RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 ADAM30Q9UKF2 790 aa11.82□□□□□ -0.52
BDNF-218ENST00000533246 ACSL6Q9UKU0 697 aa11.82□□□□□ -0.52
BDNF-218ENST00000533246 IQCMA0A1B0GVH7 501 aa11.82□□□□□ -0.52
BDNF-218ENST00000533246 URADA6NGE7 173 aa11.82□□□□□ -0.52
BDNF-218ENST00000533246 SAGE2PA6NJ88 616 aa11.82□□□□□ -0.52
BDNF-218ENST00000533246 EFCAB9A8MZ26 197 aa11.82□□□□□ -0.52
BDNF-218ENST00000533246 RHOP08100 348 aa11.82□□□□□ -0.52
BDNF-218ENST00000533246 HNMTP50135 292 aa11.82□□□□□ -0.52
BDNF-218ENST00000533246 RNF144AP50876 292 aaPredicted RBP11.82□□□□□ -0.52
BDNF-218ENST00000533246 RPS26P62854 115 aaKnown RBP11.82□□□□□ -0.52
BDNF-218ENST00000533246 CRB2Q5IJ48 1285 aa11.82□□□□□ -0.52
BDNF-218ENST00000533246 CST9Q5W186 159 aa11.82□□□□□ -0.52
BDNF-218ENST00000533246 VTCN1Q7Z7D3 282 aa11.82□□□□□ -0.52
BDNF-218ENST00000533246 FAM109AQ8N4B1 249 aa11.82□□□□□ -0.52
BDNF-218ENST00000533246 GALNT11Q8NCW6 608 aa11.82□□□□□ -0.52
BDNF-218ENST00000533246 MDGA1Q8NFP4 955 aa11.82□□□□□ -0.52
BDNF-218ENST00000533246 ZBED6CLQ96FA7 236 aaPredicted RBP11.82□□□□□ -0.52
BDNF-218ENST00000533246 WDR26Q9H7D7 661 aa11.82□□□□□ -0.52
BDNF-218ENST00000533246 CCM2LQ9NUG4 571 aaPredicted RBP11.82□□□□□ -0.52
BDNF-218ENST00000533246 HCFC1R1Q9NWW0 138 aa11.82□□□□□ -0.52
BDNF-218ENST00000533246 ZNF282Q9UDV7 671 aaPredicted RBP11.82□□□□□ -0.52
BDNF-218ENST00000533246 OR6C70A6NIJ9 312 aa11.82□□□□□ -0.52
BDNF-218ENST00000533246 TNFRSF10BO14763 440 aa11.82□□□□□ -0.52
BDNF-218ENST00000533246 CLPXO76031 633 aa11.82□□□□□ -0.52
BDNF-218ENST00000533246 GLULP15104 373 aa11.82□□□□□ -0.52
BDNF-218ENST00000533246 TNFRSF1BP20333 461 aa11.82□□□□□ -0.52
BDNF-218ENST00000533246 KELP23276 732 aa11.82□□□□□ -0.52
BDNF-218ENST00000533246 VIPR1P32241 457 aa11.82□□□□□ -0.52
BDNF-218ENST00000533246 DBPQ10586 325 aaPredicted RBP11.82□□□□□ -0.52
BDNF-218ENST00000533246 ILF3Q12906 894 aaKnown RBP eCLIP11.82□□□□□ -0.52
BDNF-218ENST00000533246 LASP1Q14847 261 aaKnown RBP11.82□□□□□ -0.52
BDNF-218ENST00000533246 DUOXA1Q1HG43 343 aa11.82□□□□□ -0.52
BDNF-218ENST00000533246 PYHIN1Q6K0P9 492 aa11.82□□□□□ -0.52
BDNF-218ENST00000533246 FAM98AQ8NCA5 519 aaKnown RBP11.82□□□□□ -0.52
BDNF-218ENST00000533246 OR4E2Q8NGC2 313 aa11.82□□□□□ -0.52
BDNF-218ENST00000533246 RAB2BQ8WUD1 216 aa11.82□□□□□ -0.52
BDNF-218ENST00000533246 CARNS1A5YM72 827 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 A8MUA0 341 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 STX11O75558 287 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 C9P02748 559 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 SLC10A3P09131 477 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 GPR68Q15743 365 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 TIGD6Q17RP2 521 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 DPY19L1Q2PZI1 675 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 COLEC12Q5KU26 742 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 ALG1LQ6GMV1 187 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 KIAA1161Q6NSJ0 714 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 MRPL10Q7Z7H8 261 aaKnown RBP11.81□□□□□ -0.52
BDNF-218ENST00000533246 CLECL1Q8IZS7 167 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 ZNF655Q8N720 491 aaPredicted RBP11.81□□□□□ -0.52
BDNF-218ENST00000533246 CHPT1Q8WUD6 406 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 ST8SIA2Q92186 375 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 MAL2Q969L2 176 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 METTL2AQ96IZ6 378 aaKnown RBP11.81□□□□□ -0.52
BDNF-218ENST00000533246 MTRRQ9UBK8 725 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 PCDHGA7Q9Y5G6 932 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 B4GAT1O43505 415 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 S100A6P06703 90 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 CD247P20963 164 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 CFL1P23528 166 aaKnown RBP11.81□□□□□ -0.52
BDNF-218ENST00000533246 CTSOP43234 321 aaPredicted RBP11.81□□□□□ -0.52
BDNF-218ENST00000533246 ALDH3A2P51648 485 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 ZMYND11Q15326 602 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 ENPP6Q6UWR7 440 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 RNF130Q86XS8 419 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.81□□□□□ -0.52
BDNF-218ENST00000533246 ATP6V1C2Q8NEY4 427 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 SHKBP1Q8TBC3 707 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 TTLL2Q9BWV7 592 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 SRMSQ9H3Y6 488 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 PCTPQ9UKL6 214 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 SCO1O75880 301 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 DNAJA1P31689 397 aaKnown RBP11.81□□□□□ -0.52
BDNF-218ENST00000533246 GRIA2P42262 883 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 KCNC1P48547 511 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 ETV1P50549 477 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 CD83Q01151 205 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 GALNT1Q10472 559 aaPredicted RBP11.81□□□□□ -0.52
BDNF-218ENST00000533246 GPM6BQ13491 265 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 DOC2AQ14183 400 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 TSC22D1Q15714 1073 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 SNX29P2Q8IUI4 249 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 SLC35G5Q96KT7 338 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 C17orf62Q9BQA9 187 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 FBXL12Q9NXK8 326 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 IL17CQ9P0M4 197 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 RIMKLBQ9ULI2 386 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 ERVW-1Q9UQF0 538 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 CFL2Q9Y281 166 aa11.81□□□□□ -0.52
BDNF-218ENST00000533246 CCNDBP1O95273 360 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 HIST1H2ABP04908 130 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 CPN2P22792 545 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 CLCN4P51793 760 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 PGDP52209 483 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 VBP1P61758 197 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 PDGFRLQ15198 375 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 CRTC2Q53ET0 693 aaPredicted RBP11.8□□□□□ -0.52
BDNF-218ENST00000533246 FAM205BPQ63HN1 556 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 HIST3H2AQ7L7L0 130 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 TMEM173Q86WV6 379 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms