RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 SEMA6CQ9H3T2 930 aa11.78□□□□□ -0.52
SCARB1-204ENST00000535005 SLC6A20Q9NP91 592 aa11.78□□□□□ -0.52
SCARB1-204ENST00000535005 C1GALT1Q9NS00 363 aa11.78□□□□□ -0.52
SCARB1-204ENST00000535005 ZNF225Q9UK10 706 aa11.78□□□□□ -0.52
SCARB1-204ENST00000535005 PCDHGA1Q9Y5H4 931 aa11.78□□□□□ -0.52
SCARB1-204ENST00000535005 RP1P56715 2156 aa11.78□□□□□ -0.52
SCARB1-204ENST00000535005 PCM1Q15154 2024 aa11.78□□□□□ -0.52
SCARB1-204ENST00000535005 A0A087WXM4 84 aa11.77□□□□□ -0.52
SCARB1-204ENST00000535005 LOC100653049A0A140TA62 436 aa11.77□□□□□ -0.52
SCARB1-204ENST00000535005 TLCD2A6NGC4 264 aa11.77□□□□□ -0.52
SCARB1-204ENST00000535005 TM4SF5O14894 197 aa11.77□□□□□ -0.52
SCARB1-204ENST00000535005 TOX3O15405 576 aaPredicted RBP11.77□□□□□ -0.52
SCARB1-204ENST00000535005 GFRA3O60609 400 aa11.77□□□□□ -0.52
SCARB1-204ENST00000535005 KRT34O76011 436 aa11.77□□□□□ -0.52
SCARB1-204ENST00000535005 SORBS2O94875 1100 aaKnown RBP11.77□□□□□ -0.52
SCARB1-204ENST00000535005 CLDN9O95484 217 aa11.77□□□□□ -0.52
SCARB1-204ENST00000535005 RPLP0P05388 317 aaKnown RBP11.77□□□□□ -0.52
SCARB1-204ENST00000535005 CDH1P12830 882 aa11.77□□□□□ -0.52
SCARB1-204ENST00000535005 CSRP1P21291 193 aaKnown RBP11.77□□□□□ -0.52
SCARB1-204ENST00000535005 PCSK6P29122 969 aa11.77□□□□□ -0.52
SCARB1-204ENST00000535005 HMOX2P30519 316 aa11.77□□□□□ -0.52
SCARB1-204ENST00000535005 CSF2RBP32927 897 aa11.77□□□□□ -0.52
SCARB1-204ENST00000535005 HNF4AP41235 474 aa11.77□□□□□ -0.52
SCARB1-204ENST00000535005 GRIA3P42263 894 aa11.77□□□□□ -0.52
SCARB1-204ENST00000535005 LSSP48449 732 aa11.77□□□□□ -0.52
SCARB1-204ENST00000535005 CCR8P51685 355 aa11.77□□□□□ -0.52
SCARB1-204ENST00000535005 ERVPABLB-1P60509 514 aa11.77□□□□□ -0.52
SCARB1-204ENST00000535005 PPP1CAP62136 330 aa11.77□□□□□ -0.52
SCARB1-204ENST00000535005 CSNK1G2P78368 415 aa11.77□□□□□ -0.52
SCARB1-204ENST00000535005 LAPTM5Q13571 262 aa11.77□□□□□ -0.52
SCARB1-204ENST00000535005 RBBP7Q16576 425 aa11.77□□□□□ -0.52
SCARB1-204ENST00000535005 ZBED5Q49AG3 693 aa11.77□□□□□ -0.52
SCARB1-204ENST00000535005 XKR6Q5GH73 641 aa11.77□□□□□ -0.52
SCARB1-204ENST00000535005 CATSPEREQ5SY80 951 aa11.77□□□□□ -0.52
SCARB1-204ENST00000535005 C6orf52Q5T4I8 152 aa11.77□□□□□ -0.52
SCARB1-204ENST00000535005 TMEM71Q6P5X7 295 aa11.77□□□□□ -0.52
SCARB1-204ENST00000535005 USP53Q70EK8 1073 aa11.77□□□□□ -0.52
SCARB1-204ENST00000535005 SYVN1Q86TM6 617 aa11.77□□□□□ -0.52
SCARB1-204ENST00000535005 CUZD1Q86UP6 607 aa11.77□□□□□ -0.52
SCARB1-204ENST00000535005 BHLHE22Q8NFJ8 381 aaPredicted RBP11.77□□□□□ -0.52
SCARB1-204ENST00000535005 OR4F6Q8NGB9 312 aa11.77□□□□□ -0.52
SCARB1-204ENST00000535005 PKP2Q99959 881 aa11.77□□□□□ -0.52
SCARB1-204ENST00000535005 DPH7Q9BTV6 452 aa11.77□□□□□ -0.52
SCARB1-204ENST00000535005 SARGQ9BW04 601 aa11.77□□□□□ -0.52
SCARB1-204ENST00000535005 CHRNA10Q9GZZ6 450 aa11.77□□□□□ -0.52
SCARB1-204ENST00000535005 NT5DC2Q9H857 520 aa11.77□□□□□ -0.52
SCARB1-204ENST00000535005 ACTR8Q9H981 624 aa11.77□□□□□ -0.52
SCARB1-204ENST00000535005 COPS7BQ9H9Q2 264 aaPredicted RBP11.77□□□□□ -0.52
SCARB1-204ENST00000535005 WDR41Q9HAD4 459 aa11.77□□□□□ -0.52
SCARB1-204ENST00000535005 CLK4Q9HAZ1 481 aaKnown RBP11.77□□□□□ -0.52
SCARB1-204ENST00000535005 MID1IP1Q9NPA3 183 aa11.77□□□□□ -0.52
SCARB1-204ENST00000535005 CUEDC1Q9NWM3 386 aaPredicted RBP11.77□□□□□ -0.52
SCARB1-204ENST00000535005 TRPS1Q9UHF7 1281 aa11.77□□□□□ -0.52
SCARB1-204ENST00000535005 PTPRZ1P23471 2315 aaPredicted RBP11.77□□□□□ -0.53
SCARB1-204ENST00000535005 KCNE1BA0A087WTH5 132 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 A0A1B0GTL3 188 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 OR2A25A4D2G3 310 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 H3BSA7 217 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 H7BY64 318 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 AIM2O14862 343 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 GIPC1O14908 333 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 JUPP14923 745 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 CXCR2P25025 360 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 E2F1Q01094 437 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 ART3Q13508 389 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 PAGE2BQ5JRK9 111 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 GRHL2Q6ISB3 625 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 LETMD1Q6P1Q0 360 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 PRSS42Q7Z5A4 293 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 AMIGO2Q86SJ2 522 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 TMPRSS11BQ86T26 416 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 PAQR7Q86WK9 346 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 LILRA2Q8N149 483 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 OR4D9Q8NGE8 314 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 EME1Q96AY2 570 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 PRAP1Q96NZ9 151 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 TGM7Q96PF1 710 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 SLC29A3Q9BZD2 475 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 RNF11Q9Y3C5 154 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 AP4S1Q9Y587 144 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 KLHL41O60662 606 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 OR4F21O95013 312 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 HOXB3P14651 431 aaPredicted RBP11.76□□□□□ -0.53
SCARB1-204ENST00000535005 CD22P20273 847 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 CDH3P22223 829 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 VARSP26640 1264 aaKnown RBP11.76□□□□□ -0.53
SCARB1-204ENST00000535005 RPL14P50914 215 aaKnown RBP11.76□□□□□ -0.53
SCARB1-204ENST00000535005 GFERP55789 205 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 REEP5Q00765 189 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 CEACAM7Q14002 265 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 TRIP6Q15654 476 aaKnown RBP11.76□□□□□ -0.53
SCARB1-204ENST00000535005 SLC9B1Q4ZJI4 515 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 FCRL6Q6DN72 434 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 KRT80Q6KB66 452 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 FIGLAQ6QHK4 219 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 ZNF574Q6ZN55 896 aaPredicted RBP11.76□□□□□ -0.53
SCARB1-204ENST00000535005 GPR141Q7Z602 305 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 FAM20CQ8IXL6 584 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 CLYBLQ8N0X4 340 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 ZNF781Q8N8C0 355 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms