RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 ARL6IP6Q8N6S5 226 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 OR1M1Q8NGA1 313 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 GANCQ8TET4 914 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 CHURC1Q8WUH1 139 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 ZFPM2Q8WW38 1151 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 CELF6Q96J87 481 aaKnown RBP7.83□□□□□ -1.16
CSDE1-214ENST00000530886 TBATAQ96M53 351 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 COQ10AQ96MF6 247 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 ATOH8Q96SQ7 321 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 MNTQ99583 582 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 SLC29A3Q9BZD2 475 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 IKZF5Q9H5V7 419 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 B3GAT2Q9NPZ5 323 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 ZNF275Q9NSD4 429 aaPredicted RBP7.83□□□□□ -1.16
CSDE1-214ENST00000530886 SLC25A37Q9NYZ2 338 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 PFDN2Q9UHV9 154 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 NEU3Q9UQ49 428 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 AAR2Q9Y312 384 aaKnown RBP7.83□□□□□ -1.16
CSDE1-214ENST00000530886 DERAQ9Y315 318 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 ASB1Q9Y576 335 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 AP1M2Q9Y6Q5 423 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 WNT9AO14904 365 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 DHFRP00374 187 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 FABP3P05413 133 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 LRIF1Q5T3J3 769 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 HACD4Q5VWC8 232 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 ELP2Q6IA86 826 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 ERICH5Q6P6B1 374 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 RAB11FIP2Q7L804 512 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 SHFQ7M4L6 423 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 NKAIN4Q8IVV8 208 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 C12orf29Q8N999 325 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 ATG16L2Q8NAA4 619 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 MYO19Q96H55 970 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 RNF32Q9H0A6 362 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 FZD3Q9NPG1 666 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 ZNF225Q9UK10 706 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 PLCL2Q9UPR0 1127 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 PCDHGA2Q9Y5H1 932 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 G3V3Q6 166 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 KCNK1O00180 336 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 GFRA2O00451 464 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 AKAP8O43823 692 aaKnown RBP7.83□□□□□ -1.16
CSDE1-214ENST00000530886 MPZL2O60487 215 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 TPST2O60704 377 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 MLYCDO95822 493 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 HSMCR30P0CW71 290 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 FDXRP22570 491 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 POU1F1P28069 291 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 CSKP41240 450 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 AKR1D1P51857 326 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 AIF1P55008 147 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 PSMD4P55036 377 aaKnown RBP7.83□□□□□ -1.16
CSDE1-214ENST00000530886 ARHGAP15Q53QZ3 475 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 ZNF789Q5FWF6 425 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 CDKL4Q5MAI5 379 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 ANKS6Q68DC2 871 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 RNF165Q6ZSG1 346 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 RASSF6Q6ZTQ3 369 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 MIB1Q86YT6 1006 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 NPWQ8N729 165 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 IL17RCQ8NAC3 791 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 AGBL3Q8NEM8 1001 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 B3GNT7Q8NFL0 401 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 TBL1YQ9BQ87 522 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 CPPED1Q9BRF8 314 aaPredicted RBP7.83□□□□□ -1.16
CSDE1-214ENST00000530886 DLL4Q9NR61 685 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 PTPRDP23468 1912 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 KPNA3O00505 521 aaPredicted RBP7.82□□□□□ -1.16
CSDE1-214ENST00000530886 VIPP01282 170 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 S100A8P05109 93 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 HBQ1P09105 142 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 IQCF3P0C7M6 154 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 ADRA1AP35348 466 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 MED22Q15528 200 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 XKR3Q5GH77 459 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 DCAF15Q66K64 600 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 NOTUMQ6P988 496 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 BHLHB9Q6PI77 547 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 ZNF730Q6ZMV8 503 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 CHMP1BQ7LBR1 199 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 TRMT1LQ7Z2T5 733 aaKnown RBP7.82□□□□□ -1.16
CSDE1-214ENST00000530886 KRT77Q7Z794 578 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 LIX1Q8N485 282 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 ASB12Q8WXK4 309 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 NSUN5Q96P11 429 aaKnown RBP7.82□□□□□ -1.16
CSDE1-214ENST00000530886 GFM1Q96RP9 751 aaKnown RBP7.82□□□□□ -1.16
CSDE1-214ENST00000530886 THUMPD3Q9BV44 507 aaKnown RBP7.82□□□□□ -1.16
CSDE1-214ENST00000530886 SARGQ9BW04 601 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 RBCK1Q9BYM8 510 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 FN3KQ9H479 309 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 PRDM9Q9NQV7 894 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 THUMPD1Q9NXG2 353 aaKnown RBP7.82□□□□□ -1.16
CSDE1-214ENST00000530886 SSR3Q9UNL2 185 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 ZNF106Q9H2Y7 1883 aaKnown RBP7.82□□□□□ -1.16
CSDE1-214ENST00000530886 PAPPA2Q9BXP8 1791 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 IGKV6-21A0A0C4DH24 114 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 LOC102723532A0A0G2JNH3 316 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 RRN3P2A6NIE6 340 aa7.82□□□□□ -1.16
CSDE1-214ENST00000530886 LRRC72A6NJI9 287 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms