RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 CARD16Q5EG05 197 aa17.25■□□□□ 0.35
LTBP3-210ENST00000528516 OTUD1Q5VV17 481 aaPredicted RBP17.25■□□□□ 0.35
LTBP3-210ENST00000528516 LAIR1Q6GTX8 287 aa17.25■□□□□ 0.35
LTBP3-210ENST00000528516 ZNF548Q8NEK5 533 aaPredicted RBP17.25■□□□□ 0.35
LTBP3-210ENST00000528516 TOR1AIP2Q8NFQ8 470 aa17.25■□□□□ 0.35
LTBP3-210ENST00000528516 PIH1D2Q8WWB5 315 aa17.25■□□□□ 0.35
LTBP3-210ENST00000528516 NUSAP1Q9BXS6 441 aaKnown RBP17.25■□□□□ 0.35
LTBP3-210ENST00000528516 OR2AG1Q9H205 316 aa17.25■□□□□ 0.35
LTBP3-210ENST00000528516 IKZF5Q9H5V7 419 aa17.25■□□□□ 0.35
LTBP3-210ENST00000528516 VNN3Q9NY84 501 aa17.25■□□□□ 0.35
LTBP3-210ENST00000528516 ABCG2Q9UNQ0 655 aa17.25■□□□□ 0.35
LTBP3-210ENST00000528516 RPLP2P05387 115 aaKnown RBP17.25■□□□□ 0.35
LTBP3-210ENST00000528516 C8AP07357 584 aa17.25■□□□□ 0.35
LTBP3-210ENST00000528516 ITGAMP11215 1152 aa17.25■□□□□ 0.35
LTBP3-210ENST00000528516 ERVPABLB-1P60509 514 aa17.25■□□□□ 0.35
LTBP3-210ENST00000528516 PM20D1Q6GTS8 502 aa17.25■□□□□ 0.35
LTBP3-210ENST00000528516 MTSS1LQ765P7 747 aa17.25■□□□□ 0.35
LTBP3-210ENST00000528516 OR8J3Q8NGG0 315 aa17.25■□□□□ 0.35
LTBP3-210ENST00000528516 FAM124BQ9H5Z6 455 aaPredicted RBP17.25■□□□□ 0.35
LTBP3-210ENST00000528516 GORASP2Q9H8Y8 452 aa17.25■□□□□ 0.35
LTBP3-210ENST00000528516 CLCA3PQ9Y6N3 262 aa17.25■□□□□ 0.35
LTBP3-210ENST00000528516 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.25■□□□□ 0.35
LTBP3-210ENST00000528516 I6L893 689 aaPredicted RBP17.25■□□□□ 0.35
LTBP3-210ENST00000528516 PLD2O14939 933 aa17.25■□□□□ 0.35
LTBP3-210ENST00000528516 CYP2A6P11509 494 aaPredicted RBP17.25■□□□□ 0.35
LTBP3-210ENST00000528516 CTNNB1P35222 781 aa17.25■□□□□ 0.35
LTBP3-210ENST00000528516 UGT2B10P36537 528 aa17.25■□□□□ 0.35
LTBP3-210ENST00000528516 FBXW4P57775 412 aa17.25■□□□□ 0.35
LTBP3-210ENST00000528516 TRIQKQ629K1 86 aa17.25■□□□□ 0.35
LTBP3-210ENST00000528516 LETMD1Q6P1Q0 360 aa17.25■□□□□ 0.35
LTBP3-210ENST00000528516 VTCN1Q7Z7D3 282 aa17.25■□□□□ 0.35
LTBP3-210ENST00000528516 SERINC5Q86VE9 423 aa17.25■□□□□ 0.35
LTBP3-210ENST00000528516 TSPYL5Q86VY4 417 aaPredicted RBP17.25■□□□□ 0.35
LTBP3-210ENST00000528516 TRIM69Q86WT6 500 aa17.25■□□□□ 0.35
LTBP3-210ENST00000528516 MS4A4AQ96JQ5 239 aa17.25■□□□□ 0.35
LTBP3-210ENST00000528516 RIPOR3Q96MK2 946 aa17.25■□□□□ 0.35
LTBP3-210ENST00000528516 RIOK2Q9BVS4 552 aaKnown RBP17.25■□□□□ 0.35
LTBP3-210ENST00000528516 TMEM248Q9NWD8 314 aa17.25■□□□□ 0.35
LTBP3-210ENST00000528516 TAS2R16Q9NYV7 291 aa17.25■□□□□ 0.35
LTBP3-210ENST00000528516 SAMD4AQ9UPU9 718 aaKnown RBP17.25■□□□□ 0.35
LTBP3-210ENST00000528516 DOCK5Q9H7D0 1870 aa17.25■□□□□ 0.35
LTBP3-210ENST00000528516 ISM1B1AKI9 464 aa17.24■□□□□ 0.35
LTBP3-210ENST00000528516 M0R129 80 aa17.24■□□□□ 0.35
LTBP3-210ENST00000528516 SYN3O14994 580 aa17.24■□□□□ 0.35
LTBP3-210ENST00000528516 PDE9AO76083 593 aa17.24■□□□□ 0.35
LTBP3-210ENST00000528516 CDC42P60953 191 aa17.24■□□□□ 0.35
LTBP3-210ENST00000528516 ARSIQ5FYB1 569 aa17.24■□□□□ 0.35
LTBP3-210ENST00000528516 NPAS4Q8IUM7 802 aa17.24■□□□□ 0.35
LTBP3-210ENST00000528516 UMODL1-AS1Q8N2C9 162 aa17.24■□□□□ 0.35
LTBP3-210ENST00000528516 ZNF566Q969W8 418 aa17.24■□□□□ 0.35
LTBP3-210ENST00000528516 PLAGL1Q9UM63 463 aa17.24■□□□□ 0.35
LTBP3-210ENST00000528516 MUSKO15146 869 aa17.24■□□□□ 0.35
LTBP3-210ENST00000528516 PCDHGA12O60330 932 aa17.24■□□□□ 0.35
LTBP3-210ENST00000528516 ZNF780AO75290 641 aaPredicted RBP17.24■□□□□ 0.35
LTBP3-210ENST00000528516 MYL12AP19105 171 aa17.24■□□□□ 0.35
LTBP3-210ENST00000528516 RPS3P23396 243 aaKnown RBP eCLIP17.24■□□□□ 0.355e-16■□□□□ 9.9
LTBP3-210ENST00000528516 OLR1P78380 273 aa17.24■□□□□ 0.35
LTBP3-210ENST00000528516 ST3GAL4Q11206 333 aa17.24■□□□□ 0.35
LTBP3-210ENST00000528516 GRIK2Q13002 908 aa17.24■□□□□ 0.35
LTBP3-210ENST00000528516 DEFB115Q30KQ5 88 aa17.24■□□□□ 0.35
LTBP3-210ENST00000528516 KLHL12Q53G59 568 aa17.24■□□□□ 0.35
LTBP3-210ENST00000528516 YIF1BQ5BJH7 314 aa17.24■□□□□ 0.35
LTBP3-210ENST00000528516 CPZQ66K79 652 aa17.24■□□□□ 0.35
LTBP3-210ENST00000528516 SHQ1Q6PI26 577 aaKnown RBP17.24■□□□□ 0.35
LTBP3-210ENST00000528516 CHST9Q7L1S5 443 aa17.24■□□□□ 0.35
LTBP3-210ENST00000528516 TIGD4Q8IY51 512 aa17.24■□□□□ 0.35
LTBP3-210ENST00000528516 PCNPQ8WW12 178 aaKnown RBP17.24■□□□□ 0.35
LTBP3-210ENST00000528516 COQ8BQ96D53 544 aa17.24■□□□□ 0.35
LTBP3-210ENST00000528516 MRM3Q9HC36 420 aaKnown RBP17.24■□□□□ 0.35
LTBP3-210ENST00000528516 GMFGO60234 142 aa17.24■□□□□ 0.35
LTBP3-210ENST00000528516 MTHFD2P13995 350 aa17.24■□□□□ 0.35
LTBP3-210ENST00000528516 JUNDP17535 347 aa17.24■□□□□ 0.35
LTBP3-210ENST00000528516 DNAJA1P31689 397 aaKnown RBP17.24■□□□□ 0.35
LTBP3-210ENST00000528516 NSG1P42857 185 aa17.24■□□□□ 0.35
LTBP3-210ENST00000528516 BDKRB1P46663 353 aa17.24■□□□□ 0.35
LTBP3-210ENST00000528516 CCR4P51679 360 aa17.24■□□□□ 0.35
LTBP3-210ENST00000528516 CXCR4P61073 352 aa17.24■□□□□ 0.35
LTBP3-210ENST00000528516 TLE2Q04725 743 aa17.24■□□□□ 0.35
LTBP3-210ENST00000528516 SCAPQ12770 1279 aa17.24■□□□□ 0.35
LTBP3-210ENST00000528516 FAPQ12884 760 aa17.24■□□□□ 0.35
LTBP3-210ENST00000528516 NPRL3Q12980 569 aa17.24■□□□□ 0.35
LTBP3-210ENST00000528516 SGCGQ13326 291 aa17.24■□□□□ 0.35
LTBP3-210ENST00000528516 GPR50Q13585 617 aa17.24■□□□□ 0.35
LTBP3-210ENST00000528516 PROX2Q3B8N5 592 aa17.24■□□□□ 0.35
LTBP3-210ENST00000528516 KIAA1958Q8N8K9 716 aa17.24■□□□□ 0.35
LTBP3-210ENST00000528516 FUBP1Q96AE4 644 aaKnown RBP17.24■□□□□ 0.35
LTBP3-210ENST00000528516 EGLN2Q96KS0 407 aa17.24■□□□□ 0.35
LTBP3-210ENST00000528516 AHSPQ9NZD4 102 aa17.24■□□□□ 0.35
LTBP3-210ENST00000528516 ANGPT4Q9Y264 503 aa17.24■□□□□ 0.35
LTBP3-210ENST00000528516 WNT6Q9Y6F9 365 aa17.24■□□□□ 0.35
LTBP3-210ENST00000528516 GLOD5A6NK44 160 aa17.23■□□□□ 0.35
LTBP3-210ENST00000528516 ADAM12O43184 909 aa17.23■□□□□ 0.35
LTBP3-210ENST00000528516 SMAD6O43541 496 aaKnown RBP17.23■□□□□ 0.35
LTBP3-210ENST00000528516 HLA-EP13747 358 aa17.23■□□□□ 0.35
LTBP3-210ENST00000528516 SSR2P43308 183 aa17.23■□□□□ 0.35
LTBP3-210ENST00000528516 RNF144AP50876 292 aaPredicted RBP17.23■□□□□ 0.35
LTBP3-210ENST00000528516 ANGPT1Q15389 498 aa17.23■□□□□ 0.35
LTBP3-210ENST00000528516 C5orf22Q49AR2 442 aa17.23■□□□□ 0.35
LTBP3-210ENST00000528516 GHDCQ8N2G8 530 aa17.23■□□□□ 0.35
LTBP3-210ENST00000528516 OR10G6Q8NH81 332 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms