RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 UBAP2Q5T6F2 1119 aaKnown RBP11.42□□□□□ -0.58
TRAPPC4-209ENST00000528230 MFSD4BQ5TF39 518 aa11.42□□□□□ -0.58
TRAPPC4-209ENST00000528230 PRAMEF9Q5VWM5 478 aa11.42□□□□□ -0.58
TRAPPC4-209ENST00000528230 METTL2BQ6P1Q9 378 aaKnown RBP11.42□□□□□ -0.58
TRAPPC4-209ENST00000528230 TRMT10CQ7L0Y3 403 aaKnown RBP11.42□□□□□ -0.58
TRAPPC4-209ENST00000528230 ATCAYQ86WG3 371 aa11.42□□□□□ -0.58
TRAPPC4-209ENST00000528230 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.42□□□□□ -0.58
TRAPPC4-209ENST00000528230 CNPY4Q8N129 248 aa11.42□□□□□ -0.58
TRAPPC4-209ENST00000528230 EFCAB3Q8N7B9 438 aa11.42□□□□□ -0.58
TRAPPC4-209ENST00000528230 Q8NA96 180 aa11.42□□□□□ -0.58
TRAPPC4-209ENST00000528230 OR5T3Q8NGG3 340 aa11.42□□□□□ -0.58
TRAPPC4-209ENST00000528230 PSMF1Q92530 271 aa11.42□□□□□ -0.58
TRAPPC4-209ENST00000528230 UBE2E3Q969T4 207 aa11.42□□□□□ -0.58
TRAPPC4-209ENST00000528230 GAL3ST3Q96A11 431 aa11.42□□□□□ -0.58
TRAPPC4-209ENST00000528230 GPR78Q96P69 363 aa11.42□□□□□ -0.58
TRAPPC4-209ENST00000528230 PAFAH2Q99487 392 aa11.42□□□□□ -0.58
TRAPPC4-209ENST00000528230 WDR77Q9BQA1 342 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC4-209ENST00000528230 NPLQ9BXD5 320 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC4-209ENST00000528230 KLHL31Q9H511 634 aa11.42□□□□□ -0.58
TRAPPC4-209ENST00000528230 EPS8L2Q9H6S3 715 aa11.42□□□□□ -0.58
TRAPPC4-209ENST00000528230 ZBTB20Q9HC78 741 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC4-209ENST00000528230 OPTCQ9UBM4 332 aa11.42□□□□□ -0.58
TRAPPC4-209ENST00000528230 ZNF490Q9ULM2 529 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC4-209ENST00000528230 NFU1Q9UMS0 254 aa11.42□□□□□ -0.58
TRAPPC4-209ENST00000528230 CNTRLQ7Z7A1 2325 aa11.42□□□□□ -0.58
TRAPPC4-209ENST00000528230 CPAMD8Q8IZJ3 1885 aa11.42□□□□□ -0.58
TRAPPC4-209ENST00000528230 SHANK1Q9Y566 2161 aa11.41□□□□□ -0.58
TRAPPC4-209ENST00000528230 A0A088AWK7 358 aa11.41□□□□□ -0.58
TRAPPC4-209ENST00000528230 ZNF860A6NHJ4 632 aa11.41□□□□□ -0.58
TRAPPC4-209ENST00000528230 DNAJB6O75190 326 aa11.41□□□□□ -0.58
TRAPPC4-209ENST00000528230 ABHD2P08910 425 aa11.41□□□□□ -0.58
TRAPPC4-209ENST00000528230 RBP1P09455 135 aa11.41□□□□□ -0.58
TRAPPC4-209ENST00000528230 RNH1P13489 461 aaKnown RBP11.41□□□□□ -0.58
TRAPPC4-209ENST00000528230 EPB42P16452 691 aa11.41□□□□□ -0.58
TRAPPC4-209ENST00000528230 ZNF10P21506 573 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC4-209ENST00000528230 SOX11P35716 441 aa11.41□□□□□ -0.58
TRAPPC4-209ENST00000528230 HNF4AP41235 474 aa11.41□□□□□ -0.58
TRAPPC4-209ENST00000528230 ALDH18A1P54886 795 aaKnown RBP11.41□□□□□ -0.58
TRAPPC4-209ENST00000528230 RAB8AP61006 207 aa11.41□□□□□ -0.58
TRAPPC4-209ENST00000528230 IRF9Q00978 393 aa11.41□□□□□ -0.58
TRAPPC4-209ENST00000528230 CHIT1Q13231 466 aa11.41□□□□□ -0.58
TRAPPC4-209ENST00000528230 NAA30Q147X3 362 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC4-209ENST00000528230 SETDB1Q15047 1291 aa11.41□□□□□ -0.58
TRAPPC4-209ENST00000528230 NSDHLQ15738 373 aa11.41□□□□□ -0.58
TRAPPC4-209ENST00000528230 FBXO48Q5FWF7 155 aa11.41□□□□□ -0.58
TRAPPC4-209ENST00000528230 LGSNQ5TDP6 509 aa11.41□□□□□ -0.58
TRAPPC4-209ENST00000528230 PLAG1Q6DJT9 500 aa11.41□□□□□ -0.58
TRAPPC4-209ENST00000528230 ANKRD37Q7Z713 158 aa11.41□□□□□ -0.58
TRAPPC4-209ENST00000528230 IQCKQ8N0W5 287 aa11.41□□□□□ -0.58
TRAPPC4-209ENST00000528230 SHISA5Q8N114 240 aa11.41□□□□□ -0.58
TRAPPC4-209ENST00000528230 EIF1ADQ8N9N8 165 aaKnown RBP11.41□□□□□ -0.58
TRAPPC4-209ENST00000528230 GALNT11Q8NCW6 608 aa11.41□□□□□ -0.58
TRAPPC4-209ENST00000528230 EXT2Q93063 718 aa11.41□□□□□ -0.58
TRAPPC4-209ENST00000528230 MS4A6EQ96DS6 147 aa11.41□□□□□ -0.58
TRAPPC4-209ENST00000528230 FAR2Q96K12 515 aa11.41□□□□□ -0.58
TRAPPC4-209ENST00000528230 AICDAQ9GZX7 198 aa11.41□□□□□ -0.58
TRAPPC4-209ENST00000528230 VPS11Q9H270 941 aa11.41□□□□□ -0.58
TRAPPC4-209ENST00000528230 ADGRE2Q9UHX3 823 aa11.41□□□□□ -0.58
TRAPPC4-209ENST00000528230 TMCO1Q9UM00 188 aa11.41□□□□□ -0.58
TRAPPC4-209ENST00000528230 PLAAQ9Y263 795 aa11.41□□□□□ -0.58
TRAPPC4-209ENST00000528230 ASB1Q9Y576 335 aa11.41□□□□□ -0.58
TRAPPC4-209ENST00000528230 TNPO3Q9Y5L0 923 aaKnown RBP11.41□□□□□ -0.58
TRAPPC4-209ENST00000528230 POC1B-GALNT4F8VUJ3 575 aa11.4□□□□□ -0.58
TRAPPC4-209ENST00000528230 PRMT3O60678 531 aa11.4□□□□□ -0.58
TRAPPC4-209ENST00000528230 VPS4BO75351 444 aa11.4□□□□□ -0.58
TRAPPC4-209ENST00000528230 TBX6O95947 436 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC4-209ENST00000528230 B3GALT4O96024 378 aa11.4□□□□□ -0.58
TRAPPC4-209ENST00000528230 CD22P20273 847 aa11.4□□□□□ -0.58
TRAPPC4-209ENST00000528230 SERPINB1P30740 379 aa11.4□□□□□ -0.58
TRAPPC4-209ENST00000528230 HNRNPH1P31943 449 aaKnown RBP11.4□□□□□ -0.58
TRAPPC4-209ENST00000528230 OLR1P78380 273 aa11.4□□□□□ -0.58
TRAPPC4-209ENST00000528230 BTN3A2P78410 334 aa11.4□□□□□ -0.58
TRAPPC4-209ENST00000528230 TGM3Q08188 693 aa11.4□□□□□ -0.58
TRAPPC4-209ENST00000528230 ABRAXAS2Q15018 415 aa11.4□□□□□ -0.58
TRAPPC4-209ENST00000528230 PCBP2Q15366 365 aaKnown RBP eCLIP11.4□□□□□ -0.58
TRAPPC4-209ENST00000528230 EXT1Q16394 746 aa11.4□□□□□ -0.58
TRAPPC4-209ENST00000528230 TSNAXIP1Q2TAA8 658 aa11.4□□□□□ -0.58
TRAPPC4-209ENST00000528230 QSOX2Q6ZRP7 698 aa11.4□□□□□ -0.58
TRAPPC4-209ENST00000528230 LANCL3Q6ZV70 420 aa11.4□□□□□ -0.58
TRAPPC4-209ENST00000528230 VN1R5Q7Z5H4 357 aa11.4□□□□□ -0.58
TRAPPC4-209ENST00000528230 LAS2Q8IYD9 372 aa11.4□□□□□ -0.58
TRAPPC4-209ENST00000528230 CA13Q8N1Q1 262 aa11.4□□□□□ -0.58
TRAPPC4-209ENST00000528230 SRFBP1Q8NEF9 429 aaKnown RBP11.4□□□□□ -0.58
TRAPPC4-209ENST00000528230 OR2L5Q8NG80 312 aa11.4□□□□□ -0.58
TRAPPC4-209ENST00000528230 DNAJB14Q8TBM8 379 aa11.4□□□□□ -0.58
TRAPPC4-209ENST00000528230 M1APQ8TC57 530 aa11.4□□□□□ -0.58
TRAPPC4-209ENST00000528230 BRIX1Q8TDN6 353 aaKnown RBP11.4□□□□□ -0.58
TRAPPC4-209ENST00000528230 DCAKDQ8WVC6 231 aa11.4□□□□□ -0.58
TRAPPC4-209ENST00000528230 HAS2Q92819 552 aa11.4□□□□□ -0.58
TRAPPC4-209ENST00000528230 QRFPRQ96P65 431 aa11.4□□□□□ -0.58
TRAPPC4-209ENST00000528230 LPAR4Q99677 370 aa11.4□□□□□ -0.58
TRAPPC4-209ENST00000528230 REXO4Q9GZR2 422 aaKnown RBP11.4□□□□□ -0.58
TRAPPC4-209ENST00000528230 ILKAPQ9H0C8 392 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC4-209ENST00000528230 VPS4AQ9UN37 437 aa11.4□□□□□ -0.58
TRAPPC4-209ENST00000528230 TSC22D4Q9Y3Q8 395 aa11.4□□□□□ -0.58
TRAPPC4-209ENST00000528230 EXOC1LA0A1B0GW35 172 aa11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 OR2W5A6NFC9 320 aa11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 C4orf51C9J302 202 aa11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 PSMD12O00232 456 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 ERI3O43414 337 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms