RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 SPDYAQ5MJ70 313 aa13.61□□□□□ -0.23
COL16A1-217ENST00000532877 DEPDC1Q5TB30 811 aa13.61□□□□□ -0.23
COL16A1-217ENST00000532877 TMEM214Q6NUQ4 689 aaKnown RBP13.61□□□□□ -0.23
COL16A1-217ENST00000532877 CHSY3Q70JA7 882 aa13.61□□□□□ -0.23
COL16A1-217ENST00000532877 ARHGEF39Q8N4T4 335 aa13.61□□□□□ -0.23
COL16A1-217ENST00000532877 BMPERQ8N8U9 685 aa13.61□□□□□ -0.23
COL16A1-217ENST00000532877 ZCCHC10Q8TBK6 192 aa13.61□□□□□ -0.23
COL16A1-217ENST00000532877 MS4A6EQ96DS6 147 aa13.61□□□□□ -0.23
COL16A1-217ENST00000532877 LIN37Q96GY3 246 aaPredicted RBP13.61□□□□□ -0.23
COL16A1-217ENST00000532877 PPP3R2Q96LZ3 170 aa13.61□□□□□ -0.23
COL16A1-217ENST00000532877 OR6C1Q96RD1 312 aa13.61□□□□□ -0.23
COL16A1-217ENST00000532877 OR52B2Q96RD2 323 aa13.61□□□□□ -0.23
COL16A1-217ENST00000532877 MRPL1Q9BYD6 325 aaKnown RBP13.61□□□□□ -0.23
COL16A1-217ENST00000532877 SPRTNQ9H040 489 aaPredicted RBP13.61□□□□□ -0.23
COL16A1-217ENST00000532877 KLHL31Q9H511 634 aa13.61□□□□□ -0.23
COL16A1-217ENST00000532877 AKTIPQ9H8T0 292 aa13.61□□□□□ -0.23
COL16A1-217ENST00000532877 LRTM1Q9HBL6 345 aa13.61□□□□□ -0.23
COL16A1-217ENST00000532877 TCF7L2Q9NQB0 619 aa13.61□□□□□ -0.23
COL16A1-217ENST00000532877 NMRK1Q9NWW6 199 aa13.61□□□□□ -0.23
COL16A1-217ENST00000532877 IRAK4Q9NWZ3 460 aa13.61□□□□□ -0.23
COL16A1-217ENST00000532877 C1orf109Q9NX04 203 aa13.61□□□□□ -0.23
COL16A1-217ENST00000532877 PLPP1O14494 284 aa13.6□□□□□ -0.23
COL16A1-217ENST00000532877 ERI3O43414 337 aaKnown RBP13.6□□□□□ -0.23
COL16A1-217ENST00000532877 PEX11AO75192 247 aa13.6□□□□□ -0.23
COL16A1-217ENST00000532877 OR2B3O76000 313 aa13.6□□□□□ -0.23
COL16A1-217ENST00000532877 ZNF888P0CJ79 500 aaPredicted RBP13.6□□□□□ -0.23
COL16A1-217ENST00000532877 CCL4P13236 92 aa13.6□□□□□ -0.23
COL16A1-217ENST00000532877 RAP1GDS1P52306 607 aa13.6□□□□□ -0.23
COL16A1-217ENST00000532877 ARFIP2P53365 341 aa13.6□□□□□ -0.23
COL16A1-217ENST00000532877 SNRPNP63162 240 aaKnown RBP13.6□□□□□ -0.23
COL16A1-217ENST00000532877 RPL38P63173 70 aaKnown RBP13.6□□□□□ -0.23
COL16A1-217ENST00000532877 FOXM1Q08050 763 aa13.6□□□□□ -0.23
COL16A1-217ENST00000532877 AP5B1Q2VPB7 878 aa13.6□□□□□ -0.23
COL16A1-217ENST00000532877 SPIN4Q56A73 249 aa13.6□□□□□ -0.23
COL16A1-217ENST00000532877 MANEAQ5SRI9 462 aa13.6□□□□□ -0.23
COL16A1-217ENST00000532877 NXNQ6DKJ4 435 aa13.6□□□□□ -0.23
COL16A1-217ENST00000532877 ACAD11Q709F0 780 aa13.6□□□□□ -0.23
COL16A1-217ENST00000532877 LARP4Q71RC2 724 aaKnown RBP eCLIP13.6□□□□□ -0.23
COL16A1-217ENST00000532877 UBE3DQ7Z6J8 389 aa13.6□□□□□ -0.23
COL16A1-217ENST00000532877 PIGWQ7Z7B1 504 aa13.6□□□□□ -0.23
COL16A1-217ENST00000532877 ZFAND4Q86XD8 727 aa13.6□□□□□ -0.23
COL16A1-217ENST00000532877 C1orf52Q8N6N3 182 aaKnown RBP13.6□□□□□ -0.23
COL16A1-217ENST00000532877 OR2L5Q8NG80 312 aa13.6□□□□□ -0.23
COL16A1-217ENST00000532877 ACTRT2Q8TDY3 377 aa13.6□□□□□ -0.23
COL16A1-217ENST00000532877 GAL3ST3Q96A11 431 aa13.6□□□□□ -0.23
COL16A1-217ENST00000532877 APIPQ96GX9 242 aa13.6□□□□□ -0.23
COL16A1-217ENST00000532877 C10orf90Q96M02 699 aa13.6□□□□□ -0.23
COL16A1-217ENST00000532877 CMKLR1Q99788 373 aa13.6□□□□□ -0.23
COL16A1-217ENST00000532877 C17orf62Q9BQA9 187 aa13.6□□□□□ -0.23
COL16A1-217ENST00000532877 CENPKQ9BS16 269 aa13.6□□□□□ -0.23
COL16A1-217ENST00000532877 ZNF717Q9BY31 904 aaPredicted RBP13.6□□□□□ -0.23
COL16A1-217ENST00000532877 AKAP7Q9P0M2 348 aaPredicted RBP13.6□□□□□ -0.23
COL16A1-217ENST00000532877 MRPS2Q9Y399 296 aaKnown RBP13.6□□□□□ -0.23
COL16A1-217ENST00000532877 LOXL2Q9Y4K0 774 aa13.6□□□□□ -0.23
COL16A1-217ENST00000532877 NAV2Q8IVL1 2488 aa13.59□□□□□ -0.23
COL16A1-217ENST00000532877 KNTC1P50748 2209 aa13.59□□□□□ -0.23
COL16A1-217ENST00000532877 URADA6NGE7 173 aa13.59□□□□□ -0.23
COL16A1-217ENST00000532877 B4E171 279 aa13.59□□□□□ -0.23
COL16A1-217ENST00000532877 RTCAO00442 366 aaKnown RBP13.59□□□□□ -0.23
COL16A1-217ENST00000532877 SEC22BO75396 215 aa13.59□□□□□ -0.23
COL16A1-217ENST00000532877 TSPAN7P41732 249 aa13.59□□□□□ -0.23
COL16A1-217ENST00000532877 PLA2G16P53816 162 aa13.59□□□□□ -0.23
COL16A1-217ENST00000532877 RAB8AP61006 207 aa13.59□□□□□ -0.23
COL16A1-217ENST00000532877 ACSM2AQ08AH3 577 aa13.59□□□□□ -0.23
COL16A1-217ENST00000532877 GRM7Q14831 915 aa13.59□□□□□ -0.23
COL16A1-217ENST00000532877 LSM12Q3MHD2 195 aaKnown RBP13.59□□□□□ -0.23
COL16A1-217ENST00000532877 C6orf136Q5SQH8 315 aa13.59□□□□□ -0.23
COL16A1-217ENST00000532877 ACSM2BQ68CK6 577 aa13.59□□□□□ -0.23
COL16A1-217ENST00000532877 TRIM40Q6P9F5 258 aa13.59□□□□□ -0.23
COL16A1-217ENST00000532877 CYB5D1Q6P9G0 228 aa13.59□□□□□ -0.23
COL16A1-217ENST00000532877 ABHD17CQ6PCB6 329 aa13.59□□□□□ -0.23
COL16A1-217ENST00000532877 ABHD13Q7L211 337 aa13.59□□□□□ -0.23
COL16A1-217ENST00000532877 COMMD6Q7Z4G1 85 aa13.59□□□□□ -0.23
COL16A1-217ENST00000532877 GPR135Q8IZ08 494 aa13.59□□□□□ -0.23
COL16A1-217ENST00000532877 METTL4Q8N3J2 472 aa13.59□□□□□ -0.23
COL16A1-217ENST00000532877 TTC29Q8NA56 475 aaPredicted RBP13.59□□□□□ -0.23
COL16A1-217ENST00000532877 FNDC5Q8NAU1 212 aa13.59□□□□□ -0.23
COL16A1-217ENST00000532877 OR8K5Q8NH50 307 aa13.59□□□□□ -0.23
COL16A1-217ENST00000532877 CEP70Q8NHQ1 597 aa13.59□□□□□ -0.23
COL16A1-217ENST00000532877 UTP15Q8TED0 518 aaKnown RBP13.59□□□□□ -0.23
COL16A1-217ENST00000532877 CHTF18Q8WVB6 975 aa13.59□□□□□ -0.23
COL16A1-217ENST00000532877 RGMAQ96B86 450 aa13.59□□□□□ -0.23
COL16A1-217ENST00000532877 C11orf24Q96F05 449 aaPredicted RBP13.59□□□□□ -0.23
COL16A1-217ENST00000532877 KCNC2Q96PR1 638 aa13.59□□□□□ -0.23
COL16A1-217ENST00000532877 CCDC28BQ9BUN5 200 aa13.59□□□□□ -0.23
COL16A1-217ENST00000532877 SORBS1Q9BX66 1292 aaKnown RBP13.59□□□□□ -0.23
COL16A1-217ENST00000532877 APMAPQ9HDC9 416 aa13.59□□□□□ -0.23
COL16A1-217ENST00000532877 LHX9Q9NQ69 397 aa13.59□□□□□ -0.23
COL16A1-217ENST00000532877 SERTAD3Q9UJW9 196 aa13.59□□□□□ -0.23
COL16A1-217ENST00000532877 RARRES3Q9UL19 164 aa13.59□□□□□ -0.23
COL16A1-217ENST00000532877 CCDC187A0A096LP49 1063 aa13.58□□□□□ -0.24
COL16A1-217ENST00000532877 A0A0G2JN53 185 aa13.58□□□□□ -0.24
COL16A1-217ENST00000532877 E9PBE3 544 aa13.58□□□□□ -0.24
COL16A1-217ENST00000532877 KLHL41O60662 606 aa13.58□□□□□ -0.24
COL16A1-217ENST00000532877 MED26O95402 600 aa13.58□□□□□ -0.24
COL16A1-217ENST00000532877 SMIM10L1P0DMW3 83 aa13.58□□□□□ -0.24
COL16A1-217ENST00000532877 FGF5P12034 268 aa13.58□□□□□ -0.24
COL16A1-217ENST00000532877 ALOX12P18054 663 aa13.58□□□□□ -0.24
COL16A1-217ENST00000532877 LBPP18428 481 aa13.58□□□□□ -0.24
COL16A1-217ENST00000532877 BSGP35613 385 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms