RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 POU4F1Q01851 419 aa9.05□□□□□ -0.96
SSBP3-215ENST00000533946 CDC16Q13042 620 aa9.05□□□□□ -0.96
SSBP3-215ENST00000533946 CALCOCO2Q13137 446 aa9.05□□□□□ -0.96
SSBP3-215ENST00000533946 ZNF169Q14929 603 aaPredicted RBP9.05□□□□□ -0.96
SSBP3-215ENST00000533946 SLMAPQ14BN4 828 aa9.05□□□□□ -0.96
SSBP3-215ENST00000533946 ABRAXAS2Q15018 415 aa9.05□□□□□ -0.96
SSBP3-215ENST00000533946 BTBD16Q32M84 506 aa9.05□□□□□ -0.96
SSBP3-215ENST00000533946 LRRC8EQ6NSJ5 796 aa9.05□□□□□ -0.96
SSBP3-215ENST00000533946 ZNF793Q6ZN11 406 aa9.05□□□□□ -0.96
SSBP3-215ENST00000533946 CRLF3Q8IUI8 442 aa9.05□□□□□ -0.96
SSBP3-215ENST00000533946 CYP4X1Q8N118 509 aa9.05□□□□□ -0.96
SSBP3-215ENST00000533946 BEST3Q8N1M1 668 aa9.05□□□□□ -0.96
SSBP3-215ENST00000533946 FAM26EQ8N5C1 309 aa9.05□□□□□ -0.96
SSBP3-215ENST00000533946 EFCAB3Q8N7B9 438 aa9.05□□□□□ -0.96
SSBP3-215ENST00000533946 ZNF321PQ8N8H1 164 aa9.05□□□□□ -0.96
SSBP3-215ENST00000533946 NFAM1Q8NET5 270 aaPredicted RBP9.05□□□□□ -0.96
SSBP3-215ENST00000533946 ANP32BQ92688 251 aaKnown RBP9.05□□□□□ -0.96
SSBP3-215ENST00000533946 MS4A6EQ96DS6 147 aa9.05□□□□□ -0.96
SSBP3-215ENST00000533946 TSPAN10Q9H1Z9 355 aaPredicted RBP9.05□□□□□ -0.96
SSBP3-215ENST00000533946 PELI2Q9HAT8 420 aa9.05□□□□□ -0.96
SSBP3-215ENST00000533946 VPS4AQ9UN37 437 aa9.05□□□□□ -0.96
SSBP3-215ENST00000533946 DYRK1BQ9Y463 629 aa9.05□□□□□ -0.96
SSBP3-215ENST00000533946 SLC22A7Q9Y694 548 aa9.05□□□□□ -0.96
SSBP3-215ENST00000533946 PCNX1Q96RV3 2341 aa9.05□□□□□ -0.96
SSBP3-215ENST00000533946 ADGRG4Q8IZF6 3080 aa9.05□□□□□ -0.96
SSBP3-215ENST00000533946 CSMD2Q7Z408 3487 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 A0A1W2PS29 197 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 LRIT2A6NDA9 550 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 PPP6CO00743 305 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 EIF3HO15372 352 aaKnown RBP eCLIP9.04□□□□□ -0.96
SSBP3-215ENST00000533946 CCNT2O60583 730 aaKnown RBP9.04□□□□□ -0.96
SSBP3-215ENST00000533946 SIX3O95343 332 aaPredicted RBP9.04□□□□□ -0.96
SSBP3-215ENST00000533946 ACSL3O95573 720 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 C2P06681 752 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 FAM153BP0C7A2 387 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 STMN1P16949 149 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 HRH2P25021 359 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 CERS1P27544 350 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 GCAP28676 217 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 GGT5P36269 586 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 PIK3CGP48736 1102 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 TDGF1P3P51864 188 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 PLA2G16P53816 162 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 CDKL1Q00532 357 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 ID2Q02363 134 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 ZNF33BQ06732 778 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 PWP1Q13610 501 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 NSDHLQ15738 373 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 UAP1Q16222 522 aaPredicted RBP9.04□□□□□ -0.96
SSBP3-215ENST00000533946 NDUFA9Q16795 377 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 FAM153CQ494X1 144 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 RNFT1Q5M7Z0 435 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 ZNF324BQ6AW86 544 aaPredicted RBP9.04□□□□□ -0.96
SSBP3-215ENST00000533946 SPINK14Q6IE38 97 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 PAPD4Q6PIY7 484 aaKnown RBP9.04□□□□□ -0.96
SSBP3-215ENST00000533946 DGAT2L6Q6ZPD8 337 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 NCCRP1Q6ZVX7 275 aaPredicted RBP9.04□□□□□ -0.96
SSBP3-215ENST00000533946 FRA10AC1Q70Z53 315 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 CYS1Q717R9 158 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 CLNKQ7Z7G1 428 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 ATCAYQ86WG3 371 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 GSPT2Q8IYD1 628 aaKnown RBP9.04□□□□□ -0.96
SSBP3-215ENST00000533946 IQCKQ8N0W5 287 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 SNX31Q8N9S9 440 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 PLPP5Q8NEB5 264 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 PPP4R1Q8TF05 950 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 THAP3Q8WTV1 239 aaPredicted RBP9.04□□□□□ -0.96
SSBP3-215ENST00000533946 IFT81Q8WYA0 676 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 CCT6BQ92526 530 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 KIAA1191Q96A73 305 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 TBC1D20Q96BZ9 403 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 THAP11Q96EK4 314 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 PTCHD1Q96NR3 888 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 TRIM54Q9BYV2 358 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 PRDM7Q9NQW5 492 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 SNX15Q9NRS6 342 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 C14orf105Q9NVL8 296 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 STMN3Q9NZ72 180 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 WWOXQ9NZC7 414 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 CD274Q9NZQ7 290 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 UTP11Q9Y3A2 253 aaKnown RBP9.04□□□□□ -0.96
SSBP3-215ENST00000533946 CACNA1DQ01668 2161 aa9.04□□□□□ -0.96
SSBP3-215ENST00000533946 NOTCH2Q04721 2471 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 IGKV3D-11A0A0A0MRZ8 115 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 ANKUB1A6NFN9 424 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 TXNDC9O14530 226 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 ERI3O43414 337 aaKnown RBP9.03□□□□□ -0.96
SSBP3-215ENST00000533946 ZNF354AO60765 605 aaPredicted RBP9.03□□□□□ -0.96
SSBP3-215ENST00000533946 WFS1O76024 890 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 AGFG2O95081 481 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 ETHE1O95571 254 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 ALPPP05187 535 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 SBK3P0C264 359 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 SLC35G6P0C7Q6 338 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 CCND1P24385 295 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 CXCR2P25025 360 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 AHRP35869 848 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 CD96P40200 585 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 SLC12A2P55011 1212 aa9.03□□□□□ -0.96
SSBP3-215ENST00000533946 OR4D2P58180 307 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms