RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 NOL11Q9H8H0 719 aaKnown RBP11.98□□□□□ -0.49
CCDC90B-216ENST00000529856 ACTR8Q9H981 624 aa11.98□□□□□ -0.49
CCDC90B-216ENST00000529856 FBXL4Q9UKA2 621 aa11.98□□□□□ -0.49
CCDC90B-216ENST00000529856 PCTPQ9UKL6 214 aa11.98□□□□□ -0.49
CCDC90B-216ENST00000529856 MKL2Q9ULH7 1088 aa11.98□□□□□ -0.49
CCDC90B-216ENST00000529856 TLDC2A0PJX2 215 aa11.97□□□□□ -0.49
CCDC90B-216ENST00000529856 OR7A17O14581 309 aa11.97□□□□□ -0.49
CCDC90B-216ENST00000529856 PCDH17O14917 1159 aa11.97□□□□□ -0.49
CCDC90B-216ENST00000529856 CHST10O43529 356 aa11.97□□□□□ -0.49
CCDC90B-216ENST00000529856 KALRNO60229 2985 aa11.97□□□□□ -0.49
CCDC90B-216ENST00000529856 DLX3O60479 287 aa11.97□□□□□ -0.49
CCDC90B-216ENST00000529856 TAC1P20366 129 aa11.97□□□□□ -0.49
CCDC90B-216ENST00000529856 SERPINB1P30740 379 aa11.97□□□□□ -0.49
CCDC90B-216ENST00000529856 EFNA3P52797 238 aa11.97□□□□□ -0.49
CCDC90B-216ENST00000529856 SOX8P57073 446 aa11.97□□□□□ -0.49
CCDC90B-216ENST00000529856 BTN3A2P78410 334 aa11.97□□□□□ -0.49
CCDC90B-216ENST00000529856 TCTN3Q6NUS6 607 aa11.97□□□□□ -0.49
CCDC90B-216ENST00000529856 TMEM205Q6UW68 189 aa11.97□□□□□ -0.49
CCDC90B-216ENST00000529856 C9orf43Q8TAL5 461 aaPredicted RBP11.97□□□□□ -0.49
CCDC90B-216ENST00000529856 PEX11GQ96HA9 241 aa11.97□□□□□ -0.49
CCDC90B-216ENST00000529856 NSUN5Q96P11 429 aaKnown RBP11.97□□□□□ -0.49
CCDC90B-216ENST00000529856 OR1F2PQ96R84 312 aa11.97□□□□□ -0.49
CCDC90B-216ENST00000529856 F2RL3Q96RI0 385 aa11.97□□□□□ -0.49
CCDC90B-216ENST00000529856 MESP1Q9BRJ9 268 aa11.97□□□□□ -0.49
CCDC90B-216ENST00000529856 NTMT1Q9BV86 223 aa11.97□□□□□ -0.49
CCDC90B-216ENST00000529856 C1QTNF3Q9BXJ4 246 aa11.97□□□□□ -0.49
CCDC90B-216ENST00000529856 ROPN1BQ9BZX4 212 aaPredicted RBP11.97□□□□□ -0.49
CCDC90B-216ENST00000529856 VN1R1Q9GZP7 353 aa11.97□□□□□ -0.49
CCDC90B-216ENST00000529856 REXO4Q9GZR2 422 aaKnown RBP11.97□□□□□ -0.49
CCDC90B-216ENST00000529856 ROPN1Q9HAT0 212 aaPredicted RBP11.97□□□□□ -0.49
CCDC90B-216ENST00000529856 ZBTB26Q9HCK0 441 aa11.97□□□□□ -0.49
CCDC90B-216ENST00000529856 MLXIPLQ9NP71 852 aa11.97□□□□□ -0.49
CCDC90B-216ENST00000529856 ATP13A2Q9NQ11 1180 aa11.97□□□□□ -0.49
CCDC90B-216ENST00000529856 ADGRE2Q9UHX3 823 aa11.97□□□□□ -0.49
CCDC90B-216ENST00000529856 TSC22D4Q9Y3Q8 395 aa11.97□□□□□ -0.49
CCDC90B-216ENST00000529856 PCDHGA9Q9Y5G4 932 aaKnown RBP11.97□□□□□ -0.49
CCDC90B-216ENST00000529856 PCDHGA11Q9Y5H2 935 aa11.97□□□□□ -0.49
CCDC90B-216ENST00000529856 NUP210LQ5VU65 1888 aa11.97□□□□□ -0.49
CCDC90B-216ENST00000529856 LOC102723996A0A087X1L8 192 aa11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 A0A1W2PQ72 361 aa11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 A6NL46 340 aa11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 H0YIV9 168 aa11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 K7EM74 188 aa11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 MASP2O00187 686 aa11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 ERI3O43414 337 aaKnown RBP11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 GLRA3O75311 464 aa11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 ALOX12BO75342 701 aa11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 CLDN9O95484 217 aa11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 CYC1P08574 325 aa11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 RPS17P08708 135 aaKnown RBP11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 PCNAP12004 261 aa11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 ACPPP15309 386 aa11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 ATP5F1P24539 256 aaPredicted RBP11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 PIK3CBP42338 1070 aa11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 CCT5P48643 541 aa11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 OLR1P78380 273 aa11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 IFFO1Q0D2I5 559 aa11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 AIMP2Q13155 320 aaKnown RBP11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 CPSF6Q16630 551 aaKnown RBP eCLIP11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 TUBB8Q3ZCM7 444 aa11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 MINDY4Q4G0A6 757 aa11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 LACTB2Q53H82 288 aaPredicted RBP11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 FAAH2Q6GMR7 532 aa11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 TRIM40Q6P9F5 258 aa11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 ABHD17CQ6PCB6 329 aa11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 MYLK4Q86YV6 388 aaPredicted RBP11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 RIBC1Q8N443 379 aaPredicted RBP11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 CLEC1AQ8NC01 280 aa11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 PLPP5Q8NEB5 264 aa11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 FDCSPQ8NFU4 85 aa11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 OR2L5Q8NG80 312 aa11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 ZNF483Q8TF39 744 aaPredicted RBP11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 ATP6V1E2Q96A05 226 aa11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 TBC1D20Q96BZ9 403 aa11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 C8orf44Q96CB5 159 aa11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 FAR2Q96K12 515 aa11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 QRFPRQ96P65 431 aa11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 SLC25A23Q9BV35 468 aa11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 NPLQ9BXD5 320 aaPredicted RBP11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 MS4A8Q9BY19 250 aa11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 PRDM7Q9NQW5 492 aa11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 ZNF71Q9NQZ8 489 aaPredicted RBP11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 LANCL2Q9NS86 450 aa11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 EMCNQ9ULC0 261 aa11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 RNF11Q9Y3C5 154 aa11.96□□□□□ -0.49
CCDC90B-216ENST00000529856 BOD1L1Q8NFC6 3051 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 SMG1Q96Q15 3661 aaKnown RBP11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 SCN2AQ99250 2005 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 A0A088AWK7 358 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 A0A0G2JN53 185 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 OR2W5A6NFC9 320 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 HPP00738 406 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 TGFB1P01137 390 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 FHP07954 510 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 C8orf89P0DMQ9 161 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 COX6A1P12074 109 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 KRT4P19013 534 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 IMPDH1P20839 514 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 ZNF10P21506 573 aaPredicted RBP11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 CRHR1P34998 444 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms