RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 CHST10O43529 356 aa14.5□□□□□ -0.09
CPSF1-210ENST00000532935 KLK8O60259 260 aa14.5□□□□□ -0.09
CPSF1-210ENST00000532935 DNAJB6O75190 326 aa14.5□□□□□ -0.09
CPSF1-210ENST00000532935 CLEC3AO75596 197 aa14.5□□□□□ -0.09
CPSF1-210ENST00000532935 WFS1O76024 890 aa14.5□□□□□ -0.09
CPSF1-210ENST00000532935 SNRPAP09012 282 aaKnown RBP14.5□□□□□ -0.09
CPSF1-210ENST00000532935 GCAP28676 217 aa14.5□□□□□ -0.09
CPSF1-210ENST00000532935 HNRNPH1P31943 449 aaKnown RBP14.5□□□□□ -0.09
CPSF1-210ENST00000532935 CASP2P42575 452 aa14.5□□□□□ -0.09
CPSF1-210ENST00000532935 ALDH18A1P54886 795 aaKnown RBP14.5□□□□□ -0.09
CPSF1-210ENST00000532935 E2F2Q14209 437 aa14.5□□□□□ -0.09
CPSF1-210ENST00000532935 PCOLCEQ15113 449 aa14.5□□□□□ -0.09
CPSF1-210ENST00000532935 HIST2H2ACQ16777 129 aaPredicted RBP14.5□□□□□ -0.09
CPSF1-210ENST00000532935 PFKFB4Q16877 469 aa14.5□□□□□ -0.09
CPSF1-210ENST00000532935 PAGE2BQ5JRK9 111 aa14.5□□□□□ -0.09
CPSF1-210ENST00000532935 HIST2H2AA3Q6FI13 130 aa14.5□□□□□ -0.09
CPSF1-210ENST00000532935 VN1R5Q7Z5H4 357 aa14.5□□□□□ -0.09
CPSF1-210ENST00000532935 KBTBD2Q8IY47 623 aa14.5□□□□□ -0.09
CPSF1-210ENST00000532935 EIF1ADQ8N9N8 165 aaKnown RBP14.5□□□□□ -0.09
CPSF1-210ENST00000532935 GAL3ST3Q96A11 431 aa14.5□□□□□ -0.09
CPSF1-210ENST00000532935 MS4A6EQ96DS6 147 aa14.5□□□□□ -0.09
CPSF1-210ENST00000532935 MFRPQ9BY79 579 aa14.5□□□□□ -0.09
CPSF1-210ENST00000532935 ZNF700Q9H0M5 742 aa14.5□□□□□ -0.09
CPSF1-210ENST00000532935 RHBGQ9H310 441 aa14.5□□□□□ -0.09
CPSF1-210ENST00000532935 CLK4Q9HAZ1 481 aaKnown RBP14.5□□□□□ -0.09
CPSF1-210ENST00000532935 LANCL2Q9NS86 450 aa14.5□□□□□ -0.09
CPSF1-210ENST00000532935 RIC8BQ9NVN3 520 aa14.5□□□□□ -0.09
CPSF1-210ENST00000532935 CPSF2Q9P2I0 782 aaKnown RBP14.5□□□□□ -0.09
CPSF1-210ENST00000532935 LRIT2A6NDA9 550 aa14.49□□□□□ -0.09
CPSF1-210ENST00000532935 CDC123O75794 336 aaPredicted RBP14.49□□□□□ -0.09
CPSF1-210ENST00000532935 TBX6O95947 436 aaPredicted RBP14.49□□□□□ -0.09
CPSF1-210ENST00000532935 FHP07954 510 aa14.49□□□□□ -0.09
CPSF1-210ENST00000532935 RBP1P09455 135 aa14.49□□□□□ -0.09
CPSF1-210ENST00000532935 MYBL2P10244 700 aa14.49□□□□□ -0.09
CPSF1-210ENST00000532935 COL6A2P12110 1019 aa14.49□□□□□ -0.09
CPSF1-210ENST00000532935 EPB42P16452 691 aa14.49□□□□□ -0.09
CPSF1-210ENST00000532935 RHAGQ02094 409 aa14.49□□□□□ -0.09
CPSF1-210ENST00000532935 PCDH1Q08174 1060 aa14.49□□□□□ -0.09
CPSF1-210ENST00000532935 SLC29A2Q14542 456 aa14.49□□□□□ -0.09
CPSF1-210ENST00000532935 NAA30Q147X3 362 aaPredicted RBP14.49□□□□□ -0.09
CPSF1-210ENST00000532935 ERCC6LQ2NKX8 1250 aa14.49□□□□□ -0.09
CPSF1-210ENST00000532935 TSNAXIP1Q2TAA8 658 aa14.49□□□□□ -0.09
CPSF1-210ENST00000532935 LGSNQ5TDP6 509 aa14.49□□□□□ -0.09
CPSF1-210ENST00000532935 AGAP7PQ5VUJ5 663 aa14.49□□□□□ -0.09
CPSF1-210ENST00000532935 ADNP2Q6IQ32 1131 aa14.49□□□□□ -0.09
CPSF1-210ENST00000532935 JMJD6Q6NYC1 403 aaPredicted RBP14.49□□□□□ -0.09
CPSF1-210ENST00000532935 ADGRD1Q6QNK2 874 aa14.49□□□□□ -0.09
CPSF1-210ENST00000532935 IGFL3Q6UXB1 125 aa14.49□□□□□ -0.09
CPSF1-210ENST00000532935 LANCL3Q6ZV70 420 aa14.49□□□□□ -0.09
CPSF1-210ENST00000532935 CPEB2Q7Z5Q1 589 aaKnown RBP14.49□□□□□ -0.09
CPSF1-210ENST00000532935 TEX9Q8N6V9 391 aa14.49□□□□□ -0.09
CPSF1-210ENST00000532935 TBC1D20Q96BZ9 403 aa14.49□□□□□ -0.09
CPSF1-210ENST00000532935 FAR2Q96K12 515 aa14.49□□□□□ -0.09
CPSF1-210ENST00000532935 AGAP4Q96P64 663 aa14.49□□□□□ -0.09
CPSF1-210ENST00000532935 EPB41L4BQ9H329 900 aa14.49□□□□□ -0.09
CPSF1-210ENST00000532935 ZBTB20Q9HC78 741 aaPredicted RBP14.49□□□□□ -0.09
CPSF1-210ENST00000532935 C19orf25Q9UFG5 118 aaPredicted RBP14.49□□□□□ -0.09
CPSF1-210ENST00000532935 SHANK1Q9Y566 2161 aa14.49□□□□□ -0.09
CPSF1-210ENST00000532935 RELNP78509 3460 aa14.48□□□□□ -0.09
CPSF1-210ENST00000532935 FLNCQ14315 2725 aa14.48□□□□□ -0.09
CPSF1-210ENST00000532935 LRRC14BA6NHZ5 514 aa14.48□□□□□ -0.09
CPSF1-210ENST00000532935 ERI3O43414 337 aaKnown RBP14.48□□□□□ -0.09
CPSF1-210ENST00000532935 WISP1O95388 367 aa14.48□□□□□ -0.09
CPSF1-210ENST00000532935 SERPINA7P05543 415 aa14.48□□□□□ -0.09
CPSF1-210ENST00000532935 PRR35P0CG20 571 aa14.48□□□□□ -0.09
CPSF1-210ENST00000532935 JAK1P23458 1154 aa14.48□□□□□ -0.09
CPSF1-210ENST00000532935 HPDP32754 393 aaPredicted RBP14.48□□□□□ -0.09
CPSF1-210ENST00000532935 CD97P48960 835 aa14.48□□□□□ -0.09
CPSF1-210ENST00000532935 MLLT10P55197 1068 aa14.48□□□□□ -0.09
CPSF1-210ENST00000532935 BTN3A2P78410 334 aa14.48□□□□□ -0.09
CPSF1-210ENST00000532935 PCBP2Q15366 365 aaKnown RBP eCLIP14.48□□□□□ -0.09
CPSF1-210ENST00000532935 ADPRMQ3LIE5 342 aa14.48□□□□□ -0.09
CPSF1-210ENST00000532935 SLC6A19Q695T7 634 aa14.48□□□□□ -0.09
CPSF1-210ENST00000532935 ANKRD37Q7Z713 158 aa14.48□□□□□ -0.09
CPSF1-210ENST00000532935 PLPP5Q8NEB5 264 aa14.48□□□□□ -0.09
CPSF1-210ENST00000532935 TM9SF4Q92544 642 aa14.48□□□□□ -0.09
CPSF1-210ENST00000532935 UBE2E3Q969T4 207 aa14.48□□□□□ -0.09
CPSF1-210ENST00000532935 PNPLA2Q96AD5 504 aa14.48□□□□□ -0.09
CPSF1-210ENST00000532935 MTBPQ96DY7 904 aa14.48□□□□□ -0.09
CPSF1-210ENST00000532935 SCYL1Q96KG9 808 aa14.48□□□□□ -0.09
CPSF1-210ENST00000532935 TUBB6Q9BUF5 446 aa14.48□□□□□ -0.09
CPSF1-210ENST00000532935 REXO4Q9GZR2 422 aaKnown RBP14.48□□□□□ -0.09
CPSF1-210ENST00000532935 XPR1Q9UBH6 696 aa14.48□□□□□ -0.09
CPSF1-210ENST00000532935 ANGPTL3Q9Y5C1 460 aa14.48□□□□□ -0.09
CPSF1-210ENST00000532935 TNPO3Q9Y5L0 923 aaKnown RBP14.48□□□□□ -0.09
CPSF1-210ENST00000532935 IGHV3-20A0A0C4DH32 117 aa14.47□□□□□ -0.09
CPSF1-210ENST00000532935 A0A0G2JN53 185 aa14.47□□□□□ -0.09
CPSF1-210ENST00000532935 MAGEB17A8MXT2 336 aa14.47□□□□□ -0.09
CPSF1-210ENST00000532935 SEC24DO94855 1032 aaPredicted RBP14.47□□□□□ -0.09
CPSF1-210ENST00000532935 SORBS2O94875 1100 aaKnown RBP14.47□□□□□ -0.09
CPSF1-210ENST00000532935 SIX3O95343 332 aaPredicted RBP14.47□□□□□ -0.09
CPSF1-210ENST00000532935 CELA2AP08217 269 aa14.47□□□□□ -0.09
CPSF1-210ENST00000532935 RNH1P13489 461 aaKnown RBP14.47□□□□□ -0.09
CPSF1-210ENST00000532935 TNFRSF8P28908 595 aa14.47□□□□□ -0.09
CPSF1-210ENST00000532935 PLA2G16P53816 162 aa14.47□□□□□ -0.09
CPSF1-210ENST00000532935 GTF2H2Q13888 395 aa14.47□□□□□ -0.09
CPSF1-210ENST00000532935 ABRAXAS2Q15018 415 aa14.47□□□□□ -0.09
CPSF1-210ENST00000532935 NSDHLQ15738 373 aa14.47□□□□□ -0.09
CPSF1-210ENST00000532935 GRHL2Q6ISB3 625 aa14.47□□□□□ -0.09
CPSF1-210ENST00000532935 GTF2H2CQ6P1K8 395 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms