RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, human

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN1-223	ENST00000533079	MAP1A	P78559	2803 aa	Predicted RBP	11.62	□□□□□ -0.55
CAPN1-223	ENST00000533079	SAGE2P	A6NJ88	616 aa		11.62	□□□□□ -0.55
CAPN1-223	ENST00000533079		E7EVH7	732 aa		11.62	□□□□□ -0.55
CAPN1-223	ENST00000533079	RDH16	O75452	317 aa		11.62	□□□□□ -0.55
CAPN1-223	ENST00000533079	FH	P07954	510 aa		11.62	□□□□□ -0.55
CAPN1-223	ENST00000533079	ACVR2A	P27037	513 aa		11.62	□□□□□ -0.55
CAPN1-223	ENST00000533079	ST13	P50502	369 aa	Known RBP	11.62	□□□□□ -0.55
CAPN1-223	ENST00000533079	DGKQ	P52824	942 aa		11.62	□□□□□ -0.55
CAPN1-223	ENST00000533079	SNRPN	P63162	240 aa	Known RBP	11.62	□□□□□ -0.55
CAPN1-223	ENST00000533079	SLC7A5	Q01650	507 aa		11.62	□□□□□ -0.55
CAPN1-223	ENST00000533079	DR1	Q01658	176 aa		11.62	□□□□□ -0.55
CAPN1-223	ENST00000533079	GUCY2D	Q02846	1103 aa		11.62	□□□□□ -0.55
CAPN1-223	ENST00000533079	HERC3	Q15034	1050 aa		11.62	□□□□□ -0.55
CAPN1-223	ENST00000533079	TYSND1	Q2T9J0	566 aa		11.62	□□□□□ -0.55
CAPN1-223	ENST00000533079	PCID2	Q5JVF3	399 aa		11.62	□□□□□ -0.55
CAPN1-223	ENST00000533079	THEMIS2	Q5TEJ8	643 aa		11.62	□□□□□ -0.55
CAPN1-223	ENST00000533079	DUPD1	Q68J44	220 aa		11.62	□□□□□ -0.55
CAPN1-223	ENST00000533079	MRNIP	Q6NTE8	343 aa		11.62	□□□□□ -0.55
CAPN1-223	ENST00000533079	AADACL2	Q6P093	401 aa		11.62	□□□□□ -0.55
CAPN1-223	ENST00000533079	ARSK	Q6UWY0	536 aa		11.62	□□□□□ -0.55
CAPN1-223	ENST00000533079	B3GNT6	Q6ZMB0	384 aa		11.62	□□□□□ -0.55
CAPN1-223	ENST00000533079	QSOX2	Q6ZRP7	698 aa		11.62	□□□□□ -0.55
CAPN1-223	ENST00000533079	PDSS2	Q86YH6	399 aa		11.62	□□□□□ -0.55
CAPN1-223	ENST00000533079	PLD3	Q8IV08	490 aa		11.62	□□□□□ -0.55
CAPN1-223	ENST00000533079	CYP4Z2P	Q8N1L4	340 aa		11.62	□□□□□ -0.55
CAPN1-223	ENST00000533079	KIF2B	Q8N4N8	673 aa		11.62	□□□□□ -0.55
CAPN1-223	ENST00000533079	SLC35B2	Q8TB61	432 aa		11.62	□□□□□ -0.55
CAPN1-223	ENST00000533079	GRK7	Q8WTQ7	553 aa		11.62	□□□□□ -0.55
CAPN1-223	ENST00000533079	TSLP	Q969D9	159 aa		11.62	□□□□□ -0.55
CAPN1-223	ENST00000533079	TM4SF19	Q96DZ7	209 aa		11.62	□□□□□ -0.55
CAPN1-223	ENST00000533079	BIRC8	Q96P09	236 aa		11.62	□□□□□ -0.55
CAPN1-223	ENST00000533079	GPATCH1	Q9BRR8	931 aa	Known RBP	11.62	□□□□□ -0.55
CAPN1-223	ENST00000533079	TREX1	Q9NSU2	369 aa		11.62	□□□□□ -0.55
CAPN1-223	ENST00000533079	B4GALT7	Q9UBV7	327 aa		11.62	□□□□□ -0.55
CAPN1-223	ENST00000533079	DRG1	Q9Y295	367 aa	Known RBP	11.62	□□□□□ -0.55
CAPN1-223	ENST00000533079	PLEKHA6	Q9Y2H5	1048 aa		11.62	□□□□□ -0.55
CAPN1-223	ENST00000533079	FLNA	P21333	2647 aa	Known RBP	11.62	□□□□□ -0.55
CAPN1-223	ENST00000533079	NSD1	Q96L73	2696 aa	Predicted RBP	11.62	□□□□□ -0.55
CAPN1-223	ENST00000533079	PHF3	Q92576	2039 aa	Known RBP	11.61	□□□□□ -0.55
CAPN1-223	ENST00000533079	OR2W5	A6NFC9	320 aa		11.61	□□□□□ -0.55
CAPN1-223	ENST00000533079		E5RI56	91 aa		11.61	□□□□□ -0.55
CAPN1-223	ENST00000533079		H7BY64	318 aa		11.61	□□□□□ -0.55
CAPN1-223	ENST00000533079	AP3B1	O00203	1094 aa		11.61	□□□□□ -0.55
CAPN1-223	ENST00000533079	NIPSNAP2	O75323	286 aa		11.61	□□□□□ -0.55
CAPN1-223	ENST00000533079	CDC123	O75794	336 aa	Predicted RBP	11.61	□□□□□ -0.55
CAPN1-223	ENST00000533079	RAF1	P04049	648 aa		11.61	□□□□□ -0.55
CAPN1-223	ENST00000533079	STIP1	P31948	543 aa	Known RBP	11.61	□□□□□ -0.55
CAPN1-223	ENST00000533079	KIR2DL3	P43628	341 aa		11.61	□□□□□ -0.55
CAPN1-223	ENST00000533079	TERF2	Q15554	542 aa		11.61	□□□□□ -0.55
CAPN1-223	ENST00000533079	KLHL38	Q2WGJ6	581 aa		11.61	□□□□□ -0.55
CAPN1-223	ENST00000533079	TTLL9	Q3SXZ7	439 aa		11.61	□□□□□ -0.55
CAPN1-223	ENST00000533079	CCDC137	Q6PK04	289 aa	Known RBP	11.61	□□□□□ -0.55
CAPN1-223	ENST00000533079	KIAA0408	Q6ZU52	694 aa		11.61	□□□□□ -0.55
CAPN1-223	ENST00000533079	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	11.61	□□□□□ -0.55
CAPN1-223	ENST00000533079	ASPG	Q86U10	573 aa		11.61	□□□□□ -0.55
CAPN1-223	ENST00000533079	GPALPP1	Q8IXQ4	340 aa		11.61	□□□□□ -0.55
CAPN1-223	ENST00000533079	LRRC56	Q8IYG6	542 aa	Predicted RBP	11.61	□□□□□ -0.55
CAPN1-223	ENST00000533079	ZZZ3	Q8IYH5	903 aa		11.61	□□□□□ -0.55
CAPN1-223	ENST00000533079	MREG	Q8N565	214 aa		11.61	□□□□□ -0.55
CAPN1-223	ENST00000533079	PPFIBP2	Q8ND30	876 aa		11.61	□□□□□ -0.55
CAPN1-223	ENST00000533079	ZCCHC10	Q8TBK6	192 aa		11.61	□□□□□ -0.55
CAPN1-223	ENST00000533079	LPGAT1	Q92604	370 aa		11.61	□□□□□ -0.55
CAPN1-223	ENST00000533079	TBC1D20	Q96BZ9	403 aa		11.61	□□□□□ -0.55
CAPN1-223	ENST00000533079	PEX11G	Q96HA9	241 aa		11.61	□□□□□ -0.55
CAPN1-223	ENST00000533079	PRAP1	Q96NZ9	151 aa		11.61	□□□□□ -0.55
CAPN1-223	ENST00000533079	TCF12	Q99081	682 aa		11.61	□□□□□ -0.55
CAPN1-223	ENST00000533079	TTYH2	Q9BSA4	534 aa		11.61	□□□□□ -0.55
CAPN1-223	ENST00000533079	RBCK1	Q9BYM8	510 aa		11.61	□□□□□ -0.55
CAPN1-223	ENST00000533079	PCBD2	Q9H0N5	130 aa		11.61	□□□□□ -0.55
CAPN1-223	ENST00000533079	ZDHHC11	Q9H8X9	412 aa		11.61	□□□□□ -0.55
CAPN1-223	ENST00000533079	TIMMDC1	Q9NPL8	285 aa		11.61	□□□□□ -0.55
CAPN1-223	ENST00000533079	CCDC177	Q9NQR7	707 aa	Predicted RBP	11.61	□□□□□ -0.55
CAPN1-223	ENST00000533079	TSR3	Q9UJK0	312 aa	Known RBP	11.61	□□□□□ -0.55
CAPN1-223	ENST00000533079	NAALAD2	Q9Y3Q0	740 aa		11.61	□□□□□ -0.55
CAPN1-223	ENST00000533079	HRNR	Q86YZ3	2850 aa	Predicted RBP	11.6	□□□□□ -0.55
CAPN1-223	ENST00000533079	TCRBV7S2A1N4T	A0A589	114 aa		11.6	□□□□□ -0.55
CAPN1-223	ENST00000533079		A6NNC1	897 aa		11.6	□□□□□ -0.55
CAPN1-223	ENST00000533079	WDR1	O75083	606 aa		11.6	□□□□□ -0.55
CAPN1-223	ENST00000533079	GOSR1	O95249	250 aa		11.6	□□□□□ -0.55
CAPN1-223	ENST00000533079	HEXA	P06865	529 aa		11.6	□□□□□ -0.55
CAPN1-223	ENST00000533079	CHRM3	P20309	590 aa		11.6	□□□□□ -0.55
CAPN1-223	ENST00000533079	ADSL	P30566	484 aa	Predicted RBP	11.6	□□□□□ -0.55
CAPN1-223	ENST00000533079	GRK3	P35626	688 aa		11.6	□□□□□ -0.55
CAPN1-223	ENST00000533079	RFC3	P40938	356 aa		11.6	□□□□□ -0.55
CAPN1-223	ENST00000533079	SKIV2L2	P42285	1042 aa	Known RBP	11.6	□□□□□ -0.55
CAPN1-223	ENST00000533079	DLX5	P56178	289 aa		11.6	□□□□□ -0.55
CAPN1-223	ENST00000533079	CASP8	Q14790	479 aa		11.6	□□□□□ -0.55
CAPN1-223	ENST00000533079	DEFB113	Q30KQ7	82 aa		11.6	□□□□□ -0.55
CAPN1-223	ENST00000533079	FLYWCH1	Q4VC44	716 aa		11.6	□□□□□ -0.55
CAPN1-223	ENST00000533079	NDUFAF5	Q5TEU4	345 aa		11.6	□□□□□ -0.55
CAPN1-223	ENST00000533079	SLC22A16	Q86VW1	577 aa		11.6	□□□□□ -0.55
CAPN1-223	ENST00000533079	TMEM156	Q8N614	296 aa		11.6	□□□□□ -0.55
CAPN1-223	ENST00000533079	OTUD6B	Q8N6M0	293 aa		11.6	□□□□□ -0.55
CAPN1-223	ENST00000533079	OR52N2	Q8NGI0	321 aa		11.6	□□□□□ -0.55
CAPN1-223	ENST00000533079	OR10Q1	Q8NGQ4	319 aa		11.6	□□□□□ -0.55
CAPN1-223	ENST00000533079	LRRC46	Q96FV0	321 aa		11.6	□□□□□ -0.55
CAPN1-223	ENST00000533079	DEFB126	Q9BYW3	111 aa		11.6	□□□□□ -0.55
CAPN1-223	ENST00000533079	IL22	Q9GZX6	179 aa		11.6	□□□□□ -0.55
CAPN1-223	ENST00000533079	LIME1	Q9H400	295 aa		11.6	□□□□□ -0.55
CAPN1-223	ENST00000533079	CLK4	Q9HAZ1	481 aa	Known RBP	11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms