RNA–Protein interactions for RNA: ENST00000535297.1

TMEM258-203, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-203ENST00000535297 RBCK1Q9BYM8 510 aa13.02□□□□□ -0.33
TMEM258-203ENST00000535297 VPS11Q9H270 941 aa13.02□□□□□ -0.33
TMEM258-203ENST00000535297 RHBGQ9H310 441 aa13.02□□□□□ -0.33
TMEM258-203ENST00000535297 KLHL31Q9H511 634 aa13.02□□□□□ -0.33
TMEM258-203ENST00000535297 CLMPQ9H6B4 373 aa13.02□□□□□ -0.33
TMEM258-203ENST00000535297 EPS8L2Q9H6S3 715 aa13.02□□□□□ -0.33
TMEM258-203ENST00000535297 L2HGDHQ9H9P8 463 aa13.02□□□□□ -0.33
TMEM258-203ENST00000535297 UBR5O95071 2799 aaPredicted RBP13.02□□□□□ -0.33
TMEM258-203ENST00000535297 TENM4Q6N022 2769 aa13.02□□□□□ -0.33
TMEM258-203ENST00000535297 CNTRLQ7Z7A1 2325 aa13.01□□□□□ -0.33
TMEM258-203ENST00000535297 A0A088AWK7 358 aa13.01□□□□□ -0.33
TMEM258-203ENST00000535297 EXOC1LA0A1B0GW35 172 aa13.01□□□□□ -0.33
TMEM258-203ENST00000535297 LRIT2A6NDA9 550 aa13.01□□□□□ -0.33
TMEM258-203ENST00000535297 ANKDD1BA6NHY2 528 aa13.01□□□□□ -0.33
TMEM258-203ENST00000535297 TTLL8A6PVC2 850 aa13.01□□□□□ -0.33
TMEM258-203ENST00000535297 MAGEB17A8MXT2 336 aa13.01□□□□□ -0.33
TMEM258-203ENST00000535297 C4orf51C9J302 202 aa13.01□□□□□ -0.33
TMEM258-203ENST00000535297 POC1B-GALNT4F8VUJ3 575 aa13.01□□□□□ -0.33
TMEM258-203ENST00000535297 KLK8O60259 260 aa13.01□□□□□ -0.33
TMEM258-203ENST00000535297 B3GALT4O96024 378 aa13.01□□□□□ -0.33
TMEM258-203ENST00000535297 PRR35P0CG20 571 aa13.01□□□□□ -0.33
TMEM258-203ENST00000535297 ICAM2P13598 275 aa13.01□□□□□ -0.33
TMEM258-203ENST00000535297 GFAPP14136 432 aa13.01□□□□□ -0.33
TMEM258-203ENST00000535297 CD22P20273 847 aa13.01□□□□□ -0.33
TMEM258-203ENST00000535297 ZNF10P21506 573 aaPredicted RBP13.01□□□□□ -0.33
TMEM258-203ENST00000535297 SERPINB1P30740 379 aa13.01□□□□□ -0.33
TMEM258-203ENST00000535297 SOX11P35716 441 aa13.01□□□□□ -0.33
TMEM258-203ENST00000535297 CD97P48960 835 aa13.01□□□□□ -0.33
TMEM258-203ENST00000535297 ALDH18A1P54886 795 aaKnown RBP13.01□□□□□ -0.33
TMEM258-203ENST00000535297 MLLT10P55197 1068 aa13.01□□□□□ -0.33
TMEM258-203ENST00000535297 OLR1P78380 273 aa13.01□□□□□ -0.33
TMEM258-203ENST00000535297 RHAGQ02094 409 aa13.01□□□□□ -0.33
TMEM258-203ENST00000535297 TSNAXIP1Q2TAA8 658 aa13.01□□□□□ -0.33
TMEM258-203ENST00000535297 ADPRMQ3LIE5 342 aa13.01□□□□□ -0.33
TMEM258-203ENST00000535297 CRB2Q5IJ48 1285 aa13.01□□□□□ -0.33
TMEM258-203ENST00000535297 ISLR2Q6UXK2 745 aa13.01□□□□□ -0.33
TMEM258-203ENST00000535297 LANCL3Q6ZV70 420 aa13.01□□□□□ -0.33
TMEM258-203ENST00000535297 VN1R5Q7Z5H4 357 aa13.01□□□□□ -0.33
TMEM258-203ENST00000535297 ANKRD37Q7Z713 158 aa13.01□□□□□ -0.33
TMEM258-203ENST00000535297 SHISA5Q8N114 240 aa13.01□□□□□ -0.33
TMEM258-203ENST00000535297 UHMK1Q8TAS1 419 aaKnown RBP13.01□□□□□ -0.33
TMEM258-203ENST00000535297 CCT6BQ92526 530 aa13.01□□□□□ -0.33
TMEM258-203ENST00000535297 MS4A6EQ96DS6 147 aa13.01□□□□□ -0.33
TMEM258-203ENST00000535297 FAR2Q96K12 515 aa13.01□□□□□ -0.33
TMEM258-203ENST00000535297 IMMP1LQ96LU5 166 aa13.01□□□□□ -0.33
TMEM258-203ENST00000535297 WDR77Q9BQA1 342 aaPredicted RBP13.01□□□□□ -0.33
TMEM258-203ENST00000535297 AICDAQ9GZX7 198 aa13.01□□□□□ -0.33
TMEM258-203ENST00000535297 SLAMF7Q9NQ25 335 aa13.01□□□□□ -0.33
TMEM258-203ENST00000535297 B3GNT3Q9Y2A9 372 aa13.01□□□□□ -0.33
TMEM258-203ENST00000535297 SPENQ96T58 3664 aaKnown RBP13□□□□□ -0.33
TMEM258-203ENST00000535297 CPAMD8Q8IZJ3 1885 aa13□□□□□ -0.33
TMEM258-203ENST00000535297 TRIM49D1C9J1S8 452 aa13□□□□□ -0.33
TMEM258-203ENST00000535297 PSMD12O00232 456 aaPredicted RBP13□□□□□ -0.33
TMEM258-203ENST00000535297 RIPK2O43353 540 aa13□□□□□ -0.33
TMEM258-203ENST00000535297 ERI3O43414 337 aaKnown RBP13□□□□□ -0.33
TMEM258-203ENST00000535297 CDC123O75794 336 aaPredicted RBP13□□□□□ -0.33
TMEM258-203ENST00000535297 WFS1O76024 890 aa13□□□□□ -0.33
TMEM258-203ENST00000535297 SNRPAP09012 282 aaKnown RBP13□□□□□ -0.33
TMEM258-203ENST00000535297 RBP1P09455 135 aa13□□□□□ -0.33
TMEM258-203ENST00000535297 COL6A2P12110 1019 aa13□□□□□ -0.33
TMEM258-203ENST00000535297 RNH1P13489 461 aaKnown RBP13□□□□□ -0.33
TMEM258-203ENST00000535297 EPB42P16452 691 aa13□□□□□ -0.33
TMEM258-203ENST00000535297 HNRNPH1P31943 449 aaKnown RBP13□□□□□ -0.33
TMEM258-203ENST00000535297 MFAP5Q13361 173 aa13□□□□□ -0.33
TMEM258-203ENST00000535297 ABRAXAS2Q15018 415 aa13□□□□□ -0.33
TMEM258-203ENST00000535297 PCBP2Q15366 365 aaKnown RBP eCLIP13□□□□□ -0.33
TMEM258-203ENST00000535297 PFKFB4Q16877 469 aa13□□□□□ -0.33
TMEM258-203ENST00000535297 LGSNQ5TDP6 509 aa13□□□□□ -0.33
TMEM258-203ENST00000535297 METTL2BQ6P1Q9 378 aaKnown RBP13□□□□□ -0.33
TMEM258-203ENST00000535297 TRIM40Q6P9F5 258 aa13□□□□□ -0.33
TMEM258-203ENST00000535297 QSOX2Q6ZRP7 698 aa13□□□□□ -0.33
TMEM258-203ENST00000535297 Q6ZS92 163 aa13□□□□□ -0.33
TMEM258-203ENST00000535297 ATCAYQ86WG3 371 aa13□□□□□ -0.33
TMEM258-203ENST00000535297 CNPY4Q8N129 248 aa13□□□□□ -0.33
TMEM258-203ENST00000535297 EFCAB3Q8N7B9 438 aa13□□□□□ -0.33
TMEM258-203ENST00000535297 EIF1ADQ8N9N8 165 aaKnown RBP13□□□□□ -0.33
TMEM258-203ENST00000535297 LRRN4CLQ8ND94 238 aa13□□□□□ -0.33
TMEM258-203ENST00000535297 OR2L5Q8NG80 312 aa13□□□□□ -0.33
TMEM258-203ENST00000535297 CPT1CQ8TCG5 803 aa13□□□□□ -0.33
TMEM258-203ENST00000535297 BRIX1Q8TDN6 353 aaKnown RBP13□□□□□ -0.33
TMEM258-203ENST00000535297 ADAMTS18Q8TE60 1221 aa13□□□□□ -0.33
TMEM258-203ENST00000535297 LMF1Q96S06 567 aa13□□□□□ -0.33
TMEM258-203ENST00000535297 NPLQ9BXD5 320 aaPredicted RBP13□□□□□ -0.33
TMEM258-203ENST00000535297 TXLNGYQ9BZA5 131 aa13□□□□□ -0.33
TMEM258-203ENST00000535297 REXO4Q9GZR2 422 aaKnown RBP13□□□□□ -0.33
TMEM258-203ENST00000535297 ILKAPQ9H0C8 392 aaPredicted RBP13□□□□□ -0.33
TMEM258-203ENST00000535297 ZBTB20Q9HC78 741 aaPredicted RBP13□□□□□ -0.33
TMEM258-203ENST00000535297 CPSF2Q9P2I0 782 aaKnown RBP13□□□□□ -0.33
TMEM258-203ENST00000535297 ZNF490Q9ULM2 529 aaPredicted RBP13□□□□□ -0.33
TMEM258-203ENST00000535297 TMCO1Q9UM00 188 aa13□□□□□ -0.33
TMEM258-203ENST00000535297 TNPO3Q9Y5L0 923 aaKnown RBP13□□□□□ -0.33
TMEM258-203ENST00000535297 SCN2AQ99250 2005 aa13□□□□□ -0.33
TMEM258-203ENST00000535297 RP1L1Q8IWN7 2480 aaPredicted RBP12.99□□□□□ -0.33
TMEM258-203ENST00000535297 SHANK1Q9Y566 2161 aa12.99□□□□□ -0.33
TMEM258-203ENST00000535297 DNAJB6O75190 326 aa12.99□□□□□ -0.33
TMEM258-203ENST00000535297 SEC24DO94855 1032 aaPredicted RBP12.99□□□□□ -0.33
TMEM258-203ENST00000535297 TBX6O95947 436 aaPredicted RBP12.99□□□□□ -0.33
TMEM258-203ENST00000535297 PIK3CGP48736 1102 aa12.99□□□□□ -0.33
TMEM258-203ENST00000535297 BTN3A2P78410 334 aa12.99□□□□□ -0.33
TMEM258-203ENST00000535297 TGM3Q08188 693 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms