RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 RHOJQ9H4E5 214 aa19.61■□□□□ 0.73
SMPD1-204ENST00000530395 GPAMQ9HCL2 828 aa19.61■□□□□ 0.73
SMPD1-204ENST00000530395 PRDM9Q9NQV7 894 aa19.61■□□□□ 0.73
SMPD1-204ENST00000530395 MOCS1Q9NZB8 636 aa19.61■□□□□ 0.73
SMPD1-204ENST00000530395 ARHGAP10A1A4S6 786 aa19.6■□□□□ 0.73
SMPD1-204ENST00000530395 SAGE2PA6NJ88 616 aa19.6■□□□□ 0.73
SMPD1-204ENST00000530395 USP27XA6NNY8 438 aa19.6■□□□□ 0.73
SMPD1-204ENST00000530395 E7ESA3 106 aa19.6■□□□□ 0.73
SMPD1-204ENST00000530395 FAM227AF5H4B4 570 aa19.6■□□□□ 0.73
SMPD1-204ENST00000530395 MAN1A2O60476 641 aa19.6■□□□□ 0.73
SMPD1-204ENST00000530395 DNAJB6O75190 326 aa19.6■□□□□ 0.73
SMPD1-204ENST00000530395 H2AFYO75367 372 aaKnown RBP19.6■□□□□ 0.73
SMPD1-204ENST00000530395 WDR47O94967 919 aa19.6■□□□□ 0.73
SMPD1-204ENST00000530395 STXBP1P61764 594 aaKnown RBP19.6■□□□□ 0.73
SMPD1-204ENST00000530395 ALDH6A1Q02252 535 aaKnown RBP19.6■□□□□ 0.73
SMPD1-204ENST00000530395 ART3Q13508 389 aa19.6■□□□□ 0.73
SMPD1-204ENST00000530395 TSNQ15631 228 aaKnown RBP19.6■□□□□ 0.73
SMPD1-204ENST00000530395 SPINK14Q6IE38 97 aa19.6■□□□□ 0.73
SMPD1-204ENST00000530395 RPTNQ6XPR3 784 aa19.6■□□□□ 0.73
SMPD1-204ENST00000530395 RPS19BP1Q86WX3 136 aaKnown RBP19.6■□□□□ 0.73
SMPD1-204ENST00000530395 ZBED8Q8IZ13 594 aa19.6■□□□□ 0.73
SMPD1-204ENST00000530395 BBOF1Q8ND07 529 aa19.6■□□□□ 0.73
SMPD1-204ENST00000530395 TTLQ8NG68 377 aa19.6■□□□□ 0.73
SMPD1-204ENST00000530395 MARVELD3Q96A59 401 aa19.6■□□□□ 0.73
SMPD1-204ENST00000530395 CCDC120Q96HB5 630 aa19.6■□□□□ 0.73
SMPD1-204ENST00000530395 MAGED4Q96JG8 741 aa19.6■□□□□ 0.73
SMPD1-204ENST00000530395 FAR2Q96K12 515 aa19.6■□□□□ 0.73
SMPD1-204ENST00000530395 HES7Q9BYE0 225 aa19.6■□□□□ 0.73
SMPD1-204ENST00000530395 RHBGQ9H310 441 aa19.6■□□□□ 0.73
SMPD1-204ENST00000530395 CDCP1Q9H5V8 836 aa19.6■□□□□ 0.73
SMPD1-204ENST00000530395 RUBCNLQ9H714 662 aa19.6■□□□□ 0.73
SMPD1-204ENST00000530395 LRFN1Q9P244 771 aa19.6■□□□□ 0.73
SMPD1-204ENST00000530395 SH3BGRL2Q9UJC5 107 aa19.6■□□□□ 0.73
SMPD1-204ENST00000530395 ENO4A6NNW6 628 aa19.59■□□□□ 0.73
SMPD1-204ENST00000530395 SLC19A2O60779 497 aa19.59■□□□□ 0.73
SMPD1-204ENST00000530395 SMIM10L1P0DMW3 83 aa19.59■□□□□ 0.73
SMPD1-204ENST00000530395 BTG2P78543 158 aa19.59■□□□□ 0.73
SMPD1-204ENST00000530395 HYAL2Q12891 473 aa19.59■□□□□ 0.73
SMPD1-204ENST00000530395 NAA30Q147X3 362 aaPredicted RBP19.59■□□□□ 0.73
SMPD1-204ENST00000530395 KRTCAP3Q53RY4 240 aa19.59■□□□□ 0.73
SMPD1-204ENST00000530395 CREB3L4Q8TEY5 395 aa19.59■□□□□ 0.73
SMPD1-204ENST00000530395 THAP3Q8WTV1 239 aaPredicted RBP19.59■□□□□ 0.73
SMPD1-204ENST00000530395 ITLN2Q8WWU7 325 aaPredicted RBP19.59■□□□□ 0.73
SMPD1-204ENST00000530395 SMIM10Q96HG1 83 aa19.59■□□□□ 0.73
SMPD1-204ENST00000530395 GPR137Q96N19 417 aa19.59■□□□□ 0.73
SMPD1-204ENST00000530395 KLHL31Q9H511 634 aa19.59■□□□□ 0.73
SMPD1-204ENST00000530395 RNF14Q9UBS8 474 aa19.59■□□□□ 0.73
SMPD1-204ENST00000530395 KLF2Q9Y5W3 355 aaPredicted RBP19.59■□□□□ 0.73
SMPD1-204ENST00000530395 APCP25054 2843 aa19.59■□□□□ 0.73
SMPD1-204ENST00000530395 CSMD1Q96PZ7 3565 aa19.58■□□□□ 0.73
SMPD1-204ENST00000530395 TCRBV16S1A1N1A0A5B0 115 aa19.58■□□□□ 0.72
SMPD1-204ENST00000530395 CTAGE15A4D2H0 777 aa19.58■□□□□ 0.72
SMPD1-204ENST00000530395 ASPDHA6ND91 283 aa19.58■□□□□ 0.72
SMPD1-204ENST00000530395 TP73O15350 636 aa19.58■□□□□ 0.72
SMPD1-204ENST00000530395 SP1P08047 785 aa19.58■□□□□ 0.72
SMPD1-204ENST00000530395 C1GALT1C1LP0DN25 315 aa19.58■□□□□ 0.72
SMPD1-204ENST00000530395 MAOAP21397 527 aa19.58■□□□□ 0.72
SMPD1-204ENST00000530395 GSTM2P28161 218 aa19.58■□□□□ 0.72
SMPD1-204ENST00000530395 TPP2P29144 1249 aaPredicted RBP19.58■□□□□ 0.72
SMPD1-204ENST00000530395 RPL21P46778 160 aaKnown RBP19.58■□□□□ 0.72
SMPD1-204ENST00000530395 SLC6A12P48065 614 aa19.58■□□□□ 0.72
SMPD1-204ENST00000530395 ST13P50502 369 aaKnown RBP19.58■□□□□ 0.72
SMPD1-204ENST00000530395 POU4F1Q01851 419 aa19.58■□□□□ 0.72
SMPD1-204ENST00000530395 SP5Q6BEB4 398 aaPredicted RBP19.58■□□□□ 0.72
SMPD1-204ENST00000530395 SLC25A25Q6KCM7 469 aa19.58■□□□□ 0.72
SMPD1-204ENST00000530395 TMIGD1Q6UXZ0 262 aa19.58■□□□□ 0.72
SMPD1-204ENST00000530395 GALNTL5Q7Z4T8 443 aa19.58■□□□□ 0.72
SMPD1-204ENST00000530395 MRGPRGQ86SM5 289 aa19.58■□□□□ 0.72
SMPD1-204ENST00000530395 CTAGE6Q86UF2 777 aa19.58■□□□□ 0.72
SMPD1-204ENST00000530395 CEP97Q8IW35 865 aa19.58■□□□□ 0.72
SMPD1-204ENST00000530395 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.58■□□□□ 0.72
SMPD1-204ENST00000530395 KLHDC8AQ8IYD2 350 aa19.58■□□□□ 0.72
SMPD1-204ENST00000530395 KRT78Q8N1N4 520 aa19.58■□□□□ 0.72
SMPD1-204ENST00000530395 CA13Q8N1Q1 262 aa19.58■□□□□ 0.72
SMPD1-204ENST00000530395 TCAIMQ8N3R3 496 aa19.58■□□□□ 0.72
SMPD1-204ENST00000530395 KIF2BQ8N4N8 673 aa19.58■□□□□ 0.72
SMPD1-204ENST00000530395 ZNF808Q8N4W9 903 aaPredicted RBP19.58■□□□□ 0.72
SMPD1-204ENST00000530395 ANKRD49Q8WVL7 239 aa19.58■□□□□ 0.72
SMPD1-204ENST00000530395 CDKL2Q92772 493 aa19.58■□□□□ 0.72
SMPD1-204ENST00000530395 GAL3ST3Q96A11 431 aa19.58■□□□□ 0.72
SMPD1-204ENST00000530395 TSPAN17Q96FV3 270 aa19.58■□□□□ 0.72
SMPD1-204ENST00000530395 FRMD6Q96NE9 622 aa19.58■□□□□ 0.72
SMPD1-204ENST00000530395 KRT12Q99456 494 aa19.58■□□□□ 0.72
SMPD1-204ENST00000530395 CAPS2Q9BXY5 557 aa19.58■□□□□ 0.72
SMPD1-204ENST00000530395 TXNDC16Q9P2K2 825 aa19.58■□□□□ 0.72
SMPD1-204ENST00000530395 SNX24Q9Y343 169 aa19.58■□□□□ 0.72
SMPD1-204ENST00000530395 MMACHCQ9Y4U1 282 aa19.58■□□□□ 0.72
SMPD1-204ENST00000530395 PCNX1Q96RV3 2341 aa19.57■□□□□ 0.72
SMPD1-204ENST00000530395 A0A088AWK7 358 aa19.57■□□□□ 0.72
SMPD1-204ENST00000530395 IGKV3D-11A0A0A0MRZ8 115 aa19.57■□□□□ 0.72
SMPD1-204ENST00000530395 FCHO1O14526 889 aa19.57■□□□□ 0.72
SMPD1-204ENST00000530395 SLC25A12O75746 678 aa19.57■□□□□ 0.72
SMPD1-204ENST00000530395 NEURL1O76050 574 aa19.57■□□□□ 0.72
SMPD1-204ENST00000530395 ESRRAP11474 423 aaPredicted RBP19.57■□□□□ 0.72
SMPD1-204ENST00000530395 ZNF10P21506 573 aaPredicted RBP19.57■□□□□ 0.72
SMPD1-204ENST00000530395 HPDP32754 393 aaPredicted RBP19.57■□□□□ 0.72
SMPD1-204ENST00000530395 CYB561P49447 251 aa19.57■□□□□ 0.72
SMPD1-204ENST00000530395 BTN3A2P78410 334 aa19.57■□□□□ 0.72
SMPD1-204ENST00000530395 CALCOCO2Q13137 446 aa19.57■□□□□ 0.72
SMPD1-204ENST00000530395 SLBPQ14493 270 aaKnown RBP eCLIP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms