RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 TMEM106CQ9BVX2 250 aa14.71□□□□□ -0.06
USH1C-207ENST00000527720 RHBGQ9H310 441 aa14.71□□□□□ -0.06
USH1C-207ENST00000527720 TRPV4Q9HBA0 871 aa14.71□□□□□ -0.06
USH1C-207ENST00000527720 CCNB1IP1Q9NPC3 277 aa14.71□□□□□ -0.06
USH1C-207ENST00000527720 PAK1IP1Q9NWT1 392 aaPredicted RBP14.71□□□□□ -0.06
USH1C-207ENST00000527720 THAP10Q9P2Z0 257 aaPredicted RBP14.71□□□□□ -0.06
USH1C-207ENST00000527720 RAPGEFL1Q9UHV5 662 aa14.71□□□□□ -0.06
USH1C-207ENST00000527720 ICKQ9UPZ9 632 aa14.71□□□□□ -0.06
USH1C-207ENST00000527720 PLXND1Q9Y4D7 1925 aa14.7□□□□□ -0.06
USH1C-207ENST00000527720 KLHL18O94889 574 aa14.7□□□□□ -0.06
USH1C-207ENST00000527720 KRT75O95678 551 aa14.7□□□□□ -0.06
USH1C-207ENST00000527720 KLK1P06870 262 aa14.7□□□□□ -0.06
USH1C-207ENST00000527720 CXCR2P25025 360 aa14.7□□□□□ -0.06
USH1C-207ENST00000527720 SERPINB1P30740 379 aa14.7□□□□□ -0.06
USH1C-207ENST00000527720 IL1RL1Q01638 556 aa14.7□□□□□ -0.06
USH1C-207ENST00000527720 ZNF630Q2M218 657 aaPredicted RBP14.7□□□□□ -0.06
USH1C-207ENST00000527720 ANGPTL8Q6UXH0 198 aa14.7□□□□□ -0.06
USH1C-207ENST00000527720 B3GNT8Q7Z7M8 397 aa14.7□□□□□ -0.06
USH1C-207ENST00000527720 LRRTM4Q86VH4 590 aa14.7□□□□□ -0.06
USH1C-207ENST00000527720 SLC30A8Q8IWU4 369 aa14.7□□□□□ -0.06
USH1C-207ENST00000527720 C12orf76Q8N812 135 aaPredicted RBP14.7□□□□□ -0.06
USH1C-207ENST00000527720 OR5K2Q8NHB8 316 aa14.7□□□□□ -0.06
USH1C-207ENST00000527720 TFGQ92734 400 aaPredicted RBP14.7□□□□□ -0.06
USH1C-207ENST00000527720 GABARAPL3Q9BY60 117 aa14.7□□□□□ -0.06
USH1C-207ENST00000527720 PITHD1Q9GZP4 211 aaPredicted RBP14.7□□□□□ -0.06
USH1C-207ENST00000527720 PCBD2Q9H0N5 130 aa14.7□□□□□ -0.06
USH1C-207ENST00000527720 RUBCNLQ9H714 662 aa14.7□□□□□ -0.06
USH1C-207ENST00000527720 PRSS16Q9NQE7 514 aa14.7□□□□□ -0.06
USH1C-207ENST00000527720 C1GALT1Q9NS00 363 aa14.7□□□□□ -0.06
USH1C-207ENST00000527720 SPASTQ9UBP0 616 aa14.7□□□□□ -0.06
USH1C-207ENST00000527720 TBC1D3BA6NDS4 549 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 ZNF99A8MXY4 864 aaPredicted RBP14.69□□□□□ -0.06
USH1C-207ENST00000527720 PTGES3LE9PB15 166 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 IFNA14P01570 189 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 ETFAP13804 333 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 FSHRP23945 695 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 IL12RB1P42701 662 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 CSNK2BP67870 215 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 SLC35A2P78381 396 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 MC1RQ01726 317 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 MEF2AQ02078 507 aaPredicted RBP14.69□□□□□ -0.06
USH1C-207ENST00000527720 CNTN1Q12860 1018 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 NPRL3Q12980 569 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 SCARB2Q14108 478 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 MPEG1Q2M385 716 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 IFI44LQ53G44 452 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 COX20Q5RI15 118 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 SLC9B2Q86UD5 537 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 C17orf64Q86WR6 236 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 ANKRD13BQ86YJ7 626 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 PLA2G15Q8NCC3 412 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 OR5AR1Q8NGP9 310 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 TBC1D15Q8TC07 691 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 FGF13Q92913 245 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 FKBP10Q96AY3 582 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 SFXN1Q9H9B4 322 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 THSD1Q9NS62 852 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 GDE1Q9NZC3 331 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 CKAP5Q14008 2032 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 A0A1W2PRB8 838 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 A8MVJ9 347 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 GPR89AB7ZAQ6 455 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 SAP18O00422 153 aaKnown RBP14.69□□□□□ -0.06
USH1C-207ENST00000527720 TBX19O60806 448 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 BCL10O95999 233 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 GBAP04062 536 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 GPR89BP0CG08 455 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 ITGA2P17301 1181 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 DDX5P17844 614 aaKnown RBP14.69□□□□□ -0.06
USH1C-207ENST00000527720 RRM2P31350 389 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 PRIM2P49643 509 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 ENTPD1P49961 510 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 MAD2L1BPQ15013 274 aaPredicted RBP14.69□□□□□ -0.06
USH1C-207ENST00000527720 PROX2Q3B8N5 592 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 CRB2Q5IJ48 1285 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 PIP5KL1Q5T9C9 394 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 METRNLQ641Q3 311 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 ZNF852Q6ZMS4 543 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 VN1R5Q7Z5H4 357 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 ADGRD2Q7Z7M1 963 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 HEATR4Q86WZ0 1026 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 ZNF740Q8NDX6 193 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 CIDECQ96AQ7 238 aaPredicted RBP14.69□□□□□ -0.06
USH1C-207ENST00000527720 WASH6PQ9NQA3 447 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 EXD2Q9NVH0 621 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 SPATA7Q9P0W8 599 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 WARS2Q9UGM6 360 aaKnown RBP14.69□□□□□ -0.06
USH1C-207ENST00000527720 ENPP5Q9UJA9 477 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 TMEM98Q9Y2Y6 226 aa14.69□□□□□ -0.06
USH1C-207ENST00000527720 XPNPEP2O43895 674 aa14.68□□□□□ -0.06
USH1C-207ENST00000527720 EPHX1P07099 455 aa14.68□□□□□ -0.06
USH1C-207ENST00000527720 IL3P08700 152 aa14.68□□□□□ -0.06
USH1C-207ENST00000527720 CYP4B1P13584 511 aa14.68□□□□□ -0.06
USH1C-207ENST00000527720 AQP1P29972 269 aa14.68□□□□□ -0.06
USH1C-207ENST00000527720 CHI3L1P36222 383 aaPredicted RBP14.68□□□□□ -0.06
USH1C-207ENST00000527720 PXNP49023 591 aaPredicted RBP14.68□□□□□ -0.06
USH1C-207ENST00000527720 CDK3Q00526 305 aa14.68□□□□□ -0.06
USH1C-207ENST00000527720 MVKQ03426 396 aa14.68□□□□□ -0.06
USH1C-207ENST00000527720 EMX1Q04741 257 aaPredicted RBP14.68□□□□□ -0.06
USH1C-207ENST00000527720 EEF1A2Q05639 463 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms