aaKnown RBP17.27■□□□□ 0.36
RAB40C-203ENST00000535977 NOXRED1Q6NXP6 359 aa17.27■□□□□ 0.36
RAB40C-203ENST00000535977 RASGRP3Q8IV61 690 aa17.27■□□□□ 0.36
RAB40C-203ENST00000535977 FBLIM1Q8WUP2 373 aa17.27■□□□□ 0.36
RAB40C-203ENST00000535977 GON7Q9BXV9 100 aa17.27■□□□□ 0.36
RAB40C-203ENST00000535977 NFKBIL1Q9UBC1 381 aaPredicted RBP17.27■□□□□ 0.36
RAB40C-203ENST00000535977 TBC1D24Q9ULP9 559 aa17.27■□□□□ 0.36
RAB40C-203ENST00000535977 HMX3A6NHT5 357 aa17.27■□□□□ 0.36
RAB40C-203ENST00000535977 BCKDKO14874 412 aa17.27■□□□□ 0.36
RAB40C-203ENST00000535977 ZNF780AO75290 641 aaPredicted RBP17.27■□□□□ 0.36
RAB40C-203ENST00000535977 IL7P13232 177 aa17.27■□□□□ 0.36
RAB40C-203ENST00000535977 VIPR1P32241 457 aa17.27■□□□□ 0.36
RAB40C-203ENST00000535977 UGT2B10P36537 528 aa17.27■□□□□ 0.36
RAB40C-203ENST00000535977 DCTP40126 519 aa17.27■□□□□ 0.36
RAB40C-203ENST00000535977 C21orf58P58505 322 aa17.27■□□□□ 0.36
RAB40C-203ENST00000535977 SLAMF1Q13291 335 aa17.27■□□□□ 0.36
RAB40C-203ENST00000535977 SYT16Q17RD7 645 aa17.27■□□□□ 0.36
RAB40C-203ENST00000535977 DUOXA1Q1HG43 343 aa17.27■□□□□ 0.36
RAB40C-203ENST00000535977 TRIM60Q495X7 471 aa17.27■□□□□ 0.36
RAB40C-203ENST00000535977 GTDC1Q4AE62 458 aa17.27■□□□□ 0.36
RAB40C-203ENST00000535977 PHACTR4Q8IZ21 702 aa17.27■□□□□ 0.36
RAB40C-203ENST00000535977 NETO1Q8TDF5 533 aa17.27■□□□□ 0.36
RAB40C-203ENST00000535977 TSSK3Q96PN8 268 aa17.27■□□□□ 0.36
RAB40C-203ENST00000535977 SDHCQ99643 169 aaPredicted RBP17.27■□□□□ 0.36
RAB40C-203ENST00000535977 BEX2Q9BXY8 128 aa17.27■□□□□ 0.36
RAB40C-203ENST00000535977 ROGDIQ9GZN7 287 aa17.27■□□□□ 0.36
RAB40C-203ENST00000535977 TMPRSS11EQ9UL52 423 aa17.27■□□□□ 0.36
RAB40C-203ENST00000535977 SLC22A14Q9Y267 594 aa17.27■□□□□ 0.36
RAB40C-203ENST00000535977 TPRKBQ9Y3C4 175 aa17.27■□□□□ 0.36
RAB40C-203ENST00000535977 AIREO43918 545 aa17.27■□□□□ 0.35
RAB40C-203ENST00000535977 SLCO2B1O94956 709 aa17.27■□□□□ 0.35
RAB40C-203ENST00000535977 DNTTP04053 509 aa17.27■□□□□ 0.35
RAB40C-203ENST00000535977 C8AP07357 584 aa17.27■□□□□ 0.35
RAB40C-203ENST00000535977 HSD3B1P14060 373 aa17.27■□□□□ 0.35
RAB40C-203ENST00000535977 HSD3B2P26439 372 aa17.27■□□□□ 0.35
RAB40C-203ENST00000535977 PTPN6P29350 595 aa17.27■□□□□ 0.35
RAB40C-203ENST00000535977 UQCRC1P31930 480 aa17.27■□□□□ 0.35
RAB40C-203ENST00000535977 MAGEA2P43356 314 aa17.27■□□□□ 0.35
RAB40C-203ENST00000535977 P2RY13Q9BPV8 354 aa17.27■□□□□ 0.35
RAB40C-203ENST00000535977 FAM83CQ9BQN1 747 aa17.27■□□□□ 0.35
RAB40C-203ENST00000535977 ADH1AP07327 375 aa17.26■□□□□ 0.35
RAB40C-203ENST00000535977 ARHGDIAP52565 204 aa17.26■□□□□ 0.35
RAB40C-203ENST00000535977 SEMG2Q02383 582 aa17.26■□□□□ 0.35
RAB40C-203ENST00000535977 PCDH1Q08174 1060 aa17.26■□□□□ 0.35
RAB40C-203ENST00000535977 CHIT1Q13231 466 aa17.26■□□□□ 0.35
RAB40C-203ENST00000535977 RFLNAQ6ZTI6 216 aa17.26■□□□□ 0.35
RAB40C-203ENST00000535977 RAB43Q86YS6 212 aa17.26■□□□□ 0.35
RAB40C-203ENST00000535977 PMEPA1Q969W9 287 aa17.26■□□□□ 0.35
RAB40C-203ENST00000535977 VWCEQ96DN2 955 aa17.26■□□□□ 0.35
RAB40C-203ENST00000535977 APIPQ96GX9 242 aa17.26■□□□□ 0.35
RAB40C-203ENST00000535977 CCDC120Q96HB5 630 aa17.26■□□□□ 0.35
RAB40C-203ENST00000535977 NXF2Q9GZY0 626 aaKnown RBP17.26■□□□□ 0.35
RAB40C-203ENST00000535977 FAM120CQ9NX05 1096 aaKnown RBP17.26■□□□□ 0.35
RAB40C-203ENST00000535977 RPS6KA6Q9UK32 745 aa17.26■□□□□ 0.35
RAB40C-203ENST00000535977 UTS2RQ9UKP6 389 aa17.26■□□□□ 0.35
RAB40C-203ENST00000535977 SLC16A6O15403 523 aa17.26■□□□□ 0.35
RAB40C-203ENST00000535977 SNX4O95219 450 aa17.26■□□□□ 0.35
RAB40C-203ENST00000535977 SLC15A1P46059 708 aa17.26■□□□□ 0.35
RAB40C-203ENST00000535977 IRF8Q02556 426 aa17.26■□□□□ 0.35
RAB40C-203ENST00000535977 ZXDCQ2QGD7 858 aaPredicted RBP17.26■□□□□ 0.35
RAB40C-203ENST00000535977 DET1Q7L5Y6 550 aa17.26■□□□□ 0.35
RAB40C-203ENST00000535977 KLHDC8AQ8IYD2 350 aa17.26■□□□□ 0.35
RAB40C-203ENST00000535977 TRAM1L1Q8N609 369 aa17.26■□□□□ 0.35
RAB40C-203ENST00000535977 CLP1Q92989 425 aaKnown RBP17.26■□□□□ 0.35
RAB40C-203ENST00000535977 TMEM39AQ9NV64 488 aa17.26■□□□□ 0.35
RAB40C-203ENST00000535977 ERVK13-1Q9NX77 482 aa17.26■□□□□ 0.35
RAB40C-203ENST00000535977 PPT2Q9UMR5 302 aa17.26■□□□□ 0.35
RAB40C-203ENST00000535977 RUVBL1Q9Y265 456 aaKnown RBP17.26■□□□□ 0.35
RAB40C-203ENST00000535977 AP1M2Q9Y6Q5 423 aa17.26■□□□□ 0.35
RAB40C-203ENST00000535977 MEIOCA2RUB1 952 aa17.25■□□□□ 0.35
RAB40C-203ENST00000535977 OR2A25A4D2G3 310 aa17.25■□□□□ 0.35
RAB40C-203ENST00000535977 TRIM77I1YAP6 450 aa17.25■□□□□ 0.35
RAB40C-203ENST00000535977 JUNDP17535 347 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms