RNA–Protein interactions for RNA: ENST00000533778.6

CHEK1-215, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-215ENST00000533778 NAGLUP54802 743 aa18.78■□□□□ 0.6
CHEK1-215ENST00000533778 PKNOX1P55347 436 aa18.78■□□□□ 0.6
CHEK1-215ENST00000533778 RHDQ02161 417 aa18.78■□□□□ 0.6
CHEK1-215ENST00000533778 IFT88Q13099 833 aa18.78■□□□□ 0.6
CHEK1-215ENST00000533778 GPRIN3Q6ZVF9 776 aa18.78■□□□□ 0.6
CHEK1-215ENST00000533778 PRSS41Q7RTY9 318 aa18.78■□□□□ 0.6
CHEK1-215ENST00000533778 HDXQ7Z353 690 aa18.78■□□□□ 0.6
CHEK1-215ENST00000533778 PDSS2Q86YH6 399 aa18.78■□□□□ 0.6
CHEK1-215ENST00000533778 VPS50Q96JG6 964 aa18.78■□□□□ 0.6
CHEK1-215ENST00000533778 ELOVL6Q9H5J4 265 aa18.78■□□□□ 0.6
CHEK1-215ENST00000533778 TRPS1Q9UHF7 1281 aa18.78■□□□□ 0.6
CHEK1-215ENST00000533778 SNX6Q9UNH7 406 aa18.78■□□□□ 0.6
CHEK1-215ENST00000533778 POLHQ9Y253 713 aa18.78■□□□□ 0.6
CHEK1-215ENST00000533778 ANKRD11Q6UB99 2663 aaPredicted RBP18.78■□□□□ 0.6
CHEK1-215ENST00000533778 HEATR5BQ9P2D3 2071 aa18.78■□□□□ 0.6
CHEK1-215ENST00000533778 TRIM13O60858 407 aa18.77■□□□□ 0.6
CHEK1-215ENST00000533778 CNOT3O75175 753 aaKnown RBP18.77■□□□□ 0.6
CHEK1-215ENST00000533778 RDH16O75452 317 aa18.77■□□□□ 0.6
CHEK1-215ENST00000533778 H2AFXP16104 143 aaPredicted RBP18.77■□□□□ 0.6
CHEK1-215ENST00000533778 TSPAN8P19075 237 aa18.77■□□□□ 0.6
CHEK1-215ENST00000533778 HNRNPH1P31943 449 aaKnown RBP18.77■□□□□ 0.6
CHEK1-215ENST00000533778 BTN3A2P78410 334 aa18.77■□□□□ 0.6
CHEK1-215ENST00000533778 DDX39BQ13838 428 aaKnown RBP18.77■□□□□ 0.6
CHEK1-215ENST00000533778 FRG2Q64ET8 278 aa18.77■□□□□ 0.6
CHEK1-215ENST00000533778 ADNP2Q6IQ32 1131 aa18.77■□□□□ 0.6
CHEK1-215ENST00000533778 RPS27LQ71UM5 84 aaKnown RBP18.77■□□□□ 0.6
CHEK1-215ENST00000533778 C10orf107Q8IVU9 208 aa18.77■□□□□ 0.6
CHEK1-215ENST00000533778 OR51Q1Q8NH59 317 aa18.77■□□□□ 0.6
CHEK1-215ENST00000533778 CRELD1Q96HD1 420 aa18.77■□□□□ 0.6
CHEK1-215ENST00000533778 KCNC2Q96PR1 638 aa18.77■□□□□ 0.6
CHEK1-215ENST00000533778 FRG2BQ96QU4 278 aa18.77■□□□□ 0.6
CHEK1-215ENST00000533778 SPSB2Q99619 263 aa18.77■□□□□ 0.6
CHEK1-215ENST00000533778 NPLQ9BXD5 320 aaPredicted RBP18.77■□□□□ 0.6
CHEK1-215ENST00000533778 MS4A8Q9BY19 250 aa18.77■□□□□ 0.6
CHEK1-215ENST00000533778 SOX17Q9H6I2 414 aaPredicted RBP18.77■□□□□ 0.6
CHEK1-215ENST00000533778 DMRT3Q9NQL9 472 aa18.77■□□□□ 0.6
CHEK1-215ENST00000533778 SEMA3GQ9NS98 782 aa18.77■□□□□ 0.6
CHEK1-215ENST00000533778 SLC17A7Q9P2U7 560 aa18.77■□□□□ 0.6
CHEK1-215ENST00000533778 SPTBP11277 2137 aa18.76■□□□□ 0.59
CHEK1-215ENST00000533778 TM9SF1O15321 606 aa18.76■□□□□ 0.59
CHEK1-215ENST00000533778 TGFB1P01137 390 aa18.76■□□□□ 0.59
CHEK1-215ENST00000533778 ENO1P06733 434 aaKnown RBP18.76■□□□□ 0.59
CHEK1-215ENST00000533778 CREB1P16220 341 aa18.76■□□□□ 0.59
CHEK1-215ENST00000533778 ARFIP1P53367 373 aa18.76■□□□□ 0.59
CHEK1-215ENST00000533778 PLA2G16P53816 162 aa18.76■□□□□ 0.59
CHEK1-215ENST00000533778 SNRPNP63162 240 aaKnown RBP18.76■□□□□ 0.59
CHEK1-215ENST00000533778 MAT1AQ00266 395 aaKnown RBP18.76■□□□□ 0.59
CHEK1-215ENST00000533778 IL10RAQ13651 578 aa18.76■□□□□ 0.59
CHEK1-215ENST00000533778 PCLAFQ15004 111 aa18.76■□□□□ 0.59
CHEK1-215ENST00000533778 VWA2Q5GFL6 755 aa18.76■□□□□ 0.59
CHEK1-215ENST00000533778 DEPDC1Q5TB30 811 aa18.76■□□□□ 0.59
CHEK1-215ENST00000533778 KHDRBS2Q5VWX1 349 aaKnown RBP18.76■□□□□ 0.59
CHEK1-215ENST00000533778 ABHD17CQ6PCB6 329 aa18.76■□□□□ 0.59
CHEK1-215ENST00000533778 HOMEZQ8IX15 550 aa18.76■□□□□ 0.59
CHEK1-215ENST00000533778 WDR20Q8TBZ3 569 aa18.76■□□□□ 0.59
CHEK1-215ENST00000533778 OR1F2PQ96R84 312 aa18.76■□□□□ 0.59
CHEK1-215ENST00000533778 F2RL3Q96RI0 385 aa18.76■□□□□ 0.59
CHEK1-215ENST00000533778 MTERF1Q99551 399 aaKnown RBP18.76■□□□□ 0.59
CHEK1-215ENST00000533778 TBCDQ9BTW9 1192 aa18.76■□□□□ 0.59
CHEK1-215ENST00000533778 CRB3Q9BUF7 120 aa18.76■□□□□ 0.59
CHEK1-215ENST00000533778 SLC29A3Q9BZD2 475 aa18.76■□□□□ 0.59
CHEK1-215ENST00000533778 GSTO2Q9H4Y5 243 aa18.76■□□□□ 0.59
CHEK1-215ENST00000533778 COPS7BQ9H9Q2 264 aaPredicted RBP18.76■□□□□ 0.59
CHEK1-215ENST00000533778 HCN3Q9P1Z3 774 aa18.76■□□□□ 0.59
CHEK1-215ENST00000533778 PPT2Q9UMR5 302 aa18.76■□□□□ 0.59
CHEK1-215ENST00000533778 LHX6Q9UPM6 363 aa18.76■□□□□ 0.59
CHEK1-215ENST00000533778 PEX12O00623 359 aa18.75■□□□□ 0.59
CHEK1-215ENST00000533778 PPP6CO00743 305 aa18.75■□□□□ 0.59
CHEK1-215ENST00000533778 PCDH17O14917 1159 aa18.75■□□□□ 0.59
CHEK1-215ENST00000533778 B3GALT2O43825 422 aa18.75■□□□□ 0.59
CHEK1-215ENST00000533778 BMP10O95393 424 aa18.75■□□□□ 0.59
CHEK1-215ENST00000533778 ESRRBO95718 433 aa18.75■□□□□ 0.59
CHEK1-215ENST00000533778 TBX6O95947 436 aaPredicted RBP18.75■□□□□ 0.59
CHEK1-215ENST00000533778 KRT6AP02538 564 aa18.75■□□□□ 0.59
CHEK1-215ENST00000533778 KRT6BP04259 564 aa18.75■□□□□ 0.59
CHEK1-215ENST00000533778 UMODP07911 640 aa18.75■□□□□ 0.59
CHEK1-215ENST00000533778 CYC1P08574 325 aa18.75■□□□□ 0.59
CHEK1-215ENST00000533778 MMP11P24347 488 aa18.75■□□□□ 0.59
CHEK1-215ENST00000533778 OTX2P32243 289 aa18.75■□□□□ 0.59
CHEK1-215ENST00000533778 TSFMP43897 325 aaKnown RBP18.75■□□□□ 0.59
CHEK1-215ENST00000533778 XCR1P46094 333 aa18.75■□□□□ 0.59
CHEK1-215ENST00000533778 KRT6CP48668 564 aa18.75■□□□□ 0.59
CHEK1-215ENST00000533778 RAP1GDS1P52306 607 aa18.75■□□□□ 0.59
CHEK1-215ENST00000533778 MTTPP55157 894 aa18.75■□□□□ 0.59
CHEK1-215ENST00000533778 KLC1Q07866 573 aa18.75■□□□□ 0.59
CHEK1-215ENST00000533778 CUL3Q13618 768 aa18.75■□□□□ 0.59
CHEK1-215ENST00000533778 SYT16Q17RD7 645 aa18.75■□□□□ 0.59
CHEK1-215ENST00000533778 LETMD1Q6P1Q0 360 aa18.75■□□□□ 0.59
CHEK1-215ENST00000533778 BORAQ6PGQ7 559 aa18.75■□□□□ 0.59
CHEK1-215ENST00000533778 FRMD7Q6ZUT3 714 aa18.75■□□□□ 0.59
CHEK1-215ENST00000533778 ADAMTS17Q8TE56 1095 aa18.75■□□□□ 0.59
CHEK1-215ENST00000533778 RGMAQ96B86 450 aa18.75■□□□□ 0.59
CHEK1-215ENST00000533778 CNDP1Q96KN2 507 aa18.75■□□□□ 0.59
CHEK1-215ENST00000533778 SERINC2Q96SA4 455 aa18.75■□□□□ 0.59
CHEK1-215ENST00000533778 SERPINI1Q99574 410 aa18.75■□□□□ 0.59
CHEK1-215ENST00000533778 TRMOQ9BU70 441 aa18.75■□□□□ 0.59
CHEK1-215ENST00000533778 TMBIM4Q9HC24 238 aa18.75■□□□□ 0.59
CHEK1-215ENST00000533778 KCNK9Q9NPC2 374 aa18.75■□□□□ 0.59
CHEK1-215ENST00000533778 ACSS2Q9NR19 701 aa18.75■□□□□ 0.59
CHEK1-215ENST00000533778 C3orf18Q9UK00 162 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms