RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 PIEZO1Q92508 2521 aa11.91□□□□□ -0.5
COPB1-208ENST00000532088 LRIT2A6NDA9 550 aa11.9□□□□□ -0.5
COPB1-208ENST00000532088 MAGEB17A8MXT2 336 aa11.9□□□□□ -0.5
COPB1-208ENST00000532088 TCP11X1B4DZS4 312 aa11.9□□□□□ -0.5
COPB1-208ENST00000532088 FFAR3O14843 346 aa11.9□□□□□ -0.5
COPB1-208ENST00000532088 HDAC3O15379 428 aa11.9□□□□□ -0.5
COPB1-208ENST00000532088 GPR42O15529 346 aa11.9□□□□□ -0.5
COPB1-208ENST00000532088 RSL1D1O76021 490 aaKnown RBP11.9□□□□□ -0.5
COPB1-208ENST00000532088 TBX6O95947 436 aaPredicted RBP11.9□□□□□ -0.5
COPB1-208ENST00000532088 PDYNP01213 254 aa11.9□□□□□ -0.5
COPB1-208ENST00000532088 JMJD7P0C870 316 aa11.9□□□□□ -0.5
COPB1-208ENST00000532088 SMIM10L1P0DMW3 83 aa11.9□□□□□ -0.5
COPB1-208ENST00000532088 ALOX15P16050 662 aaPredicted RBP11.9□□□□□ -0.5
COPB1-208ENST00000532088 ID4P47928 161 aa11.9□□□□□ -0.5
COPB1-208ENST00000532088 SKP1P63208 163 aa11.9□□□□□ -0.5
COPB1-208ENST00000532088 FOXM1Q08050 763 aa11.9□□□□□ -0.5
COPB1-208ENST00000532088 TGM3Q08188 693 aa11.9□□□□□ -0.5
COPB1-208ENST00000532088 HYAL2Q12891 473 aa11.9□□□□□ -0.5
COPB1-208ENST00000532088 HERC3Q15034 1050 aa11.9□□□□□ -0.5
COPB1-208ENST00000532088 MUM1Q2TAK8 710 aa11.9□□□□□ -0.5
COPB1-208ENST00000532088 SMU1Q2TAY7 513 aa11.9□□□□□ -0.5
COPB1-208ENST00000532088 DEFB110Q30KQ9 67 aa11.9□□□□□ -0.5
COPB1-208ENST00000532088 XKR7Q5GH72 579 aa11.9□□□□□ -0.5
COPB1-208ENST00000532088 DCAF12Q5T6F0 453 aa11.9□□□□□ -0.5
COPB1-208ENST00000532088 KHDRBS2Q5VWX1 349 aaKnown RBP11.9□□□□□ -0.5
COPB1-208ENST00000532088 CLEC6AQ6EIG7 209 aa11.9□□□□□ -0.5
COPB1-208ENST00000532088 ABHD13Q7L211 337 aa11.9□□□□□ -0.5
COPB1-208ENST00000532088 SMIM10Q96HG1 83 aa11.9□□□□□ -0.5
COPB1-208ENST00000532088 LRFN5Q96NI6 719 aa11.9□□□□□ -0.5
COPB1-208ENST00000532088 ZNF317Q96PQ6 595 aaPredicted RBP11.9□□□□□ -0.5
COPB1-208ENST00000532088 KCNA7Q96RP8 456 aa11.9□□□□□ -0.5
COPB1-208ENST00000532088 ROGDIQ9GZN7 287 aa11.9□□□□□ -0.5
COPB1-208ENST00000532088 REXO4Q9GZR2 422 aaKnown RBP11.9□□□□□ -0.5
COPB1-208ENST00000532088 SAP130Q9H0E3 1048 aa11.9□□□□□ -0.5
COPB1-208ENST00000532088 POLR1BQ9H9Y6 1135 aa11.9□□□□□ -0.5
COPB1-208ENST00000532088 SLCO1B3Q9NPD5 702 aa11.9□□□□□ -0.5
COPB1-208ENST00000532088 SIRT5Q9NXA8 310 aa11.9□□□□□ -0.5
COPB1-208ENST00000532088 SLC39A1Q9NY26 324 aa11.9□□□□□ -0.5
COPB1-208ENST00000532088 ADAM29Q9UKF5 820 aa11.9□□□□□ -0.5
COPB1-208ENST00000532088 RUVBL1Q9Y265 456 aaKnown RBP11.9□□□□□ -0.5
COPB1-208ENST00000532088 CCL27Q9Y4X3 112 aa11.9□□□□□ -0.5
COPB1-208ENST00000532088 PTPRBP23467 1997 aa11.89□□□□□ -0.51
COPB1-208ENST00000532088 A0A088AWK7 358 aa11.89□□□□□ -0.51
COPB1-208ENST00000532088 CDC14CA4D256 554 aa11.89□□□□□ -0.51
COPB1-208ENST00000532088 TRPC5OSA6NMA1 111 aa11.89□□□□□ -0.51
COPB1-208ENST00000532088 P2RX6O15547 441 aa11.89□□□□□ -0.51
COPB1-208ENST00000532088 RGS14O43566 566 aa11.89□□□□□ -0.51
COPB1-208ENST00000532088 VPS4BO75351 444 aa11.89□□□□□ -0.51
COPB1-208ENST00000532088 SCELO95171 688 aa11.89□□□□□ -0.51
COPB1-208ENST00000532088 CCL4P13236 92 aa11.89□□□□□ -0.51
COPB1-208ENST00000532088 ACPPP15309 386 aa11.89□□□□□ -0.51
COPB1-208ENST00000532088 PCSK2P16519 638 aa11.89□□□□□ -0.51
COPB1-208ENST00000532088 ZNF10P21506 573 aaPredicted RBP11.89□□□□□ -0.51
COPB1-208ENST00000532088 CD82P27701 267 aa11.89□□□□□ -0.51
COPB1-208ENST00000532088 HTR6P50406 440 aa11.89□□□□□ -0.51
COPB1-208ENST00000532088 CLDN6P56747 220 aa11.89□□□□□ -0.51
COPB1-208ENST00000532088 RPS13P62277 151 aaKnown RBP11.89□□□□□ -0.51
COPB1-208ENST00000532088 CYP4F2P78329 520 aa11.89□□□□□ -0.51
COPB1-208ENST00000532088 RTP5Q14D33 572 aa11.89□□□□□ -0.51
COPB1-208ENST00000532088 ABRAXAS2Q15018 415 aa11.89□□□□□ -0.51
COPB1-208ENST00000532088 C11orf91Q3C1V1 193 aa11.89□□□□□ -0.51
COPB1-208ENST00000532088 TCHHL1Q5QJ38 904 aaPredicted RBP11.89□□□□□ -0.51
COPB1-208ENST00000532088 SAMD5Q5TGI4 173 aa11.89□□□□□ -0.51
COPB1-208ENST00000532088 RHBDD2Q6NTF9 364 aa11.89□□□□□ -0.51
COPB1-208ENST00000532088 PRMT9Q6P2P2 845 aa11.89□□□□□ -0.51
COPB1-208ENST00000532088 FIGNL1Q6PIW4 674 aa11.89□□□□□ -0.51
COPB1-208ENST00000532088 OR2L5Q8NG80 312 aa11.89□□□□□ -0.51
COPB1-208ENST00000532088 PROKR1Q8TCW9 393 aa11.89□□□□□ -0.51
COPB1-208ENST00000532088 CCT6BQ92526 530 aa11.89□□□□□ -0.51
COPB1-208ENST00000532088 MS4A6EQ96DS6 147 aa11.89□□□□□ -0.51
COPB1-208ENST00000532088 C19orf60Q96EN9 201 aa11.89□□□□□ -0.51
COPB1-208ENST00000532088 CHMP6Q96FZ7 201 aa11.89□□□□□ -0.51
COPB1-208ENST00000532088 PRR11Q96HE9 360 aaPredicted RBP11.89□□□□□ -0.51
COPB1-208ENST00000532088 MAELQ96JY0 434 aaKnown RBP11.89□□□□□ -0.51
COPB1-208ENST00000532088 KCNC2Q96PR1 638 aa11.89□□□□□ -0.51
COPB1-208ENST00000532088 MTERF1Q99551 399 aaKnown RBP11.89□□□□□ -0.51
COPB1-208ENST00000532088 TBCDQ9BTW9 1192 aa11.89□□□□□ -0.51
COPB1-208ENST00000532088 NDC1Q9BTX1 674 aa11.89□□□□□ -0.51
COPB1-208ENST00000532088 ACPTQ9BZG2 426 aa11.89□□□□□ -0.51
COPB1-208ENST00000532088 TUBB1Q9H4B7 451 aa11.89□□□□□ -0.51
COPB1-208ENST00000532088 MEAF6Q9HAF1 191 aa11.89□□□□□ -0.51
COPB1-208ENST00000532088 RIC8BQ9NVN3 520 aa11.89□□□□□ -0.51
COPB1-208ENST00000532088 PNPOQ9NVS9 261 aa11.89□□□□□ -0.51
COPB1-208ENST00000532088 AHSPQ9NZD4 102 aa11.89□□□□□ -0.51
COPB1-208ENST00000532088 VPS29Q9UBQ0 182 aa11.89□□□□□ -0.51
COPB1-208ENST00000532088 PCDHGA7Q9Y5G6 932 aa11.89□□□□□ -0.51
COPB1-208ENST00000532088 MDC1Q14676 2089 aaKnown RBP11.89□□□□□ -0.51
COPB1-208ENST00000532088 A0A1W2PNU3 283 aaPredicted RBP11.88□□□□□ -0.51
COPB1-208ENST00000532088 HYKKA2RU49 373 aa11.88□□□□□ -0.51
COPB1-208ENST00000532088 TMEM233B4DJY2 109 aa11.88□□□□□ -0.51
COPB1-208ENST00000532088 H0YIG0 161 aa11.88□□□□□ -0.51
COPB1-208ENST00000532088 PIP5K1BO14986 540 aa11.88□□□□□ -0.51
COPB1-208ENST00000532088 NVLO15381 856 aaKnown RBP11.88□□□□□ -0.51
COPB1-208ENST00000532088 CPNE3O75131 537 aaKnown RBP11.88□□□□□ -0.51
COPB1-208ENST00000532088 SCRG1O75711 98 aa11.88□□□□□ -0.51
COPB1-208ENST00000532088 ONECUT2O95948 504 aa11.88□□□□□ -0.51
COPB1-208ENST00000532088 TGFB1P01137 390 aa11.88□□□□□ -0.51
COPB1-208ENST00000532088 EIF2S1P05198 315 aaKnown RBP11.88□□□□□ -0.51
COPB1-208ENST00000532088 ALOX12P18054 663 aa11.88□□□□□ -0.51
COPB1-208ENST00000532088 SERPINB3P29508 390 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms